Csei012108.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- zfy1
- Assembly
- GCA_905187585.1
- Location
- LR994567.1:11589900-11603893[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.11 8.3 7.5 0.8 1 23 167 190 167 190 0.95 2 12 0.047 3.5 8.7 0.7 3 23 199 219 197 219 0.96 3 12 0.0077 0.58 11.2 1.5 1 23 253 275 253 275 0.97 4 12 4.4e-05 0.0034 18.2 0.1 2 23 281 303 280 303 0.97 5 12 0.011 0.81 10.7 0.2 1 23 310 332 310 332 0.93 6 12 0.0056 0.42 11.6 1.6 6 23 341 358 337 358 0.92 7 12 0.00016 0.012 16.4 0.9 1 23 377 399 377 399 0.97 8 12 0.074 5.6 8.1 1.3 3 21 423 441 422 446 0.92 9 12 4.1e-05 0.0031 18.3 2.3 1 23 454 477 454 477 0.94 10 12 7.9e-05 0.006 17.4 0.2 1 23 482 505 482 505 0.97 11 12 3.2e-06 0.00024 21.8 3.4 3 23 514 534 513 534 0.98 12 12 7e-05 0.0053 17.6 1.9 1 21 540 560 540 561 0.96
Sequence Information
- Coding Sequence
- ATGGAAAAGTTGGAACAATTACACCTACCCGTTTACTATGAATCAGATGGTATTGATGTCAAAACACAGCACATCATTTGTATGTGCTGCCTTGCCAAAAATACGAAATTTTATAAATTAACAAATTGTGAACATGCGACGACTTTCCTTACCAATTTAGTGCCAGAGGTAACAAACTTTATATTTTCTAACATAGAAACAAACTCGACCATTGATTCTGAACCTGTAAAATATGAATCAACTCCATTTCCCATACCAAACGAAAATAAAACAGAATCTCCAAGTCAAGACTTCTCTTTTGTCAAATTGGAGATAAAAATTGAGTATGATGCCGAGAAGGAACCCGTTGCACCAAAAAAGAACAAGACTTCAAAGAAACCCAAGAACACTTTAGAAAACAAATATGAAGGGAAAATTAGAGTAGTTACTTTAACTGTCGATGAAATGATGGAGGAGAGAAGGTGTGATGCTTTGAAGCCGGGATTTTTGAAGCTGCCTTTCAAATGTGAGAAATGTATCACTGGTTTTGACCATGAGCCGCTACTTAAAGATCATATCGAGCAACGACATACCATGAAAAAAGGTGGGATCATATGTGATACTTGCAAGTCTGTCCTGAGCTCCAAGTCATCGTTATATGAACACAACAAGAGGCATTTCAGGAGGTTCGAGTGTGTGGACTTTTACAAGAGGTACAACGACATCCAATCGGTCCTGAAACATTATAACGAGCTGCACGGCAAGATCGGCATACACTTCGCGTGCAAGCTGTGTGACTATACCACAGAATCAAATCGCAGCTACCGCTACCATATCGACAAGCACCGGTCGGCGAAGGTGCAGTGCGCGGACTGCGGCAGCACCTTCGTCAACAAGAGAGGCCTGCGCGTGCACATACTCACGATCCACGGCTCGTCGCAGCGCGTGTACACGTGCGCACAGTGCGGGCGCAGCTACAACTGCAAGTCGGGTCTGGCGGCGCACGCGGCCGCGCACACCGGCGCCGCCTACTGCGCCCCCTGCGACGTCCATTTCCGGTCCAAGCTGGGACTGCGGAAACATCTGAGGACGCACTCCGCCCACGTCCGCGCTGTAGATAAGAACGCAGTGCACGAGGCGCAAAACGTATTTCCGTGCGGCGCCTGCGACAAAGTGTTCCGGTGGAAGACCAGCCTCAAGAGACATCTCAAGAAACATAATGACAAGAGTGAAGGCGGTACTGTGGGGGGCGGGGCGAGTGCGGGGGGCGGGGCGGGCGCGGCGTACTGCGACGCGTGTGAGCTGACGTTCGCGTCCGTGTGCTCGCTGCAGCGACACCTGCGGAACAGCCTCAAACACGTCACTAAGGACCAGCTCAAGTTCATCTGCGAGCACTGCAGCAAGCGTTTCGCGGACAAGACGAAGCTGCGGAACCACATCGAGGAGAAACATCTGCACTGGACATACACCTGCAGCCTCTGCGGCAAGCCTTCGAAGAACCGCGTGGGTCTGGAGCAGCACGTCCGCAACGTGCACAAGGGCCGCCCCAACAACAAGATCTGCCACCACTGCGGGAAGGGCTTCCCTACGAAGATGAAGCTGGAATCTCACATCCGCACGCACACCGGCGAGCGGCCCTACATCTGCGAGTTCTGCCCCAACACCTTCTCCCAGCAGTCTAATCTCTACAAGCACCACCGCCAGGTACAGTCCGCCCGCGGAGCACGAAGAAATTAG
- Protein Sequence
- MEKLEQLHLPVYYESDGIDVKTQHIICMCCLAKNTKFYKLTNCEHATTFLTNLVPEVTNFIFSNIETNSTIDSEPVKYESTPFPIPNENKTESPSQDFSFVKLEIKIEYDAEKEPVAPKKNKTSKKPKNTLENKYEGKIRVVTLTVDEMMEERRCDALKPGFLKLPFKCEKCITGFDHEPLLKDHIEQRHTMKKGGIICDTCKSVLSSKSSLYEHNKRHFRRFECVDFYKRYNDIQSVLKHYNELHGKIGIHFACKLCDYTTESNRSYRYHIDKHRSAKVQCADCGSTFVNKRGLRVHILTIHGSSQRVYTCAQCGRSYNCKSGLAAHAAAHTGAAYCAPCDVHFRSKLGLRKHLRTHSAHVRAVDKNAVHEAQNVFPCGACDKVFRWKTSLKRHLKKHNDKSEGGTVGGGASAGGGAGAAYCDACELTFASVCSLQRHLRNSLKHVTKDQLKFICEHCSKRFADKTKLRNHIEEKHLHWTYTCSLCGKPSKNRVGLEQHVRNVHKGRPNNKICHHCGKGFPTKMKLESHIRTHTGERPYICEFCPNTFSQQSNLYKHHRQVQSARGARRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -