Basic Information

Insect: Cybosia mesomella
Gene Symbol: -
Assembly: GCA_946251875.1
Location: CAMIUH010000970.1:144692-153239[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.058 12 8.6 1.2 1 23 107 130 107 130 0.94

2 29 0.013 2.6 10.6 0.8 2 23 156 178 155 179 0.96

3 29 0.018 3.5 10.2 3.0 2 23 201 222 200 222 0.96

4 29 0.0022 0.43 13.0 2.8 1 23 226 248 226 248 0.98

5 29 0.024 4.9 9.7 3.0 1 23 253 276 253 276 0.98

6 29 0.22 45 6.7 2.3 1 23 283 306 283 306 0.88

7 29 0.00026 0.051 16.0 0.9 2 23 314 336 313 336 0.97

8 29 0.00047 0.093 15.2 3.0 1 23 342 364 342 364 0.97

9 29 1.3e-06 0.00025 23.2 0.2 1 23 370 392 370 392 0.99

10 29 0.33 66 6.2 4.0 1 13 398 410 398 411 0.92

11 29 0.49 97 5.7 1.8 1 23 543 566 543 566 0.94

12 29 0.1 20 7.8 0.4 2 23 592 614 591 615 0.94

13 29 0.28 56 6.4 3.8 2 23 637 658 637 658 0.97

14 29 0.003 0.59 12.6 4.0 1 23 662 684 662 684 0.98

15 29 0.0023 0.45 13.0 1.4 1 23 689 712 689 712 0.98

16 29 0.25 50 6.5 0.7 1 23 719 742 719 742 0.83

17 29 0.00037 0.073 15.5 1.0 2 23 750 772 749 772 0.97

18 29 0.0025 0.5 12.8 1.2 1 23 778 800 778 800 0.97

19 29 8.6e-06 0.0017 20.6 0.7 1 23 806 828 806 828 0.99

20 29 0.017 3.3 10.3 3.6 1 19 834 852 834 852 0.97

21 29 0.0029 0.58 12.7 0.2 2 23 965 987 964 987 0.96

22 29 0.82 1.6e+02 4.9 5.5 2 23 1010 1031 1009 1031 0.97

23 29 4.3e-05 0.0085 18.4 0.0 1 23 1035 1057 1035 1057 0.98

24 29 0.074 15 8.2 3.5 1 23 1062 1085 1062 1085 0.98

25 29 0.034 6.8 9.3 0.5 2 23 1093 1115 1093 1115 0.93

26 29 0.0001 0.02 17.2 1.4 2 23 1123 1145 1123 1145 0.97

27 29 0.00063 0.13 14.7 2.5 1 23 1151 1173 1151 1173 0.97

28 29 8e-06 0.0016 20.7 1.1 1 23 1179 1201 1179 1201 0.99

29 29 0.001 0.2 14.1 2.2 1 23 1207 1230 1207 1230 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.058	12	8.6	1.2	1	23	107	130	107	130	0.94
2	29	0.013	2.6	10.6	0.8	2	23	156	178	155	179	0.96
3	29	0.018	3.5	10.2	3.0	2	23	201	222	200	222	0.96
4	29	0.0022	0.43	13.0	2.8	1	23	226	248	226	248	0.98
5	29	0.024	4.9	9.7	3.0	1	23	253	276	253	276	0.98
6	29	0.22	45	6.7	2.3	1	23	283	306	283	306	0.88
7	29	0.00026	0.051	16.0	0.9	2	23	314	336	313	336	0.97
8	29	0.00047	0.093	15.2	3.0	1	23	342	364	342	364	0.97
9	29	1.3e-06	0.00025	23.2	0.2	1	23	370	392	370	392	0.99
10	29	0.33	66	6.2	4.0	1	13	398	410	398	411	0.92
11	29	0.49	97	5.7	1.8	1	23	543	566	543	566	0.94
12	29	0.1	20	7.8	0.4	2	23	592	614	591	615	0.94
13	29	0.28	56	6.4	3.8	2	23	637	658	637	658	0.97
14	29	0.003	0.59	12.6	4.0	1	23	662	684	662	684	0.98
15	29	0.0023	0.45	13.0	1.4	1	23	689	712	689	712	0.98
16	29	0.25	50	6.5	0.7	1	23	719	742	719	742	0.83
17	29	0.00037	0.073	15.5	1.0	2	23	750	772	749	772	0.97
18	29	0.0025	0.5	12.8	1.2	1	23	778	800	778	800	0.97
19	29	8.6e-06	0.0017	20.6	0.7	1	23	806	828	806	828	0.99
20	29	0.017	3.3	10.3	3.6	1	19	834	852	834	852	0.97
21	29	0.0029	0.58	12.7	0.2	2	23	965	987	964	987	0.96
22	29	0.82	1.6e+02	4.9	5.5	2	23	1010	1031	1009	1031	0.97
23	29	4.3e-05	0.0085	18.4	0.0	1	23	1035	1057	1035	1057	0.98
24	29	0.074	15	8.2	3.5	1	23	1062	1085	1062	1085	0.98
25	29	0.034	6.8	9.3	0.5	2	23	1093	1115	1093	1115	0.93
26	29	0.0001	0.02	17.2	1.4	2	23	1123	1145	1123	1145	0.97
27	29	0.00063	0.13	14.7	2.5	1	23	1151	1173	1151	1173	0.97
28	29	8e-06	0.0016	20.7	1.1	1	23	1179	1201	1179	1201	0.99
29	29	0.001	0.2	14.1	2.2	1	23	1207	1230	1207	1230	0.96

Sequence Information

Coding Sequence: ATGCAGTTAGAATACTATAGGTACGTAGGAGGTCCTTCAGCAGTGCCATCTTCAAAAGTTTTGATTGAAGTCAAACCAGAAGAAAGTAGTTTAGATAATTCAAAAGCTAAGAAAGTTATTACAATAGCAAATAATACGAAAAGCAAAAAAGTTACTACAACACCAAGTGATTTGAGAAATGAAAAAGTTACTTCAACATCTAAACAAGTCGCTCTACCACCGATCAGTAGGCAGGAAATACATAAACATCGCACTAATATAATAGAAGTGTTGCTATGCTCGAATGCTACGCCAATTAGACGCTTCGAAGATATGAGTTATCAATGCTGTTATTGTAAAGCTCAGTACGTACTGCCTGCAGATTTAAAGAATCATACATTAGAAACCCATCAAGATGTACGAAAGGCTTCTTTCATGAAAATAGGGATGGACGCGTTAGTTGTGAGGTTAGACATTACAGCACTACAGTGCAGGATTTGCAACCAAAATCTCGATACCCTGGAACTACTGATGGAGCATTTAAGAACTCTTCATCACAAAACAATTCACACTGACATAAAAAACCATATGACTCCATTTCAATTTGCTACAGAAACGTTACAATGTTGCATCTGTAACAATACTTTTAGTAAATTCAAAATGCTCCTTGAACATATGAACTTGCATTACCGAAACTACATTTGCAAGTTGTGTGATGTAGGCTTCACTACTATCTGTAGTCTCAGAAGTCATATGCATGTTCACAGCACCGGCCCGTTCAAATGTGATTACTGTTCACAAGTATTTGGAACTACTACTAAGAAAAAGAACCATGAAAGAACAACGCATTTACCTAAGTTTGATCTATACAAATGCAGGATATGCAATGAAACCTTCCACCAATACAGGTTCAAGGAGGCACATTTAGTGTCAATACACGGATTGAAAATGCCGACATCTAAATGTAAAGCTTGTAATAAAGTCTTCAATACTAGACAAGCTTTAAGCATTCATATCAAAAGAGATCATTTGATGGAGAGAAAACATAAGTGCCCAGATTGTGATATGAGCTTCTTCAAAGCTAGAGACCTCGATCATCATATGGTCAAACATACGAAAGCACGAACTTATAAATGCACTGTTTGTCCAAAAGCTTTTGGCAGAGCACCTTCACTAAGAAATCATATGAAGATTCATAACAACATAAGACGTTTTAAATGTGAACACTGTGGACAGACGTTTGTGCAGAAATGTCGTTCAGCAGTGCCCTCTTTGAAAGTTTTGATTGAAGTTAAGCCAGAAGACAGTAGTTTAGATCAATTAAAATTCAAGAAAGTTACTACAATATCAAGtaattcaaaaaacaaaaaagttactACAATATCAAGTggtttgaaaaacaaaaaagtaactacaatatcaaataattcGAAAAGTAAGAAAGTTATTACAATATCAAGTGGCTTGCAAAACGAGAAAGATACTACAACATCAAGTGATTTGGAAAACGAAAAAGTTACTTCAACATCTAAACAAGTCCCTCTAGTACCCATCAGCAGGCAGGAAATACAAAAACATCGGACTAATATCATAGAAGTGTTGCTATGTTCGAACGCTACGCCTATTAGACGCTTCGAAGATATGGGTTACCAGTGCTGTTATTGCAAAGATCAATACGTACTCCCTGCAGATTTAAAGAAACATACGTTAGAGACACATCAAGACGTACGAAAGGCTTGTTTTATGAAGATGGGGATGGAGACGTTAGTCGTGAGATTAGACACTACAGCTCTACAGTGCAGGATCTGCAAGCAGAGTCTCGACACCCTCGAACTACTGTTGGAACATTTAAAAGCTGTTCATCACAAAACAATTTACACTGACATAAAAAGTCACATGACTCCATTTCAATTTATTACGGAAACGCCACAATGTTGCATTTGCAAGAATACTTTTAGTAAATTCAAAATGCTACTAGAACATTTGAACTTACATTACCGAAATTACATTTGCGAGCTCTGTGATACAGGCTTTACGACTATCTGTAGTTTCAGAAAGCATATGCATGTACACAATACTGGAACGTTCAAATGTGATAACTGTTCACGAGTATTTGAAACCGCTGCTAAGAAAAAAACGCATGAAAGAACAATGCATTTGCCTAAGTTTGATCTATACAAGTGCAGAATATGCAATGAAACATTCGAAGAGTACAGGTTCAAAGAGGCACACTTAGTGTCAATGCATGGATTGAAACTGCCTACATCTAAATGTAAAGCATGTAATAAAATCTTTAAGAACAGGCAAGCTTTAAGCGTTCATATCAAAAGAGACCACTTAATGGAGAGAAGACATAAGTGCTTAGAGTGTGATATGAGTTTCTTCAAAGCAATAGAACTCGATCGTCATATGGTAAAACATACGAAAGCACGAACTTATAAATGCACTGTTTGTTCAAAGGCTTTTGGCAGAGCATATACACTGAAAGAGCATTTGAAAATTCACAACAACATAAGACGTTTTAAATGTGAACACTGTGGGCAGGCATTTGTGCAGAAATGTAGTTGGAAGAgcCATCCAGTAGTCAAAGCGGATAGAAACTATGAACCAGATGAGTCAATAGATGAAGAAATCATGCCTGTATCACGAGACGCTTCACTTATGGCAAGGAAAATAACGGATCTATTTAAGCATAGGAccaatataaaagaaattatgCTTTGGTCAAACGCTACGCCCATAAGGCGCGTCGGAGATATGGGTTATGTGTGTTGTTACTGCAACGATCAGTTCCTTGAGCCTGAAAAACTAAAGAAACACTCTCTCGAAACCCACCAAGATGTCCGTAAAGCTTTCTTTATTAAGCATTTGTCTAAAGACAGGTTTATTGTTAAATTAGATATTACCGCACTACGATGCAAGATCTGTGATCAATCTATTAATACCTTAGATGAGTTACTGGAGCATCTGAAAGTTAAACATCAGAAAACTATTTACACAGACATTAGTAGTCATATCATCCCATTTAAGTTCTCTACAGAGACACTCCAATGTTGTATTTGCACGAGTACCTTCGATAAGTTCAGAATGTTACACGAACATATGAGCACGCATTACAGAAATTACATCTGCGATGTTTGCGACGCAGGTTTTGTAAATAATAGTGGTCTTCAAACTCACATGACTGTACATAACACCGGTATTTTCAAGTGCGTTCATTGCACTCAAATTTTTGACAAACTTAGTAAGAAGAaagcccatgaaagaacaaTGCATTCTCTGAAAAAAAACCATCGCAAATGCGGATATTGTAATGAGTCCTTCAGTGATTTCAGATTGAAAGAAGCACATTTAGTGAAAATGCATGGACTAAAAGTGCCTATACCTAAGTGTCAAGCCTGCGACAAAGTTTTTAGGAGCAGAAAATCGTTGAGCCTCCATATTCGGAGAGATCATTTACTGGAAAGACTTCACAAATGCTCCGAATGCGATATGAGCTTCTTTGAATCAACTACACTAAAAATTCACATGGTGAAACATACTGGAGTACGTTCTTATAAATGTCATATTTGCTCGAAGGCTTTTGGTAGACCAAATGTATTGAGGCAGCATATGAACATACACGATGAGGCAAAGCAGTTCAAATGTGACCAATGTGAGAAAGTATTCGCACAAAAATGCGCCTGGAAGAGTCATTTGACAATTAAACACGGAAAGAATGTCTGA
Protein Sequence: MQLEYYRYVGGPSAVPSSKVLIEVKPEESSLDNSKAKKVITIANNTKSKKVTTTPSDLRNEKVTSTSKQVALPPISRQEIHKHRTNIIEVLLCSNATPIRRFEDMSYQCCYCKAQYVLPADLKNHTLETHQDVRKASFMKIGMDALVVRLDITALQCRICNQNLDTLELLMEHLRTLHHKTIHTDIKNHMTPFQFATETLQCCICNNTFSKFKMLLEHMNLHYRNYICKLCDVGFTTICSLRSHMHVHSTGPFKCDYCSQVFGTTTKKKNHERTTHLPKFDLYKCRICNETFHQYRFKEAHLVSIHGLKMPTSKCKACNKVFNTRQALSIHIKRDHLMERKHKCPDCDMSFFKARDLDHHMVKHTKARTYKCTVCPKAFGRAPSLRNHMKIHNNIRRFKCEHCGQTFVQKCRSAVPSLKVLIEVKPEDSSLDQLKFKKVTTISSNSKNKKVTTISSGLKNKKVTTISNNSKSKKVITISSGLQNEKDTTTSSDLENEKVTSTSKQVPLVPISRQEIQKHRTNIIEVLLCSNATPIRRFEDMGYQCCYCKDQYVLPADLKKHTLETHQDVRKACFMKMGMETLVVRLDTTALQCRICKQSLDTLELLLEHLKAVHHKTIYTDIKSHMTPFQFITETPQCCICKNTFSKFKMLLEHLNLHYRNYICELCDTGFTTICSFRKHMHVHNTGTFKCDNCSRVFETAAKKKTHERTMHLPKFDLYKCRICNETFEEYRFKEAHLVSMHGLKLPTSKCKACNKIFKNRQALSVHIKRDHLMERRHKCLECDMSFFKAIELDRHMVKHTKARTYKCTVCSKAFGRAYTLKEHLKIHNNIRRFKCEHCGQAFVQKCSWKSHPVVKADRNYEPDESIDEEIMPVSRDASLMARKITDLFKHRTNIKEIMLWSNATPIRRVGDMGYVCCYCNDQFLEPEKLKKHSLETHQDVRKAFFIKHLSKDRFIVKLDITALRCKICDQSINTLDELLEHLKVKHQKTIYTDISSHIIPFKFSTETLQCCICTSTFDKFRMLHEHMSTHYRNYICDVCDAGFVNNSGLQTHMTVHNTGIFKCVHCTQIFDKLSKKKAHERTMHSLKKNHRKCGYCNESFSDFRLKEAHLVKMHGLKVPIPKCQACDKVFRSRKSLSLHIRRDHLLERLHKCSECDMSFFESTTLKIHMVKHTGVRSYKCHICSKAFGRPNVLRQHMNIHDEAKQFKCDQCEKVFAQKCAWKSHLTIKHGKNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -