Cmes030214.1
Basic Information
- Insect
- Cybosia mesomella
- Gene Symbol
- nfxl1
- Assembly
- GCA_946251875.1
- Location
- CAMIUH010000961.1:60081-62552[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 7.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.014 5.2e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 19 3.1e-07 0.011 17.7 15.9 3 19 186 202 185 202 0.95 4 19 2 7.3e+04 -4.9 1.1 6 18 227 231 227 232 0.43 5 19 6.1e-07 0.022 16.7 12.6 3 19 239 255 237 255 0.92 6 19 1.3 4.8e+04 -3.5 1.8 6 10 280 284 279 284 0.89 7 19 3.7e-10 1.3e-05 27.0 13.3 1 19 290 308 290 308 0.99 8 19 4.4e-05 1.6 10.8 17.7 3 19 345 361 337 361 0.86 9 19 2 7.3e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 19 6.7e-05 2.4 10.2 20.3 1 18 395 412 395 413 0.97 11 19 2.3e-10 8.4e-06 27.6 12.7 1 19 422 440 422 440 0.99 12 19 0.082 3e+03 0.3 5.8 10 19 489 498 487 498 0.89 13 19 0.0037 1.3e+02 4.6 10.2 1 12 508 518 508 518 0.96 14 19 0.35 1.3e+04 -1.7 3.3 14 18 547 551 547 552 0.85 15 19 0.37 1.4e+04 -1.8 0.2 7 11 567 571 567 572 0.79 16 19 0.0013 49 6.0 5.1 1 11 588 598 588 599 0.97 17 19 0.0009 33 6.6 18.1 3 18 629 645 628 646 0.87 18 19 2 7.3e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 1e-05 0.38 12.8 10.0 1 15 687 700 687 706 0.93
Sequence Information
- Coding Sequence
- ATGGCGCGTAGATATCGAGATGCGGCTGCAAAGATGCAGGAAAATGTTCAAAAACATTTGGAGGGCATGAAAGAACTTTCATCTTCCGAAGACGATGAACCCTACGAATCTAGTGTTCTCGATGGTGTATTCCAGAGTTACTGGAGGGGTGGTGGAGACACGTCTATGCTAAACAGAACTAAGAATCTTCTAGAAGAAGCTATCAGCGGTCGCTCAGTAACGTGTCTCATTTGTATAAGTTCCATCAAAAGAACAGACGCAATCTGGACATGCGAACATTGTTATTCATATTTTCATTTGTCTTGCGTCCTAAAATGGGCGAACGATAGCATCAGCCTACGTAGTGAAGAGAACCATGGTCCTATTGCTGTGGTTAAACCCAAGAAAATTGAATGGTGCTGCCCAAAGTGTCGACAGTCATATTCTAAAGAGGAGATTCCTAGAAAATATCGATGTTTTTGTGGTAAAACAGATGATCCTGAGTACCATCCATGGGTCATACCCCATACATGTGGAGAAGTATGTGAAAAAAGATTATCAACTGGTGCAAATTGTAAGCATAAATGTTTACTTCTCTGCCATCCTGGTCCCTGCCCACCATGTCCACAAACAGTGAATGGAGTATGTTATTGTGAAAAAGAACGGAAAAGAGTGAGATGTAGTGCAGCCAAATGGTCTTGCGGCAAACCTTGTAAGAGAACCCTTCTGTGTAAGACTCATAAGTGTGAAAACGAATGTCATGATGGAAACTGTGCACCATGCAGCTACACTAGCATCCAAACTTGCCAGTGTGGGTCTGAAAAAGCAAAGAGGCCTTGCAATGATCCATTTTGGCAATGCAAGAAAGTATGCAACAAGTCATATTCATGTGGGTACCATAAATGCGAGAGAGTTTGCCACTCAGGTGAGTGCGGTTCTTGTCCAAATTCAGGTTTATCAACTTGCCCATGTGGAGCGAATGAACGCTTTGTACAATGCCCTGATGTTATGGAAACTTGCCTTGGTACATGTGGTAAGAAACTGGATAATTGTGAACACCATTGCCCTGAGAAATGTCATAGAGGTCTTTGTCCACCATGTCAAAGTTTGATAGAGAAAAAATGTCAGTGTTCAACGCACACAAGATCCTTGCCATGTAGTAAGGAGTTTAAATGTGAAACTAAATGTAGGGAAACCAGAGCTTGCGGTAAACATGGATGTGGACGTAAGTGTTGCAATGGGAACTGCCCACCGTGTGAGAAAATCTGTGACAAACCACTTCAATGTGGCCGTCACAAATGCATTAATATCTGTCATCGTGGTCCATGCTACCCATGCCCACTAGAAATAAAAGTATCATGTAGATGTAAAGAGACTTATGTGACAGTCCTATGTGGAAGAGAGAGACACACAAAGCCACCTAGATGCACTTTGccatgtaaaattaaatacaggTGTAATCATGTTGAGGAAAATAGGCACCGTTGCCACTTCAAGGATTGTCCACCCTGCAAAGCAATTTGTGATAAACAGTATCCAAATTGTGGACACCATTGCGAAGCTGTATGTCATTCATATGTGGCTGTAGTCTTCAAACAGGTTGAAGTACCTGCTACTCCATGGGAGGTGCAACCGCCTAAAACTAAAATGATGAGTTTAGAATGCCCTCCTTGCAATACACCTGTCCCAGTAATATGCTTTGGAGAACATGAGACTGTACAGGATCCATGTCATGCTGCTAAACGAAGATCATGTGGAAGAGCCTGTGGACGGCTACTTTCTTGCAGTAATCATAAGTGCTCTTTACAGTGTCATCTTCACCAACCTCTTCCTGAGTATCCAAATGTTAATTCAAGTTGTAGACAGTGTGACCGAGAATGTTTAGTTCCACGTCCAGAGAAGTGCACTCACAAGTGTCCAAAGGGTGCCTGCCACCCGGGTCCATGTCCTCCTTGTGAGATACTAGAAAGACTCCCTTGTCACTGTGGTGTAACAGAAATATATTTGCGTTGTCGTCAAATATCAGTTGCTACAGAAGAAGATCTATCGTGCAAGCAACAGTGCCCTAAGAATTTGGATTGCGGTCACCGTTGCCGCAATAACTGTCATTCCGGGCCTTGCGTGATCCAGATCTGTACCAAAAAAGCTAAAATACACTGCCCTTgtggtaatattaaaaaagaagctCCATGCAATGCTGTTCGTAGTGGAGAAGTTAAAATAGTATGTGATGCGACATGTGAAGCTAAGAAGATAGCAGCAAAGATTGAGAGTGAGAAAGAGAAGCAAAGATTGAAAGCTTTAGAGGAGGAGAAGAATAAGAAAGAGCTGGCTGAATATGAATGGAAATTGAGTGGTAAGAAGAAGAAATACAAAGAGAAGAGGGCAGTTGTTAATAAAGATGACCGAGGGATTTTACGGAAGTATTGGATACTGATATTGTCCGTGGTTATTGCTGTATTAGGGTCAGCATATTACGTATTTACTATATAA
- Protein Sequence
- MARRYRDAAAKMQENVQKHLEGMKELSSSEDDEPYESSVLDGVFQSYWRGGGDTSMLNRTKNLLEEAISGRSVTCLICISSIKRTDAIWTCEHCYSYFHLSCVLKWANDSISLRSEENHGPIAVVKPKKIEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPEYHPWVIPHTCGEVCEKRLSTGANCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAKWSCGKPCKRTLLCKTHKCENECHDGNCAPCSYTSIQTCQCGSEKAKRPCNDPFWQCKKVCNKSYSCGYHKCERVCHSGECGSCPNSGLSTCPCGANERFVQCPDVMETCLGTCGKKLDNCEHHCPEKCHRGLCPPCQSLIEKKCQCSTHTRSLPCSKEFKCETKCRETRACGKHGCGRKCCNGNCPPCEKICDKPLQCGRHKCINICHRGPCYPCPLEIKVSCRCKETYVTVLCGRERHTKPPRCTLPCKIKYRCNHVEENRHRCHFKDCPPCKAICDKQYPNCGHHCEAVCHSYVAVVFKQVEVPATPWEVQPPKTKMMSLECPPCNTPVPVICFGEHETVQDPCHAAKRRSCGRACGRLLSCSNHKCSLQCHLHQPLPEYPNVNSSCRQCDRECLVPRPEKCTHKCPKGACHPGPCPPCEILERLPCHCGVTEIYLRCRQISVATEEDLSCKQQCPKNLDCGHRCRNNCHSGPCVIQICTKKAKIHCPCGNIKKEAPCNAVRSGEVKIVCDATCEAKKIAAKIESEKEKQRLKALEEEKNKKELAEYEWKLSGKKKKYKEKRAVVNKDDRGILRKYWILILSVVIAVLGSAYYVFTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_00638337;
- 80% Identity
- -