Ctho004239.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclargus thomasi
Gene Symbol
arid5b
Assembly
GCA_026546445.1
Location
JAOTAV010000021.1:160970-172993[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-12 7.8e-09 36.1 0.0 2 89 305 379 304 379 0.88

Sequence Information

Coding Sequence
ATGATAGCCGACGTCAGCAGCAATTCGTTCTATCGGGCAGCCATTGAAAAACTTGCTCCGTCGGCGGGCTTCGAACCCGCGACCCCCGGCCATGAGGTGCTGGCCATCAACGACAAGGTGGTGGTCCGCGCGGAAGACCTGCTGAGCTGGGTGTGCGTGGGCCGCGAGTGGAGGTGGGGACTGCGCGCGGTATGGCGGGGGGACTGCGCCCCGCCCGCCCCCGCGCCTGCCTCCCCCACCGCCCCCGCGACGCCCGCCGCCCCCCACACCGCCCCCCTACATCACACCAGGCTAGACTTCAGCGACGTGGAGAAGGAGAAGAGCGCCATCACGATAGACGAGGAGTCACCAGGCGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGATACCGGGCACTGGTGGCGCGGCTCGAGGGCATCCAGGCGAGGTGGCTGCGGGACTCCCTCGTCGCCGCGCTCGGCGGGTACGCCGCACCCACTAAGAACACGCGCATACTCTACTGTAAGGACACATTCGAGTATCCCGAGCTGGAGGGTCACGAGTTCGTGTGCAATCACCTGGCGCCGAAGCTGAAGGGGCGGCCGCGAGGACGCCGGCGTCGCGCCGCTGACCGCTCGCCCGGCCGCTCGCCCGCGCGCTCAGACTCGCGGTCCAGCGACTCCGACGGACGACACACGCCAGATAACAAGACGCACAGGCGACTCTCGCTTCGGAATGGGCCTGACAAGGAGAGGGGGTTGGACAAGGAGAGAGGGCTGGACAAGGAGAGAAGGTTAGATAAAGAGAGAGGACTGGACAAGGAGAGAGGCATAGACAAGGAGAGAGGCCTAGACAAGGAGAGAGGGCTAGAAAAAGAGAGAGGGGCGGACGACGTAGTGGCAGAAAACGGGGAGGCGCGGCCGAGCCCCGAGGACGAGGCGTTCATGTCGCAGCTCATACACTTCTACCGCGACAAGAGCGACACGCTCAAGATCGCGCACACGCTTAAACACATGTCGCTGCGACTGATCTACCTGGGCGTGGTGTCGCGCGGCGGGTACGAGGCGGTCTGCCGCGACAAGCTGTGGCGACACCTCTACGCCGACCTCGGCCCGAGAGTGCGACGATTGTATGAGAGGTGCCTCCTCCCCTTCGAGAACCACGAGCGGCGACTCAGCAAGAAGTACATGAAGGGGCTGAACGGCAAGGTGGAGGAGAAGGAGCCCATCGAGGTGGGGGACTCCCCCCTTCGCGACGACAAACGCCTGCGCACCCCCTCCCCCCACCTCGACAACGAGACAGGGGAGGACATCACAGTCACGTCGAAACCGGCGGAGGAGCTCAACCGTGAGTTCCTGGACTCCCTCCCCGAGCCCGACAAGCCCGCCAAGATCTCCGTCAAGCCGGTCGAGAAACTCATAGAGCCAGGACTCAAGACGGACGCGTTCGAGGCCGACTACAAGGACGATGACAAACGGGACGGCCACGACGCACTTAAATATACCGGTAACGGTGAGAGCGGTGTCGGAGGTGCGTGGCGTGTCCCGCCCGCTCGCGCGCCTCTCGCAGACCTCGGCCCGCTCGCCGCGCTCACGGACAACCACAACGGACACGCACAGAAGAGTCGCCCGGCGGGTCGCAGTTCCCTGCGCGCGGTGCGTGTGAAGCCGGCCCGCCCCCCTCACCACCCCGCCGCGCCACACCCCGCACCCGCCCCCACCGCCGCCACGCACACCGCGCCGACGTCATCGGGCCGGCCGGGCCCCTCCCCGCCCAACAACTTCGGAATCCACCACCCGCCCCCACTCCCGCCCGCTCGTACCTCCGCTCCCCCCGCCGCCCCCGCACACAGCGACGACGACATCGTCGAGGTTCCCTACAAACCGAAGAGCCCCGAGATTATCGACCTCGACGAGTACCCGGAGAGCCCTCAGGCCGTCAAGAGGAGGAAGCTCGACATCCTGAAGGAGCGCGGGCTTGAAGTGACCGCCGTGCCGCCGGCGTGGGGCGCCGTGCCGCTGCCGGGCGCCGTGCCGATGCCGGGTGCCGTGCCGCTGCTGCCCGCGCCGCTGCTGCACCCTCTGCTGGCGCCGGCGCAGCTCTATCAGATGTACAACATCCTGCCCCCCTCGTACCCCAACGGCGCACAGGCGCCCAAGGTCATACAGGCGGTGAGCGCGTTCGGCACCGCCGGGCCCGAGAAGACCGTGTACGGCAACCCCAAGGACCCCTTCATGCCGCCGCCGCACGTGCTAGGCTGCGCGCCCCTCCGCCCGCGCCCGCTGTCCCCCCCGGCGCCCGCCCGGGAAGTGCTCGACCTCACCTGCCCGCCCTCGGACCGCGGCGCGCTCGAGATCGTGCGCGTGCCCTCCGCGCCCTCGCCCGCCGCCCCCGCTCCCCCCGCCACCGCCGCTGCGCAGAACCTAGCCAAGAACTACACGCTGCTGGATGGCAAGGCCGTGGTGGGCTCAAACCTGGAGATCACGCTAGTCGACCCGAAGGCACAGACTCCACCCAAGCAGCGGCCGCCGCAAAAGCGCAACTCGAATGGCAAGTTCGCGGCCAAAACGCCGACGCCGCCGAGGGAGCCCCGCTACCCCCCCGCGTCGCCCTCGAGCAAGCGCGCACCGCCCCCATCGGCGCCCCCGGTGCGGGACGAGTCGCCTACGGGGTCGACGGGATCGCGCGACTCCGGTTCGTCGGGCTTCCTCAACGCGTTCAAGGCGCCGGGCGGGGCGGGGACGGGGGCGGGGTTGGCGCTCGACCCGCTGTACGTGAGCTCGCTGTACGGCGGTCTGGGCGGTGGTCTGGGTGGACTGGGTGGCGGGCTGGGCGGGATGGACCAGCGGCAGCTCGCGATGTACCGTGAGTTCGTGGCGTCGCAGTTCCGCGGCTACTCGGGGTTGCTCAACATCGGCCCGCCCACCACTAAGAATTAG
Protein Sequence
MIADVSSNSFYRAAIEKLAPSAGFEPATPGHEVLAINDKVVVRAEDLLSWVCVGREWRWGLRAVWRGDCAPPAPAPASPTAPATPAAPHTAPLHHTRLDFSDVEKEKSAITIDEESPGVVVFSYPRYCRYRALVARLEGIQARWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAADRSPGRSPARSDSRSSDSDGRHTPDNKTHRRLSLRNGPDKERGLDKERGLDKERRLDKERGLDKERGIDKERGLDKERGLEKERGADDVVAENGEARPSPEDEAFMSQLIHFYRDKSDTLKIAHTLKHMSLRLIYLGVVSRGGYEAVCRDKLWRHLYADLGPRVRRLYERCLLPFENHERRLSKKYMKGLNGKVEEKEPIEVGDSPLRDDKRLRTPSPHLDNETGEDITVTSKPAEELNREFLDSLPEPDKPAKISVKPVEKLIEPGLKTDAFEADYKDDDKRDGHDALKYTGNGESGVGGAWRVPPARAPLADLGPLAALTDNHNGHAQKSRPAGRSSLRAVRVKPARPPHHPAAPHPAPAPTAATHTAPTSSGRPGPSPPNNFGIHHPPPLPPARTSAPPAAPAHSDDDIVEVPYKPKSPEIIDLDEYPESPQAVKRRKLDILKERGLEVTAVPPAWGAVPLPGAVPMPGAVPLLPAPLLHPLLAPAQLYQMYNILPPSYPNGAQAPKVIQAVSAFGTAGPEKTVYGNPKDPFMPPPHVLGCAPLRPRPLSPPAPAREVLDLTCPPSDRGALEIVRVPSAPSPAAPAPPATAAAQNLAKNYTLLDGKAVVGSNLEITLVDPKAQTPPKQRPPQKRNSNGKFAAKTPTPPREPRYPPASPSSKRAPPPSAPPVRDESPTGSTGSRDSGSSGFLNAFKAPGGAGTGAGLALDPLYVSSLYGGLGGGLGGLGGGLGGMDQRQLAMYREFVASQFRGYSGLLNIGPPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00403554;
90% Identity
-
80% Identity
-