Basic Information

Insect: Cybosia mesomella
Gene Symbol: -
Assembly: GCA_946251875.1
Location: CAMIUH010000206.1:743125-745125[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-10 4.4e-08 34.6 0.0 1 39 15 52 15 56 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-10	4.4e-08	34.6	0.0	1	39	15	52	15	56	0.91

Sequence Information

Coding Sequence: atgCCGCGGAACAGACCTAGAACAACAAATAAAGCAAAATGGACTAAAGATGACTTAGAAAAAGCTGTACGAGCTGCGCGTGATGGAGTTTCTATACGGAAAGCTTCCAAGATATTCATGATACCCTTCAGTACTTTACAAGAAAGAATCAAGAAGAATCTTCCTATTACTGCGCCTTCTCTAGGAAGACATGCCACTTTCTCACCAGAAGAAGAGAAAGGTATGGCTGAGAATATAAAACTTTTGGCTAAATTATATTATGGCCTCAGTCCACTGCAAGTTCGCCGTGCAGCTTATGTTTATGCTGAGAAACACAATATAAAGCACACATTCAACAAAGAGAGACAAATGGCTGGGAAAGATTGGCTTTATGGTTTTTTAAAGCGAAATCCTTCGATAACTATCCGTCAGCCTGAGGCAACTAGTATTAATCGCGTGACAGCATTCAATAAAGAGGAGGTTTCCTTGTTCTTTAAAAATTTGGAAGACATTATGGAAACGTACCAGTTTGCTgcatcaaaaatatataacatggATGAGACCGGCATCAGCACCGTGCAAGACCCTGGTACAGTCATTGCTGAAAAGGGACAGAAGAGAGTAGGATCTGTTACAAGTTATGAAAGGGGAAAAAATATCACGGTCATTTGCGCAGTGTCTGCTTCTGGATCCTACATACCTCCAATGTTTATTTACCCACGCAAGAGGATGTCACCACAGTTGAGCAAAGATGGTCCAAATGAAGCTATTTACCACTGCTCGAAAAATGGCTGGACGAATCaagatttatttgtaatatgGCTCAAACACTTTGTGCACTTTGCGAGACCGTCTTCGGCTGAGCCAGTGCTTCTAGTTTTGGACAATCATTACAGCCACGTGTCTTTGGAAGCATACACATTCTGCCGAGAAAACTTCATTGTTGTACTATCCATCCCACCGCACACCTCTCACAGAATGCAACCGTTAGATGTTGCATTTTATGGCCCCTTGAAAGCTGCCTTTCGAAGGCAGTGTGATTTGTTTATGAAAAGCCACGCTTTGCTAAAAATAACTCCGTACGATGTGGCTTCTATATTCAACAAAGCCTACTGTGACACGGCTACAATTCAGAAAGGAGTTTCTGGATTTAAGGCGAGTGGAATTATGCCTATCGATCCTACCGTTTTTGGAGAAGAGGATTTCTTGGCCTCAGACTATCTATTGGGTTCCCAAAACGACACTGTTACTGTGATGAATGATTCCACAGCTAACCCTATGGACCATGATCAAGCAACATCTACCTTTCCACTTGAGGCCAATAATTTTCCAGAACCCAGCGCCCAAGTACAGATTGCTCCTGAGGCAAATAACTTGTCAGAAACGAGCAACCAATTACTGGATACTCCTGAGGACAATAATTTGCCAGAAACGAGCGCCCAAATACAGACCGTATTGTCTCCGTTGCCACTTTTGCCAACTCAAGCTAGAAAACGTGCAAATACCAAACAACACTCTGCTATCCTAACAGCAACACCCCTGAAAGCAGAATTAGAAAACAAGGAAAGGAAAAGACAAGAGAAGTTGTCAAAAGATAGCAAGAAGATTGACAAGAAAACTGAAAAGAAAGTTAACAAGAAAACTGACAAGAAAACTGATAACAAAAAGATAAACACCACTACCAAACGAAGACAACTTAAGACCAGTAAGAAATCAAGGATCGATCCAGAGTTTTgttcctcggatgaagaagtTTTGGCTTctaagaagaaaaagaaaaatctgAAATCTACCAGGTCAATCCCAGACTCGTCAGATGAAGAAAACCTTGAAAGTATAGACGATAGTGAGCAAGAAATATGTTGCATTTGCAAAGAATTTGGGAAAAATGAAATTTGGTTCAGATGTCGAGGTTGTGGAAAGTGGGCACACAAAGAATGCTCTGGAGCCGATTCTCCTGAGAAATATGAATGTGATTCATGTGTGCGTATAAATAAAGTTACAAAACGCCTTGATTTGTAG
Protein Sequence: MPRNRPRTTNKAKWTKDDLEKAVRAARDGVSIRKASKIFMIPFSTLQERIKKNLPITAPSLGRHATFSPEEEKGMAENIKLLAKLYYGLSPLQVRRAAYVYAEKHNIKHTFNKERQMAGKDWLYGFLKRNPSITIRQPEATSINRVTAFNKEEVSLFFKNLEDIMETYQFAASKIYNMDETGISTVQDPGTVIAEKGQKRVGSVTSYERGKNITVICAVSASGSYIPPMFIYPRKRMSPQLSKDGPNEAIYHCSKNGWTNQDLFVIWLKHFVHFARPSSAEPVLLVLDNHYSHVSLEAYTFCRENFIVVLSIPPHTSHRMQPLDVAFYGPLKAAFRRQCDLFMKSHALLKITPYDVASIFNKAYCDTATIQKGVSGFKASGIMPIDPTVFGEEDFLASDYLLGSQNDTVTVMNDSTANPMDHDQATSTFPLEANNFPEPSAQVQIAPEANNLSETSNQLLDTPEDNNLPETSAQIQTVLSPLPLLPTQARKRANTKQHSAILTATPLKAELENKERKRQEKLSKDSKKIDKKTEKKVNKKTDKKTDNKKINTTTKRRQLKTSKKSRIDPEFCSSDEEVLASKKKKKNLKSTRSIPDSSDEENLESIDDSEQEICCICKEFGKNEIWFRCRGCGKWAHKECSGADSPEKYECDSCVRINKVTKRLDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00895829;
90% Identity: iTF_01385632;
80% Identity: iTF_00404674;