Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994567.1:13920927-13927494[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.087 6.6 7.9 0.3 1 23 350 372 350 372 0.94

2 10 2.6 1.9e+02 3.2 3.3 3 23 382 402 382 403 0.76

3 10 0.0052 0.4 11.7 0.3 1 23 407 429 407 429 0.96

4 10 0.0021 0.16 12.9 4.4 1 23 434 457 434 457 0.98

5 10 0.0016 0.12 13.3 0.7 1 23 461 484 461 484 0.96

6 10 0.059 4.4 8.4 0.1 2 20 496 514 496 516 0.93

7 10 0.074 5.6 8.1 3.7 2 23 589 610 588 610 0.95

8 10 3.1e-07 2.3e-05 25.0 2.6 1 23 616 638 616 638 0.99

9 10 0.13 10 7.3 5.1 1 23 645 668 645 668 0.97

10 10 0.00025 0.019 15.9 0.2 1 23 674 697 674 697 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.087	6.6	7.9	0.3	1	23	350	372	350	372	0.94
2	10	2.6	1.9e+02	3.2	3.3	3	23	382	402	382	403	0.76
3	10	0.0052	0.4	11.7	0.3	1	23	407	429	407	429	0.96
4	10	0.0021	0.16	12.9	4.4	1	23	434	457	434	457	0.98
5	10	0.0016	0.12	13.3	0.7	1	23	461	484	461	484	0.96
6	10	0.059	4.4	8.4	0.1	2	20	496	514	496	516	0.93
7	10	0.074	5.6	8.1	3.7	2	23	589	610	588	610	0.95
8	10	3.1e-07	2.3e-05	25.0	2.6	1	23	616	638	616	638	0.99
9	10	0.13	10	7.3	5.1	1	23	645	668	645	668	0.97
10	10	0.00025	0.019	15.9	0.2	1	23	674	697	674	697	0.91

Sequence Information

Coding Sequence: ATGAGGTGTTGCATATTGTCCTGTGTGAATAACTCCACAGCACCACCAGATATTACTTTTTACCAACTACCAAAAGAGTACCATTTGAAACAGTTATGGGTAGAAGCTATTAGTACACCAGAGTGGGAGCTACCACCCAACAGTGCAGTATGCTCTGCACACTTTGGAGAATTTGATTTGACAATCTCAGAGACAGGAGAGAAGTTGCTTATAGATGGTGCGGTACCCAGCCTGTGTCTTACCTGCAGAGTGTGCCTGGCCATGGACAGGAAGATGTTCAACATCAGGGACCACAACCTTCATCACCTCTACAAGATGATTGTTGGAGTCACGGTGGAGGCTAGAGACTATCTGCCCCAGATGCTGTGCTGGGAGTGCACCAGTAAACTAATGTCGTTAAAGAAGTTCAAAGAGCAGGCACAAACATCACAATTACTGCTGTCAAATAAACTAGCTGTAAATAATATCCTCACTGTTGGTGATATAAAATCAATAGACCGTATACATAATAAATTAAAATCAAACCTTACAATCAAGCACAATAAGCCAAACGAGTTCGACTTTAATATAGATGTGTTTGATTTGGCCATGGATCACATGGAGATGCTATTGGATATTAAACCTGAATGTGACCAGGGACCCACTTTGGAGCTCAGTGGAATATCCCCCAAACATGAGATGCCTAAATGCGGAAAAGTTGAGCCGGATTCCTCTATTCTGGTTGAAATGTTAGATTTGAAACAGAACATAGATGTGAAGGATATAACCGACCATATCAGTGATGAACACGATAGTAATATGTCGCTACGTCCACAACATAGGGATAGCAAGATAGAAACTAAACCAGTTAGGAAACTAGTGAAAAAAGAAGCTACAGCAGCAAAGAGAAAGAGACCCACAAAAGAAGTAAATGTGAAAAGAAAGAGGAAAAATGCGAAAGGTCCGAGGATCGAGCTGCCCGGGTTCGAAGTGCGAAAGCTGACGCTGGAGGAGCAGCAGGCGGCGGTGGCGGCGCGGGCGCGCTCCGCGGCGTACCTCGACGCGCCCTACAAGTGCGAGGTCTGCTACAAGGGGTTCCTGTCTGAGAGGACCCTCGCCACGCACGCCGTGCGCCACACCGAGGTATGCCTCGGGGCCGACGGGTGCGCGGTGTGCAAGTACCGGTACCGGCTGGAGAGGCACGTGCGCACACACGTCGTTACGCATCACACCAACCAGTACACCTGCAAAGTGTGCGGTCTGGTCACGCAGAGCAGCTCTACAGCTAAGAATCACCAGGATTGGCATGATGGCAGCACCTACCAGTGCCCGCACTGCCCCACCACACTCACCAAGCACACATCATACATGTCGCACCTGCGGATCAAGCACTCGTCGCGGTTTTCGTGCGAGCTGTGCGGCTACACCTTCATCAGCGAGCGCGGCGTGCAGACACATAAGAACAAGAGCCACGTCCTGGACGCTCAGGAGGTGCTGGCCGGTCCGTACTGCGAGGAGTGCAAGCTGCGGTTCGCCAGTGACGAGGCCTATCAGCGCCATCTCACGCAGTCCTCCGTACACAGCAGCGATGACGACCCGAATCGCGTCCGGAATGAAATATATACATATAAGCTGCACCCGCGGAAGACGGTCAAGCGGCGTGCGGCCGGCAAACCGATACCTTGCGAGGAGTGCGGTGAGCAGCAAGACAACTACAGAGCGTACGGGAAACACTTCCGCGCAGCGCACCCCGGCCTCAACCGCACCAAGTTCAGCGGCGACTGCATGTGCGAGCAGTGCGGCAGGAGGTTTCAGTGCAAGGCTCTCTTGCTGGACCATATGCTGTCACACTCCGGCGAGAAGCGGTTCAAATGCCAGACGTGCGACAAGGCATTCACCCACAAAAACAATCTAGCTGTGCACCAACGCGTACATGGCGCGAAGGTTCCTATCTACTGCTGTCCCTACTGTGACCGACAGTTCCACTTCTATCCGAACCGCGACCGCCACGTGAAGACCGTGCACAAGGGCGTGAAGCAGTTCCAGTGCGAGATCTGCGGCAAGGAGTTCACGTCGGCGGCCGGCCAGCGCGCGCACGTCGACCACGTGCACCACAAGAAGCCCCGCCCCAAACGCGTGCGCGCACGTGCTCCGACCGCCCCGCCCACCGCTTACCGCGACTAA
Protein Sequence: MRCCILSCVNNSTAPPDITFYQLPKEYHLKQLWVEAISTPEWELPPNSAVCSAHFGEFDLTISETGEKLLIDGAVPSLCLTCRVCLAMDRKMFNIRDHNLHHLYKMIVGVTVEARDYLPQMLCWECTSKLMSLKKFKEQAQTSQLLLSNKLAVNNILTVGDIKSIDRIHNKLKSNLTIKHNKPNEFDFNIDVFDLAMDHMEMLLDIKPECDQGPTLELSGISPKHEMPKCGKVEPDSSILVEMLDLKQNIDVKDITDHISDEHDSNMSLRPQHRDSKIETKPVRKLVKKEATAAKRKRPTKEVNVKRKRKNAKGPRIELPGFEVRKLTLEEQQAAVAARARSAAYLDAPYKCEVCYKGFLSERTLATHAVRHTEVCLGADGCAVCKYRYRLERHVRTHVVTHHTNQYTCKVCGLVTQSSSTAKNHQDWHDGSTYQCPHCPTTLTKHTSYMSHLRIKHSSRFSCELCGYTFISERGVQTHKNKSHVLDAQEVLAGPYCEECKLRFASDEAYQRHLTQSSVHSSDDDPNRVRNEIYTYKLHPRKTVKRRAAGKPIPCEECGEQQDNYRAYGKHFRAAHPGLNRTKFSGDCMCEQCGRRFQCKALLLDHMLSHSGEKRFKCQTCDKAFTHKNNLAVHQRVHGAKVPIYCCPYCDRQFHFYPNRDRHVKTVHKGVKQFQCEICGKEFTSAAGQRAHVDHVHHKKPRPKRVRARAPTAPPTAYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00164712;
90% Identity: iTF_00164712;
80% Identity: iTF_00403894;