Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994559.1:2894829-2904873[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 5.7 4.3e+02 2.1 0.3 1 23 88 111 88 111 0.89

2 19 4.6 3.5e+02 2.4 0.1 3 23 116 136 114 136 0.94

3 19 0.31 23 6.1 0.0 3 23 141 162 139 162 0.90

4 19 0.51 39 5.4 0.3 3 23 387 408 385 408 0.95

5 19 0.004 0.3 12.1 0.1 1 20 416 435 416 437 0.95

6 19 0.04 3.1 8.9 0.7 2 23 447 468 446 468 0.93

7 19 0.94 71 4.6 0.6 1 23 484 507 484 511 0.86

8 19 0.14 10 7.2 1.5 1 21 516 536 516 539 0.83

9 19 8.1 6.1e+02 1.7 0.9 8 23 589 605 586 605 0.89

10 19 0.8 61 4.8 0.2 2 19 617 634 616 639 0.79

11 19 3.3e-05 0.0025 18.6 1.2 1 23 673 695 673 695 0.97

12 19 1.4e-06 0.0001 23.0 0.9 1 23 702 724 702 724 0.99

13 19 8.5e-05 0.0064 17.3 2.3 1 23 729 751 729 751 0.96

14 19 0.00041 0.031 15.2 1.5 1 23 757 779 757 779 0.98

15 19 3.9e-05 0.0029 18.4 1.2 1 23 785 807 785 807 0.93

16 19 0.00044 0.033 15.1 3.3 2 23 814 835 814 835 0.97

17 19 0.00036 0.027 15.4 0.8 2 23 843 865 842 865 0.97

18 19 0.00027 0.02 15.8 3.6 1 23 870 892 870 892 0.99

19 19 0.0028 0.21 12.6 3.1 1 23 898 921 898 921 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	5.7	4.3e+02	2.1	0.3	1	23	88	111	88	111	0.89
2	19	4.6	3.5e+02	2.4	0.1	3	23	116	136	114	136	0.94
3	19	0.31	23	6.1	0.0	3	23	141	162	139	162	0.90
4	19	0.51	39	5.4	0.3	3	23	387	408	385	408	0.95
5	19	0.004	0.3	12.1	0.1	1	20	416	435	416	437	0.95
6	19	0.04	3.1	8.9	0.7	2	23	447	468	446	468	0.93
7	19	0.94	71	4.6	0.6	1	23	484	507	484	511	0.86
8	19	0.14	10	7.2	1.5	1	21	516	536	516	539	0.83
9	19	8.1	6.1e+02	1.7	0.9	8	23	589	605	586	605	0.89
10	19	0.8	61	4.8	0.2	2	19	617	634	616	639	0.79
11	19	3.3e-05	0.0025	18.6	1.2	1	23	673	695	673	695	0.97
12	19	1.4e-06	0.0001	23.0	0.9	1	23	702	724	702	724	0.99
13	19	8.5e-05	0.0064	17.3	2.3	1	23	729	751	729	751	0.96
14	19	0.00041	0.031	15.2	1.5	1	23	757	779	757	779	0.98
15	19	3.9e-05	0.0029	18.4	1.2	1	23	785	807	785	807	0.93
16	19	0.00044	0.033	15.1	3.3	2	23	814	835	814	835	0.97
17	19	0.00036	0.027	15.4	0.8	2	23	843	865	842	865	0.97
18	19	0.00027	0.02	15.8	3.6	1	23	870	892	870	892	0.99
19	19	0.0028	0.21	12.6	3.1	1	23	898	921	898	921	0.98

Sequence Information

Coding Sequence: ATGTCATCCGCAGAATCGGACGATGAACCGCTCTCGGTTTTGGCCGCAGCTAAAAAAGCAAACCCTTACCCAGAGGAAGAAAATATAGATCAAGATACACATTCCATACATTCAAAGAAAAGAAAAAAGACAGTAGTTGCAAAAAAGTCGAGCATTTCTCTGAAAATCAATAAAAAACTACAAGAAATACTGTCGCCTCCCGTCACCCAACGACCAGCTGATGTGTGGTTGTACTTGAAAGATCTGAATGCAACGGGACCGTACACATGCTTGTTATGCTCAGCGTGGTTTATAAACAAATCAAAAATGATCATGCACTATGTTTTGAATCACAAGAAGGACTTCTGTGGTATATGCAGATACTTTGTACCAGACAGAGAGGCTTGGTTTGCACATGAAAAGTTTCACACTCCCTGGCCATGCTCACAATGCATTGACTCCTTTGCTACTGAACCCCTTTTGAGGGTCCACCTCCGTACAGCCCACAATTTAGTTCATTGCCGACTATGTCACTTCCGAGTTCCAGCAGACGAAGAATATGAATCACATCTGTACCAAAAACACAATGTCACTAATCCAGTTGTCAAAGAAGTGGAAAGCTTATGGGAAATCGACTATGATATACAGAAATATGTTTGTCTTTTATGTTCAAAAGGAGATAACCTATTCTCTACATTCTTTTCCCATTTCATGGGCTACCATCATTTTACCTTGAAATGTTTGACTGGTATTGTGGCCGGCAAGGACCCACCATTTTTAGTTGATGGTGCGGATGTCAGTGAACAGTTTATTGAGGATCAATTGAAAGGTCTGACACGTCTTGGCTATGTTGATTTGGAGCAGCAGAAAATGCCTATTTCAAAAGCGAATACTGAGTATCAGGATTCTCAAGTTCCTGACAATCTTCAGCCTGAGGTAAAACTAGAAGCTTATTGTGATGAGGAGGAAATAAAAACTGAAAATGCTGATACCACAGGAGATTCAGATCTGAATATTGACTATGAGGGCGTACAAGATTTTGATGTAACTCTAACAGAAGTGATAGTTTTAGAAAACAGTTACTTTGACTATTTAGAAAGTACACAAAGGGCTCTCAATTTAAACATGGTGCCGGAAAACTCAGATATCATGTACAAACATATGAAACCAGAATTATTCTGCTCTCTATGTGACTCAAAATTTCAAACTGAACCAGCATTTTTGGTACACATTTCCAAAATGCATAATGTAAGAGTAGTGCCTTTGTATTCATGCCGAGTTTGTGCAACCACATTTGACACACAGACTGAACTAAACTCACATATTACAGAGGAAATGGCTGACTTTGAGGATCTATGGATATGTCAGTTCTGTGACAAAGAATTTGATAATAGAGAGTCTTCTAGAAGACATTTGACAGAACACTGGCGCAGCTTGGAGTTTGACAACTGTTTCAGTCCGCACCTGGGATTCAAATGTAAATACTGTCCCACATTATTTTGGAATGAACCGGAACGAGAAGCACATCAAATAAGGGCACATATCAACAAACATAAGGATGACTTTTATAAATGCCAGAAATGTTCTTTAATGTTTAGTGATAAGGTATGGTTTATCTTTCATTATTTAGAGAAACATAAAAGTGATGAAACGAAACATTCCTATCTATTCAAATGTTGTGTCTGCTGCATAGTTCTGCCTAGTCTACAGGATACAAGATCACACTTTAAGGAACATCATCCGGAAGCTAAGAAAACTTATTGCTCTCTAGATCCATGTAAATTCAAACCTCTGACACACAGGAAATCATTAAAAGTACATGTAAAGAGTATCCATGGCTCCCCCAAAAGTCCGAAGCGTGAGTGCGTATCGTGTGCTGAGTGCGGGCGCGGGTTCGCCACGGCGCGTGCGTGCAGCGCCCACGCGACGCAAGTTCATGGCCAGGGGAAATTCAAATGCAAACTGTGCAGAGATGTGCTGCATACTTTGGATGAGAGAAAACTCCACTACCTCCTTCGACATCCCGGCCGCCATCCGTTCGAGTGCGGTGACTGTGGCAAGTCGTTCCAATACAAGTCCTCGCTGTACATGCACAAACAGGAACACGCGCCAAACAGACAGGACTATAAGTGTGAATACTGCGGAAAGATTTTTGCGAAGAAGGACTCGTTCCGCGAGCACCTCCAAATCCACTCCGGTCCGCGGCACGCGTGCTCCTACTGCCCCATGCGGTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGCGGCCGTACGCGTGCCCGCACTGCCCGCGCACATTCGCCGATAAGGGCGCCTGTACCGCGCACTCTAGAACCCATTCGAAAGCTACATCGTTCGCATGTATTTACTGCGGCCAGACGTTTGTTCAGAAGTCCAAGCTTACTTACCATATTCGGAAACATACTGGAGAGAATCTGGAGTCATGCACAGTATGTTCCAAACTATTTACCAGTGCTTGTTCTCTACGCGAGCACATGAAGACACATGTTGAGAACAAACAGATTGTCAAATGTCCACTTTGTGACAAGAAATACCAAGACGAGCGTTACATGCTTCGACATCTACGTACTTCGCACACCGGGTCAACGTACACTTGTCCCGTCTGTCGGAAATGCCTCACCAGTTCCACGGGCCTACGTCACCATGTCCTCACTCATAGCCGCCTCAACACTTTCCGATGTAAGATGTGCACCAAATCATATGCAGCTAAGAAGACGATGATAAAGCATCTCAAAAAGCGACACAACTTGGATGTTTCATTAATAAACACCAAAGAATATTTCTTCCGCTTGGACCCACGGGACTGCAAATTGGGCCTAGATGAGGAGACAATGAACATGATATTCGGACCCAAAAAGTTTGTTAGTGATGTTCTGATCACTGATTATGTGACCTTAGCTAACAATGTTAATGTGAATAAAGATAAGAGAGAAAGCAGCGATGAACAAGCTAAAGAGAGTGATAAAAGTGATAGCGGTATGGAGTTTGACACTGTTAATATTAAACAAGAGGTGCATAGTGAGGAGAATTCATTAGAACCAACAGACTTTGTGAGTGTTAAAATTGAAAGTGTAGATGAGAGTTACAATGAAGAAACCACATAG
Protein Sequence: MSSAESDDEPLSVLAAAKKANPYPEEENIDQDTHSIHSKKRKKTVVAKKSSISLKINKKLQEILSPPVTQRPADVWLYLKDLNATGPYTCLLCSAWFINKSKMIMHYVLNHKKDFCGICRYFVPDREAWFAHEKFHTPWPCSQCIDSFATEPLLRVHLRTAHNLVHCRLCHFRVPADEEYESHLYQKHNVTNPVVKEVESLWEIDYDIQKYVCLLCSKGDNLFSTFFSHFMGYHHFTLKCLTGIVAGKDPPFLVDGADVSEQFIEDQLKGLTRLGYVDLEQQKMPISKANTEYQDSQVPDNLQPEVKLEAYCDEEEIKTENADTTGDSDLNIDYEGVQDFDVTLTEVIVLENSYFDYLESTQRALNLNMVPENSDIMYKHMKPELFCSLCDSKFQTEPAFLVHISKMHNVRVVPLYSCRVCATTFDTQTELNSHITEEMADFEDLWICQFCDKEFDNRESSRRHLTEHWRSLEFDNCFSPHLGFKCKYCPTLFWNEPEREAHQIRAHINKHKDDFYKCQKCSLMFSDKVWFIFHYLEKHKSDETKHSYLFKCCVCCIVLPSLQDTRSHFKEHHPEAKKTYCSLDPCKFKPLTHRKSLKVHVKSIHGSPKSPKRECVSCAECGRGFATARACSAHATQVHGQGKFKCKLCRDVLHTLDERKLHYLLRHPGRHPFECGDCGKSFQYKSSLYMHKQEHAPNRQDYKCEYCGKIFAKKDSFREHLQIHSGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRTFADKGACTAHSRTHSKATSFACIYCGQTFVQKSKLTYHIRKHTGENLESCTVCSKLFTSACSLREHMKTHVENKQIVKCPLCDKKYQDERYMLRHLRTSHTGSTYTCPVCRKCLTSSTGLRHHVLTHSRLNTFRCKMCTKSYAAKKTMIKHLKKRHNLDVSLINTKEYFFRLDPRDCKLGLDEETMNMIFGPKKFVSDVLITDYVTLANNVNVNKDKRESSDEQAKESDKSDSGMEFDTVNIKQEVHSEENSLEPTDFVSVKIESVDESYNEETT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289138;
90% Identity: iTF_01217752;
80% Identity: -