Ctho007188.1
Basic Information
- Insect
- Cyclargus thomasi
- Gene Symbol
- JARID2
- Assembly
- GCA_026546445.1
- Location
- JAOTAV010012934.1:5829-17338[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-20 2.4e-16 60.2 0.3 6 89 774 854 771 854 0.93
Sequence Information
- Coding Sequence
- ATGAAAGCGAAGCAAGTCCATGCTCAAAGAAAATATGCTCAAGGTGCTCACATTCCGACGTCTAATCCGAGCACACCCCTGGAGAGAAGAGTCGAGACTGGAACTCAAAATACTTACAAAGTATTCTATAATAATAATGACGCCAAAAACCTCTTAGACATAGTGTCATTCAGCAACATACATCGTCATACACAACCTATAGTATTAGTCAAAAGACTGGAAAACACAACTAATGCTTTAAAAAGAGAACCACCAGCACCTAACCATAGATCAAACAAACCTATCGAAAATGGCGTTAGATCTCCCGCTAAACGTGAACCAGAAAAACCACAAGTGTTCTCGCCATCTGTTTCACTACCTTCCAAGAAGAGGCCTACAAGATCATTTAAGATGATTAAAAAGAGACTCTTGAGTAAAAAGGTTCGCCGCAGCAATAGGCTCCGCGGAAAGCCATCACCTGTGCTCAAGAAAACTATAATATTTAAGAAGAAAATTAAAGCTAAGGCTAAGATTGTTAGGACTAAGAGGATAATAAAATTATCAAAGCCACCTGCTACTGAAAGTAATGAACAAGATGCTGTGTGTCCCTCTACTGATGATGATGAACAACCACTTACCTACTTTAAAAAGAAATCTCAACAAGTATCACCAAAGGACGAAAAAGAAAAGAAGAAGCCATTGCCAATAGTCACATTAAATAGAAGAAAAAGTATTCGACGAAAATCTAATGATGCAGAACTAATACCAACACCTGATCCATCGAAGCAATCTATAAAGGAAGTAATTAATGACAAAAATGATGCTTCTACTACAGAATCCAACAATGGGTTATATTATGGAACAAATGGAATAGAAAGATGGATCTCAGAAAGTACAAAAGATATTACTAAAAATAAAGACTTCAAAGTTCCCGTCCTACCACAGAAGAAAAAGAAAATTGAGAACAGTCCAGTCACAAGAGGCAGCACTACAAAAACCACACCAAAGAATGTTTGCTCCTCTGTCAAATTTGTGTATCTTAAAGATGTGATGAACGCTCCGCAGGATGCTATTGACGGCAATTGCAATAATTGCACGCGCTGTGAAATCATAAAGAAAGTCGTGGAATTATCTAAGCTAGTCCGAGATACGCGCAAAACGACTAGAAGCAACTCTCTCGATGTCGACCCGAGCATGGACATGACAGTATCTGCATACACTAACATTCCCAGCCCACGCGTTCACGGCACCGCCATCACCCGACTAGATAAGTCTAGGACTTCTAAAGGCGAGGACAAACAAGCATTCTATATGGATCTTTTACCCGGATCGGACAAGATAGTAGAAGTATCGTGGTGCAAAATTCCCAACCGCAAAGACTCCCTAATGAGCGCGCGACTCATCTCGAAAACTAATTTAACGAACTCCGGCGACGTTACTCTCGCTAATAATGAGACGCTGCTTGACAAATTGCTTCAGCTCTATAAAGAGAAAACACACACAGAAAAACCTTCCGATAATCTAGAAGCAGCAGAAAGTAGCAAACAAAACAAGACAGAAAAAAGTGCAAATGATACTCCAAATGATAAAAATAAAAATAAAAGCGTGGAGGTAGATAAAATTAATAAGAAGACGAATAATGATAAGGCTAAAGTCTCACTTACAAACATTAAAACCACTAGCAAACCATCAAATGTAGAGAAAACATTAAATGGAGAAAAGCCTAAGCAGAATATTATCGAGAAATCAAATAATAGCGAGAAGGCAGTGGGCAAACAAGCCAATTTAGAAAAGAACACAGGCAAGCAGGCGCATACTGAAAAATCCTGTAAAGAAAAAACAAAAAATATTTCAACTACAAAACCGGCAAACGCTGAAAAGATGTCAAATAAACAAATTAAATTAGAAAAACCCATCAAACAATCAAATGTGCCAAAGAAAAACGAAAACGACATACCACTTTCTAAAATAGCTGAAGCAAAGAATGAACCTAAACCTGCACTTATAATCAAGCGCAGCTCTTCTGATAAAAGGACCATTTCTCAAGACGCCTCAACATCTGAGAGCAAAAAGAAGAAAACGGATTGTAATTTCCCGAAAGGCGTTGATCGGGCTAAGCTGGTAGACGCGCCCGTGTTCTACCCTACTGAGGCAGAGTTTACGgatccaataagCTACTTCGAAAAGGTGATGCCGATCGCGTCCCAATTCGGCATCTGCAAGGTGGTACCCCCAGCTGACTTCAAGCCACAATGTGTGCTTAGCGACACTAACCGGTTTACAGTGACGAACCAGTATATACCACGACTCTACACGCGCTGGGGACCAGCCTTCCGAGAGATGTGTGCTATACGCTCTTATTTGGCGTCGCAGAAGGTTCATTTTACTAGAGCACCATTGTTGGAGGGTCTCGAAGTGAATTTACCGAAGATGTATCACACGGTGCAACGTCTCGGCGGATTAAAAAATGTCTTCGACAAGAAGAAATGGAATCGCGTCGCTGAGGAGATGCATTTCTATCAACTGACAAATCCTAGCAAGAAGCTTGAACAAATATATGTCAAATATCTACTTCCCTACGATACACTTACCAACAGAGAGAGACAAATGAAAATCGCCGAAGTGGAACAGATGTGGCAGAAGAAGAATAAGAAAATGCTGGCGAGAGCTATTAATCCTCTCCATCGACAGAAACGTCTGCTCGGCGATTCGAGTTCGGATTCCGATTCGGATTCGGAGCCAGAGGCTGGTTCGGATTCAGACGAGGAGGTGACGTCTAGTAGCCACAACAGTGACCCGCTAGCTGAGGCCGAGGAATGTATTGTCACAGGCAGGACTATGAATTTGAATAACTTTGAGAAGGTAGCTCAAAACGCGTTCAAAATGTACACCCCTCCAAATGAAGAGCCCAACACTAAGACCATAGAGAATCTGTACTGGAAGTTGGTGCTGTTCGGAGCTGACCATGTGTGCGTCAATAGCGCGAGTGTGGACACAGGCGAGGAGGGGTATGGGTTTACTAAGAACAAGAGCAACCCTTACGGCAAACATCCGTGGAACTTGAAGATGATAAGCCAAAACACTGGTAACTTGCTCCGTCCCCTGGGCCCGGTGCTCGGTCTGACGGTCCCCACACTGCACCTCGGCATGATATTCTCTACCAGCTGCTGGCACCGCGACCCACACGCGCTACCCTGGATAGAGTACATGCACCAGGGGCCTGAAAAGATATGGTACGGTATACCGGACGAGCAGAGCGACAACTTCCGCAAGGCGGTCGAGGTGCTCTGCCCCACCGTCTGCCAGAACAAGGGCATCTGGCTGTCGTCGGACATCACCATGATACCGCCCAATATGCTGTTGGAACATGACGTCTCCCTGTCCAAGATCACGCAGAAGCCGCACGAGTTTGTTATAGTGTTCCCGAAGGCGTACTCGAGTTCTATATGCACTGGCTACACGATATCCGAGAGTGTATACTTCGCTACGCAGTCCTGGCTCACTACTATGCCCAGCGTCTTTCAAGAGTTGCGCGAGAGCTGCGAGCCGACGACGTTCGCGCTGGAGCAGCTTGTGATGAGCGTCGCTCGTGACGGGCGCGCGCCGCTTCGCGTGCTGCAGACCGCGCACGCCGCGCTCGCCGCCCTCGTCACCGCCGAGCTCGCCGCTCGCAGCGCCTTGCGCGCTATAGGACTACAGGTGACAGTTAATAAGGGTACCAAGGGTAAGAGAAGACTGATACGTCACCAGGACGAATGTGAGATTTGTCGCACCACCTTATATCTTTCTAAGGTAAAAGGTGTATTCGGCAAGCAATCGGCGCTGTGTGTGCAACACGCAATGCGCGTGCTCGTCGAAAATGAAACTGATCTCGACGACAAGAAAATAAACAAAGACAACATAGAATTAGAGATTTTCTTTACTAAGACTGAACTGGAAGAAATCGAACAGAATCTTCAAAAACGCCTATTGAGTTAA
- Protein Sequence
- MKAKQVHAQRKYAQGAHIPTSNPSTPLERRVETGTQNTYKVFYNNNDAKNLLDIVSFSNIHRHTQPIVLVKRLENTTNALKREPPAPNHRSNKPIENGVRSPAKREPEKPQVFSPSVSLPSKKRPTRSFKMIKKRLLSKKVRRSNRLRGKPSPVLKKTIIFKKKIKAKAKIVRTKRIIKLSKPPATESNEQDAVCPSTDDDEQPLTYFKKKSQQVSPKDEKEKKKPLPIVTLNRRKSIRRKSNDAELIPTPDPSKQSIKEVINDKNDASTTESNNGLYYGTNGIERWISESTKDITKNKDFKVPVLPQKKKKIENSPVTRGSTTKTTPKNVCSSVKFVYLKDVMNAPQDAIDGNCNNCTRCEIIKKVVELSKLVRDTRKTTRSNSLDVDPSMDMTVSAYTNIPSPRVHGTAITRLDKSRTSKGEDKQAFYMDLLPGSDKIVEVSWCKIPNRKDSLMSARLISKTNLTNSGDVTLANNETLLDKLLQLYKEKTHTEKPSDNLEAAESSKQNKTEKSANDTPNDKNKNKSVEVDKINKKTNNDKAKVSLTNIKTTSKPSNVEKTLNGEKPKQNIIEKSNNSEKAVGKQANLEKNTGKQAHTEKSCKEKTKNISTTKPANAEKMSNKQIKLEKPIKQSNVPKKNENDIPLSKIAEAKNEPKPALIIKRSSSDKRTISQDASTSESKKKKTDCNFPKGVDRAKLVDAPVFYPTEAEFTDPISYFEKVMPIASQFGICKVVPPADFKPQCVLSDTNRFTVTNQYIPRLYTRWGPAFREMCAIRSYLASQKVHFTRAPLLEGLEVNLPKMYHTVQRLGGLKNVFDKKKWNRVAEEMHFYQLTNPSKKLEQIYVKYLLPYDTLTNRERQMKIAEVEQMWQKKNKKMLARAINPLHRQKRLLGDSSSDSDSDSEPEAGSDSDEEVTSSSHNSDPLAEAEECIVTGRTMNLNNFEKVAQNAFKMYTPPNEEPNTKTIENLYWKLVLFGADHVCVNSASVDTGEEGYGFTKNKSNPYGKHPWNLKMISQNTGNLLRPLGPVLGLTVPTLHLGMIFSTSCWHRDPHALPWIEYMHQGPEKIWYGIPDEQSDNFRKAVEVLCPTVCQNKGIWLSSDITMIPPNMLLEHDVSLSKITQKPHEFVIVFPKAYSSSICTGYTISESVYFATQSWLTTMPSVFQELRESCEPTTFALEQLVMSVARDGRAPLRVLQTAHAALAALVTAELAARSALRAIGLQVTVNKGTKGKRRLIRHQDECEICRTTLYLSKVKGVFGKQSALCVQHAMRVLVENETDLDDKKINKDNIELEIFFTKTELEEIEQNLQKRLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00288645;
- 90% Identity
- -
- 80% Identity
- -