Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994567.1:13788513-13796115[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.15 11 7.1 0.6 1 23 212 234 212 234 0.98

2 10 0.31 24 6.1 0.1 1 20 241 260 241 264 0.90

3 10 0.00056 0.043 14.7 0.4 1 23 295 318 295 318 0.98

4 10 0.0027 0.21 12.6 0.5 1 23 322 345 322 345 0.92

5 10 0.0099 0.75 10.8 0.1 1 22 391 412 391 416 0.92

6 10 0.00021 0.016 16.1 0.1 2 23 463 485 462 485 0.96

7 10 0.00058 0.044 14.7 4.0 1 23 494 516 494 516 0.98

8 10 0.02 1.5 9.8 0.0 6 23 526 543 525 543 0.99

9 10 6.2e-08 4.7e-06 27.2 1.7 1 23 549 571 549 571 0.99

10 10 0.0072 0.55 11.3 3.6 1 23 577 600 577 601 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.15	11	7.1	0.6	1	23	212	234	212	234	0.98
2	10	0.31	24	6.1	0.1	1	20	241	260	241	264	0.90
3	10	0.00056	0.043	14.7	0.4	1	23	295	318	295	318	0.98
4	10	0.0027	0.21	12.6	0.5	1	23	322	345	322	345	0.92
5	10	0.0099	0.75	10.8	0.1	1	22	391	412	391	416	0.92
6	10	0.00021	0.016	16.1	0.1	2	23	463	485	462	485	0.96
7	10	0.00058	0.044	14.7	4.0	1	23	494	516	494	516	0.98
8	10	0.02	1.5	9.8	0.0	6	23	526	543	525	543	0.99
9	10	6.2e-08	4.7e-06	27.2	1.7	1	23	549	571	549	571	0.99
10	10	0.0072	0.55	11.3	3.6	1	23	577	600	577	601	0.94

Sequence Information

Coding Sequence: ATGAACGAAGGAAGCTGTTCTTTATGCTTTACAATGGAAAGGAGAACAATAAATATTACAAAAACACACTTGCAGCAAGTTTACGAAAAAATAGCTGGTAATGATATTCAAGATGCCATGTTCTTATGTTTCATCTGTCGCACTCGACTGCAGCAGTGCTACCAGTTCTGGCTACTTGTACATAGGGCGGAAAGTGTTTTTAAAAACTTTGGAAGCAATCACAAGTTGTTTCAAGCGGTCAATGTGTTGAAGCCACAAAAGCCACTATTGGAACTACGCACTACTGATGTGGTCAATATTTCAATATTGTTCAACGAAGAGCCAGTTAAACTCGAGGATGACATCAAAACAGAGGACCAGTGTGATAAAGAAACAACTAAATCGGAAGTTGATGACTTTGATAGAACAGATGATTTCAATAGAAGCTCGGATTCAGAAGATGATTTGCCTCTCAAAGACATTAAAGTTAAGCAGGAGATGGATCAGGGAGAGGGAAAGAAGACTGAAGTGGAGATCAAGATAATGGAAAAGGAGGCTATAGAACTCCACGCGAAGGAGATAACGCTCAGCTTGGAGGAGCAGCTACAGGAGCTGCGCGCGCGCGCCGCCAGCGACAACTACGTGCAGTCGGCGTACCGCTGCGAGCTGTGCTGCCGCGGCTACGCCGACCCCGTCGCGTACGAGAATCATAGGGAGAAACATGACAAGCGCGCGGGCGAGCACGAGTGCGGCGTGTGCCGGCTGCGGTACGTGAGCGGGCGGCAGCTGCGCGCGCACGCCGTCGCCGCGCACGAGCGCCGCTACCTGTGCGCGCGCTGCCCGCACCGCTCCCACACCAGGCACCAGGCGGTGGAGCACGAGCTCTGGCACCGCGGCCACACGTACCGCTGCGACCCCTGCGGCCTCGCCTTCGCCAAGCCGACAACGTACATGACGCACATGCGCAAGCGTCACGCGGGCGGGCACGCGTGCGCGCGCTGCGGGGAGAGCTTCGCCAGCGCGCACGGCCTGCGCCTGCACGCCGCCAAGACGCACGGGAGAGAAATGGTGGGTATATATTATTTACCCAGTAGCGCCAGGAGTTATCGTGTGTTGCAGCCGGAAACAAGGCCGGGTGTGGAGGCGGGGGGCGGGGTTATCGAGGTGGACGGCGAAGTGGGCGGGGCTGAGCATCAGTGTGCGGAGTGCGGGCTGCGGTTTATAAGTGAGGCCGCGCGCCGCCGACACGTGCTCACCGCGCCCGCGCACCGCCTGTGGACCGACAAGGGTTTATGTGCGCTGTGCGGCGTAGCGGTGCGCGGCGTTGACCGCAGGACGCACGCGCGCCGCCACCGCGCCGAGCTCGCGTCGCGTTCGCGGGCCCCGCCCAAACCCAAACCCAATTTACGCTGTGAACAGTGCGACGCGACGCTGTCGTCGGTGTCGAACCTGAACGCGCACGTGCGGCGCGTGCACCTCGGCGAGCCCATCGCCCGCCCCCACGTGTGCGAGCTGTGCGGCGTGCGCTGCACCTCGCGCGCGACGCTCCGCTACCACCAGCGTCGGCACACGGGCGAAAAGCCGCACGTGTGCGCGTGCGGCGCGCGGTTCGCGCTGTCGTCGGCGCTGCGGGTGCACGCGCGCACGCACTCCGGCGAGCGGCCCTACCGCTGCTCCGTCTGCGGGAAGCGTTTCTCGCAGAAACCCTCGCTTAATAAACACTACAGGGTGCACACGGGTGCCAAACCGTTCGAGTGTCAGTTCTGCGGGCGCGCCTTCAGCCAGACCAACTCTCTCAAGTGTCACGTCCGCGCAGTCCACCACAAAATACCCCCCAACAACAAGAAGAAAACAGACAAAAATAAAAAACATACTGAACCTGTAAACCAATAA
Protein Sequence: MNEGSCSLCFTMERRTINITKTHLQQVYEKIAGNDIQDAMFLCFICRTRLQQCYQFWLLVHRAESVFKNFGSNHKLFQAVNVLKPQKPLLELRTTDVVNISILFNEEPVKLEDDIKTEDQCDKETTKSEVDDFDRTDDFNRSSDSEDDLPLKDIKVKQEMDQGEGKKTEVEIKIMEKEAIELHAKEITLSLEEQLQELRARAASDNYVQSAYRCELCCRGYADPVAYENHREKHDKRAGEHECGVCRLRYVSGRQLRAHAVAAHERRYLCARCPHRSHTRHQAVEHELWHRGHTYRCDPCGLAFAKPTTYMTHMRKRHAGGHACARCGESFASAHGLRLHAAKTHGREMVGIYYLPSSARSYRVLQPETRPGVEAGGGVIEVDGEVGGAEHQCAECGLRFISEAARRRHVLTAPAHRLWTDKGLCALCGVAVRGVDRRTHARRHRAELASRSRAPPKPKPNLRCEQCDATLSSVSNLNAHVRRVHLGEPIARPHVCELCGVRCTSRATLRYHQRRHTGEKPHVCACGARFALSSALRVHARTHSGERPYRCSVCGKRFSQKPSLNKHYRVHTGAKPFECQFCGRAFSQTNSLKCHVRAVHHKIPPNNKKKTDKNKKHTEPVNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00164698;
90% Identity: iTF_00164698;
80% Identity: -