Cmes013287.1
Basic Information
- Insect
- Cybosia mesomella
- Gene Symbol
- -
- Assembly
- GCA_946251875.1
- Location
- CAMIUH010000363.1:79814-80278[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-11 7.1e-09 37.2 0.0 2 37 16 51 15 58 0.93 2 2 7.4 2.1e+03 0.4 0.0 14 23 137 146 131 148 0.73
Sequence Information
- Coding Sequence
- ATGGCTAAGCCCTACACAAGAATGACATGCAGAGCATCGTGGACAGCTGAAGCTTTGGATGAGGCGATGTCAAAGGTTAGAAGCAAAGTATTGGGAATTAACCAAGCCAGCAGGGAGTATGGCATTCCTAGTCGGACCCTTAGAAGACACCTTACATCTGGCAAAGGTAAAGGCCCACTTGGTAGATATCCGGAACTAGGGACTGAGTATgaaaaaaaacttgttaaacATATTCAAGCTCTTGAAAAAGTTGGTTTTCCCCCTAAAAATATGACGTCCAGAGATTGGCTTACACTTTCGCAAACAAAAAGGAAATTAGACCACAGATTTTCAGAAGAGAGGCAAAAAGCTGGTGATGACTGGTTCTATGCCTTTATGCGCCGTAATAAAGAAATAGTATTGCGTAAGTCTGAGGGTTTATCTTTAGCCCGTGCACAAGGAGTGAACCGCAAAGATGTGGAGTAA
- Protein Sequence
- MAKPYTRMTCRASWTAEALDEAMSKVRSKVLGINQASREYGIPSRTLRRHLTSGKGKGPLGRYPELGTEYEKKLVKHIQALEKVGFPPKNMTSRDWLTLSQTKRKLDHRFSEERQKAGDDWFYAFMRRNKEIVLRKSEGLSLARAQGVNRKDVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -