Csei001664.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- grn
- Assembly
- GCA_905187585.1
- Location
- LR994556.1:13433005-13457977[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-20 2.3e-16 59.6 4.7 1 35 186 219 186 220 0.98
Sequence Information
- Coding Sequence
- ATGACGGGCACAGTCATGGTAGCAGGTCGGTCGCTGAGCGGCGGGAGCGGGCAGGTGTGCAGGCCCCACTTCCACACGCCGCTGCACCCCTGGCTGGATTCCAAGGCGCTGGGCAGCGGGGCGTGGGGCGGCAGCTTCCAGCAGGAGGGGGCCCCTGACAAGCCCCTGTCCCCGGCGCAGCACCCCCATCCGCACCCCCTCTTCTCCTTCCCCCCCACCCCTCCCAAAGACTCCACGCCCGACTCCGTGGCTGCAGCGGCACTAGGCCAGCAGGACTACCAGGCGGCGGTGGCGCACGCGACGGCCATGAGCGTCGCCTTCATGCAGCAGCAACAGGAGCTGCCCCTCTGCGGCGACGTCAAGCCGATGATGGGCGCGCAGAAGCAACGCGAAGGTGCGCAGCCGGACTCGTGTCCCCAGGAGAGTCAGCCCCCCGGGGAGTACAATGCGCAGTACAATGGCGACTACTACGGCTACCAGGGCAAGGGGTATAACGGGCAGCAGCAGAATAAGCCCCGGCCCAACAAGACGCGAACTAGCGCCGAGGGCCGAGAGTGCGTGAACTGCGGAGCCACGAGTACTCCGCTGTGGAGACGCGACGGCACCGGCCACTATCTGTGCAACGCCTGCGGACTCTACTACAAGATGAATGGTCAAAACCGTCCTCTAATCAAGCCAAAGCGAAGATTGGCACTGCGCATTGTCGTCGGAGTTTTTGTGTACTCTCTAGTCTACCTGGAGGCGCCAGCGTGA
- Protein Sequence
- MTGTVMVAGRSLSGGSGQVCRPHFHTPLHPWLDSKALGSGAWGGSFQQEGAPDKPLSPAQHPHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAQKQREGAQPDSCPQESQPPGEYNAQYNGDYYGYQGKGYNGQQQNKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLALRIVVGVFVYSLVYLEAPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00935357; iTF_01136403; iTF_00811636; iTF_00688277; iTF_01203708; iTF_01204531; iTF_01205364; iTF_00156864; iTF_00155911; iTF_01135419;
- 90% Identity
- iTF_00688277;
- 80% Identity
- -