Basic Information

Transcription Factor Domain

TF Family: GTF2I
Domain: GTF2I domain
PFAM: PF02946
TF Group: Other Alpha-Helix Group
Description: This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.2 4.4e+04 -3.2 0.0 27 43 47 63 44 64 0.56

2 5 0.00031 11 8.4 0.0 5 37 93 125 91 129 0.88

3 5 0.0041 1.5e+02 4.7 0.0 12 37 137 162 135 166 0.93

4 5 0.0002 7.3 9.0 0.0 5 38 169 202 166 206 0.87

5 5 0.84 3.1e+04 -2.7 0.1 60 72 251 263 248 265 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.2	4.4e+04	-3.2	0.0	27	43	47	63	44	64	0.56
2	5	0.00031	11	8.4	0.0	5	37	93	125	91	129	0.88
3	5	0.0041	1.5e+02	4.7	0.0	12	37	137	162	135	166	0.93
4	5	0.0002	7.3	9.0	0.0	5	38	169	202	166	206	0.87
5	5	0.84	3.1e+04	-2.7	0.1	60	72	251	263	248	265	0.82

Coding Sequence: ATGTACGAAACTTTGACTATGATGCCGTTGGTTACTGAAGACAGCAGACCATCACTGGCGTGTGACCTCTGTTGTCAAAGGCTCGAGCTAGGCACCTGCTATGAGCTCAGGAGGAGATCTCTCCGCAGTGAAAAGATGTTCACGCAGTTGCTGAGACACAAAGTGCAAGTTACACTACAAGTAATGCCCGATATGCACCTGAACATGGTGAAGAGGACTGCAGATGTCGTAGATAATGATGAAGTGAAACAAGAAGATGCTGAAGATGATGCCGCGGTAGAGCAAGATGACGCAGCCTTGTATCACACCGCACTAGGCTTACACACGGAGTGTGACGTACCTCTAAGTGTTGTGAAGGAGGAACCGGATGACGTCGACACTGGTGATGCCGCGGTAGATGGCGCAGACCTGTATCATACCGCACTAGGCTTACACACGGAGTGTGACATACCTCTGGATATTGTGAAGGAAGAACCGGATGACGTCGACCCTGATGATGCCGCGGTAGAGCAAGATGACGCAGCCCTGTATCACACCGCACTAGGCTTACACACGGAGTGTGACGTACCTCTAAGTGTTGTGAAGGAGGAACCGGATGACGTCGACACTGGTGGCCATCGACTGGCCGCGCAGAAGTACCGTGAAGATAAGATTTTAAACAGCCTTAGCAGAATTGACCAAACAATGGACAAGGTTGAAGAACCGAAACGAGGGACTAAAAGAGCTGCTGAAGACAAACCAGTTAAGAAAAATAAGATAGTGGAATCTCGCCACAAAATAGATATCGAATTACATAACAACAAAGGCTCATCAGGAGAAGGACAGCCGTATTATCTGATATTACAAATGTAA
Protein Sequence: MYETLTMMPLVTEDSRPSLACDLCCQRLELGTCYELRRRSLRSEKMFTQLLRHKVQVTLQVMPDMHLNMVKRTADVVDNDEVKQEDAEDDAAVEQDDAALYHTALGLHTECDVPLSVVKEEPDDVDTGDAAVDGADLYHTALGLHTECDIPLDIVKEEPDDVDPDDAAVEQDDAALYHTALGLHTECDVPLSVVKEEPDDVDTGGHRLAAQKYREDKILNSLSRIDQTMDKVEEPKRGTKRAAEDKPVKKNKIVESRHKIDIELHNNKGSSGEGQPYYLILQM

Sequence clustering based on sequence similarity using MMseqs2