Basic Information

Insect: Cybosia mesomella
Gene Symbol: -
Assembly: GCA_946251875.1
Location: CAMIUH010001692.1:603621-605867[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-09 7e-07 30.8 0.0 5 38 17 50 15 56 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-09	7e-07	30.8	0.0	5	38	17	50	15	56	0.92

Sequence Information

Coding Sequence: ATGGAGCATTCCGTCAGCAGAAAGCGGGGTCTATGGTCACTTCAACAATTAAAAGACGCTATGGAATCTGTCAAAAGCGGATTCATGTCTCAACGTGCAGCTGCTAAACATTACTCCATACCCAGAAGAACATTAGTGAACCATCTGCAATCAGGAAAAGTGGAGAAACAGATCGGACGTCGCACAGTTATGACGAAACAGCAGGAAGGCGATTTAGCTTCAAGGATTAAACGACTGGCATCCATTGGATTTCCTTTAACACCAAAAGTATTACGTCATCAGGCCTTTGTATTTTGTGAATCAAATAATATTCcgaattgttttaataaatcttcGAAGCGAGCTGGAAAAGATTggttgaaactatttttaaaaagaaataatgatATATCAATGCGTAAGGTTCAGATATTAAATCCCGGTAGAGCTCAAAAACTGAACAAACACATTGTGATGCAGCACTTTCAAGAGTACAAAAAAATTTACGAACAACTAGATATTGCGAATAATCCACAGCGTCTGTATAATATGGATGAAAAAGGCTGCAGGCTTACAATTCACCACCAACCTTTGGTTTTAGCTCAAAAGGGAACGAAAAGAGTGCACATGGTCGCACCTGAACACGGAGAAAATGTTACAATAGCAGCTTGCGTGAACGCATTGGGTAATGCCGTTCCCCCGATGATACTATTCAAGGGGAAAAGGATGAAGCCTGAATTCAACGACAACTTACCTTTTGGATCGTTGGTGAAAATGGCCCCAAAGGGTAGCATGACCACGTCGCTATTTGTAGATTTCATCCATCACCTTGGAAAATTTAAGTCAGAGGGTCAATGCTTGCTAGTTTTTGATGGCGCGTCATGTCATTTAGATTACAGCATTGTTGATGCCGCagacaatgaaaatattatattgtattgctTGCCATCAAATACTACCCACGAACTTCAACCTCTGGATAAAAGCGTGAACAAATCCTTTGAGCATCATTGGGACGAAGAGGCTTTATCATATACCTATCAATATCCTGACAAAAAAATTACGAAAGCtcgttttaattcaattttcaGTAGGGTTTGGTCGAAGTGTATGACACATGATATCATAATAAACGGCTTTAAATCTACTGGTCTTTATCCGTTCAATCCAGAAGCGATCCCACCTGAAGCTTATGCTCCTTCTGTTCTTACTGAAAGACAATACCATCAGGAAAATGTTATTTCCAAATGCAATTCGCCAATTCCAGGACCATCAGGGATTAGTCGTACAATTCCAAGACCTCAGCCTGATAGTTCTGATTCCGATAACACATTTTGTGACGATCAAAGCTCTCCATCCTTACTGCAAACAGATTTGCCTCAGCCCCACACAGGAATTATCAGGGATGAAAAAAGATTAGTGGACTACAGTGCAACGGATTCTGACTCCGAAAATGCAATACCCACAACCAGTAATCTTTACACTAATCCTGAAATAAGAAGACCAGTACTATATAGCTCTGATACAGATTCTTCTATAGTAGCCATGTCAACAAGGCCCCATGAACCCCGACTGAAATCTTATGACATATACTCGTCTAGTTCGACTGACGATGAAAACTCTACACGTAAACAAAATAGTACTCCTATTAAGCATGTGGAAGCCACGAGAAGCCTACAACCTGTCACCAGTGATGATGATTCTGCAGATAACGTACCATTAGGAAGATTGCCAGTGAGTAAAAAATCATTTCAAGAACTTATACCCACACCGAACTATGCCGTGGTCAAACAAACCCCCAGAAGAAAAGCAATAAATTATAAAGCTCAGATAGTTACTAaagatttatttaaagaaaGGCAAACACAGAAAGAGAAGGCTAAAAAAGGGAGGAAAACAAGTCAGACAAGAAATAAAGTAGAAAGAGATAACAGGAGCAGATTTGAAAACGAAAGACAAAGTAACACTGATACTACGAAAAAACAACGGAAAACGAATCTGAAGAAGAAGGAACATCAGCGACAAGAAGAGATCGACGATCGTTCTAAAGGATGTGGAAAAGGAAAGAAGGTAAAGGAATCTTCAAAGAAAAACAAAGAAAGTGAAAATAACATCAATGATAATACTGATAAATGGTACTGTTATGCATGTAATGAAGAACGTTTTGAGGATATGCGACAATGTCCACTGTGCCAAAAATGGTTTCATGAAGCATGTTTGGGGCTTACTAAAAAGGATTCGGATTTTGAATGTCCGATGTGTAATTAA
Protein Sequence: MEHSVSRKRGLWSLQQLKDAMESVKSGFMSQRAAAKHYSIPRRTLVNHLQSGKVEKQIGRRTVMTKQQEGDLASRIKRLASIGFPLTPKVLRHQAFVFCESNNIPNCFNKSSKRAGKDWLKLFLKRNNDISMRKVQILNPGRAQKLNKHIVMQHFQEYKKIYEQLDIANNPQRLYNMDEKGCRLTIHHQPLVLAQKGTKRVHMVAPEHGENVTIAACVNALGNAVPPMILFKGKRMKPEFNDNLPFGSLVKMAPKGSMTTSLFVDFIHHLGKFKSEGQCLLVFDGASCHLDYSIVDAADNENIILYCLPSNTTHELQPLDKSVNKSFEHHWDEEALSYTYQYPDKKITKARFNSIFSRVWSKCMTHDIIINGFKSTGLYPFNPEAIPPEAYAPSVLTERQYHQENVISKCNSPIPGPSGISRTIPRPQPDSSDSDNTFCDDQSSPSLLQTDLPQPHTGIIRDEKRLVDYSATDSDSENAIPTTSNLYTNPEIRRPVLYSSDTDSSIVAMSTRPHEPRLKSYDIYSSSSTDDENSTRKQNSTPIKHVEATRSLQPVTSDDDSADNVPLGRLPVSKKSFQELIPTPNYAVVKQTPRRKAINYKAQIVTKDLFKERQTQKEKAKKGRKTSQTRNKVERDNRSRFENERQSNTDTTKKQRKTNLKKKEHQRQEEIDDRSKGCGKGKKVKESSKKNKESENNINDNTDKWYCYACNEERFEDMRQCPLCQKWFHEACLGLTKKDSDFECPMCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00637507;
90% Identity: iTF_00637507;
80% Identity: iTF_00637508;