Basic Information

Gene Symbol
Znf296
Assembly
GCA_905187585.1
Location
LR994547.1:7738554-7751230[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00028 0.3 11.6 0.6 13 44 179 207 174 207 0.90
2 12 3.3 3.5e+03 -1.4 0.3 18 29 239 250 237 257 0.81
3 12 0.92 1e+03 0.3 3.7 6 39 256 291 251 294 0.77
4 12 9.6 1e+04 -2.9 0.6 14 25 329 340 323 342 0.78
5 12 0.046 50 4.5 0.2 10 34 355 374 350 382 0.76
6 12 0.28 3e+02 2.0 1.2 11 27 383 399 377 412 0.79
7 12 0.015 16 6.1 0.3 8 29 420 441 419 453 0.83
8 12 0.00015 0.16 12.5 3.1 13 43 453 480 444 481 0.86
9 12 0.00017 0.18 12.3 0.9 19 41 492 511 485 513 0.92
10 12 0.36 3.8e+02 1.6 0.4 17 29 518 530 512 540 0.77
11 12 0.00032 0.35 11.4 1.7 5 40 534 566 530 569 0.85
12 12 0.032 35 5.0 0.1 18 40 575 594 573 597 0.73

Sequence Information

Coding Sequence
ATGGCTCTCACAAGTATAGATATAAAAATTGAAAATATATGCAGAACATGTTTAACAAAAGAAGCAGAACTACTCTCTGTGTTTAATACGTTCGTGGGAGCGTCAACTTTGAAGAACATCATAACATCTGTAACAGGGATAGAGTTCACAGAAGGCGATGGCTTGCCTACAACAGTTTGTAGTGAGTGCAAAGCAAAAGCTGAGACAGCTTATGACTTCAAGTCAAGGTCACGGGAATCTGACATGGCATTACAGGGTCTTATCAAGAAGGAGAAGTTGAATGACAATCATGATTTTGAGTCCGGTGTGAATGTGAAAATTGAAAATATAGCAGAAAATGAAGAGATGTACATGGATTTAGATTTTAATATCTCTCTCAGCAATAGCAATGATAATTTCGATGATGAGGAAATAAAGAGCTTAGATGAACCACACACAAGTTTACAACTAGATCATAAAGAATTACTAGAAAGTAGTGCTGCTAGTACAAGGTCAAAGAAGAAAATCGATACAGGCCAGAATATGTATGATACAGAACATAAAGTGGCGTACTGTCCCATGTGTGACACCTCGTATGCCGACGTGGAGACACTAACCAAGCACATGTGGCACAAACACAGCGATATTATGGGGCCAAAGAAGAGGGGACGACCAAAGAAAATTCAAACTAGCGCAATTTTAAAGAAACTTTCGGAAAATGTTATGTCATTATCAACATGTGAATTCTGTAAGATGGATTATAAAACCAAAGAGAAGCTAGACTCACATATGCATATACATAAAGATACTTTACTTACAAACTGCCTAGTCTGTAAAAAAGTTTATCTATCCAAAGCGTACTATCAACAACATAAATGTCAGAGGAATCATATCGATAAATTGCAAAATGCAGAACCCCCGGATCCAAATATTATACAGGACAGATCAGCACAAGTTTTGTTGGCTGAAATTGTTAAATTTAGTGATGCACAGCAGGAGGCCATAGAGCGTGTAAAGGTGTGCGAGGCGTGCGGGCGCGTGTGCCGCTCGCCGGCCGAGCTGCAGCAGCACCGCGACGCCGACCACCCCGAACTGTCCGCCAGCTGCCAGCTGTGCGACAAGACATTCGCATCAGTGAAGACGGCAGAGCGTCACCGAGTGACGTGTGAGCGAGTCGAACGTAAATTCGTCTGTAACACGTGCGGACGACGATTCGCTTTCGAGATCTCTCTTAATAAGCACATATTGCAAAGTCACGCCGGTCAAAGAGTGTCAGTGGACTTCATAAGCCGCCAGAAGCGACAGGTCAGCTGTGACTTGTGTGGCAAGACCTTCCCTAGTAAGGAGCAGCTTGTTCGTCACAGCATCGTACACAAAACACCGAAGAAATACGAATGTGACAAGTGCAAGAAGAAGTTCACTAGGAAAGGGAATTTAAAATCTCATATACTCCGAGTACACGAGTCAGGTCGCAGCAGCAAAGCCAGCGGGCTATGTCTGTACTGCGGCCGCAGTTTCAACAACTCATCCAATCTCATAGTACACATGCGACGGCATACTGGCGAGAAACCCTATCAGTGTGATTTCTGTGGGAAAGGATTCCCTCGTTCGTCAGACCTTCAGTACCACAGACGTTCCCATACAGGGGAGAAACCGTGCAAATGTGGAATATGTGGAAAAGGTTTCACGGGCAGCAACAAGCTGTCGCGCCACATGCGGGTGCACACCGGCGCGCGACCGTACAAGTGTCCGTACTGCGACAAGGCGTTCTCGCAGAGCAACGACCTCACCGTCCACGTGCGGCGACACACCGGCGACAAGCCTTACGCCTGCGACGTCTGCGGCGACCGCTTCATACAGGGTACAGCGCTCCACAATCATCGTCGTGCGCACGGCCACTACCCCGGCACGCAGTCTGTCACGTTCACCGTGTAG
Protein Sequence
MALTSIDIKIENICRTCLTKEAELLSVFNTFVGASTLKNIITSVTGIEFTEGDGLPTTVCSECKAKAETAYDFKSRSRESDMALQGLIKKEKLNDNHDFESGVNVKIENIAENEEMYMDLDFNISLSNSNDNFDDEEIKSLDEPHTSLQLDHKELLESSAASTRSKKKIDTGQNMYDTEHKVAYCPMCDTSYADVETLTKHMWHKHSDIMGPKKRGRPKKIQTSAILKKLSENVMSLSTCEFCKMDYKTKEKLDSHMHIHKDTLLTNCLVCKKVYLSKAYYQQHKCQRNHIDKLQNAEPPDPNIIQDRSAQVLLAEIVKFSDAQQEAIERVKVCEACGRVCRSPAELQQHRDADHPELSASCQLCDKTFASVKTAERHRVTCERVERKFVCNTCGRRFAFEISLNKHILQSHAGQRVSVDFISRQKRQVSCDLCGKTFPSKEQLVRHSIVHKTPKKYECDKCKKKFTRKGNLKSHILRVHESGRSSKASGLCLYCGRSFNNSSNLIVHMRRHTGEKPYQCDFCGKGFPRSSDLQYHRRSHTGEKPCKCGICGKGFTGSNKLSRHMRVHTGARPYKCPYCDKAFSQSNDLTVHVRRHTGDKPYACDVCGDRFIQGTALHNHRRAHGHYPGTQSVTFTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01217687;
90% Identity
iTF_00404032;
80% Identity
iTF_00404032;