Csei020448.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- -
- Assembly
- GCA_905187585.1
- Location
- LR994549.1:10426205-10436254[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.74 8e+02 0.6 0.7 35 43 1 9 1 10 0.89 2 13 7.6e-06 0.0082 16.6 1.8 3 44 42 81 40 81 0.90 3 13 0.74 8e+02 0.6 0.2 11 25 97 110 89 133 0.67 4 13 1.9e-10 2e-07 31.3 2.2 3 43 176 211 175 212 0.97 5 13 1.5e-05 0.016 15.7 2.7 3 43 244 283 242 284 0.87 6 13 0.74 8e+02 0.6 0.2 11 25 300 313 292 336 0.67 7 13 7e-08 7.6e-05 23.1 2.2 3 44 383 419 382 419 0.95 8 13 5.5e-11 6e-08 33.0 3.0 3 44 452 492 450 492 0.96 9 13 0.027 29 5.2 0.4 14 43 508 541 498 542 0.86 10 13 0.0054 5.8 7.5 0.1 6 43 581 616 579 617 0.82 11 13 5e-13 5.4e-10 39.6 2.8 3 44 694 734 692 734 0.97 12 13 7.5e-11 8.1e-08 32.6 1.7 3 43 765 804 763 805 0.93 13 13 1.1 1.2e+03 0.1 0.3 4 29 815 838 814 856 0.78
Sequence Information
- Coding Sequence
- ATGTTTCGACACATGCAAAGGAATCATGCCGATATTTACAGCACTAAAGTTGATAAAAAAATTGTGAAAAAAGAAAAGAAGACGCCAACTTCACGAAAACGGGGAAGGCCTCGCCAGAGTTGGGTGTGGAGATACTATGCGTGCAACGTAAGCAACGCTGCTTGCAAGCTCTGCAAGAAGGTGTTTCAGCTCCCAAAAGACAGTACCGGCAACCTCATTAAACATCTCATGAAGTTACATAAAGAGGTCATTAATAAAGGGTGGATTTGGTTAGTCTTTGAAAAGGACGACGATGATGACAAATATTCTTGCAGAATATGTAGCTTTAAATGTGCTAAGACGGACGACTTGTATAAAGATATTGTTGTGACAATATATAACCATTTGAAAACAGAACACGGCCTGGAGTCGGGTGATCAAGTGCGCACTGTATCCGACGATGTAAATGTAAAAAATGAAAAAGAAAAAATAGAGGAAAGTGATAAAGAAACTAAAGAAGAAAAAAAACGTAAAAGTCGGCGCTGGGTTTGGGAACACTTCGATAAACTATCAGATACAACACTCCGGTGTAAACTGTGCAAGGAGTCAATAAAGTACGCTTCTAACATGTTTCGACACATGCAAAGGAATCATGCCGATATTTACAGCACTAAAGTTGATAAAAAAATTGTGAAAAAAGAAAAGAAGACGCCAACTCCACGAAAACGGGGAAGGCCTCGCCAGAGTTGGGTGTGGAGATACTATGTGTGCAACGTAAGCCACGCTGCTTGCAAGATCTGCAAGAAGGTGTTTCAGCTCCCAAAAGACTCCAGTACCGGCAACCTCATTAAACATCTCATGAAGTTACATAACGAGGTCATTAATAAAGAGTGGATTTGGTTAGTCTTTGAAAAGGACGACGATGATGACAAATATTCTTGCAGAATATGTAGCTTTAAATGTGCTAAGACGGACGACTTGTATAAAGATATTGTTGTGACAATATATAACCATTTGAAAACAGAACACGGCCTGGAGTCGGGTGATCAAGTGCGCACTGTGTCCGACGATGTAAATTTAAAAAATGAAAAAGAAAAAATAGAGGAAAGTGATAAAGAAACTAAAGAAGAAAGTGAAGACGACAGTAAACGTAGAAGTCGGCGTTGGCTATGGGAACACTTTGATAAGATAAACGATACAACACTCCAGTGCAAGCTGTGCGAGCTACCAGTGAAGCATTCCACTAATATGTTGCAACATATTAGAAGGAAACATTCCGATCTATACAAAACTAAAGTGGATGAAAATGTTGTAATCGAAAAAATTAAGGACAAACCTCTGCCACGGAAACGTGGTAGACCACACCGGAGTTGGGTGTGGGCATATTTTGTCCGCACTTCAAAAAATCGCGCCACTTGCAAGATCTGCGACAAGGCTATATGCTCCAGTTTCAGCACAACTGGTAACCTTATTATCCATCTGAAGAAAGTTCATAAGAAGGACGCAGGTTGGGTCTGGTTAGTCTTTGAAGAAGAAGATGAAAGTGACAAATATTCATGCAGAATATGCAGCTTCAAATGTACTAAGACTGAAGATTTGAAGAACGATATTAAGACAATATGTGACCATTTGAAAACAGAACACGGCCTGGAGTCGGGTGAACAAGTGTCTACGGTTCCTGATGATAAAAATAAAGTAGTTATAAAACATATTAAAGATGGAAGCGATCAAGATAATGCTGTCCAAGATGTTATATCTATGTACTTTACCAAGGAATCGTCCGATCAACTGAAATGCAATATTTGCGCCACGGTATTGACGACAGATGATAATAATACAGTACCTAAAGAGCACATCAGGGACTCTCACACAGGCGTTTACGAGTTGCACAAGGATATTCTGGAATGTTCCATGGGATACCAGATAGAGTTCCTACAATTCAGTGTGTCGGATAGCAAAACTCAACCTGTGATAATAGAAGAGATATGCGAGACTCAATCTGAAGTTATCCAGGATCAGTTGCCCAAAGGTGTCGAGAACAGGCAGTATATATTTCTATCAAGCGTAAAAAGTGATGATACATGCAGAAAACGGAGCTGGGTGTGGAAGTATTTCGATAAATTGTCGCAGACCATATTTCGCTGCAACCTTTGCAACGTCGTTCTATCGATAAAGGGGTGCAATAGTAACAATATGAATCGTCACATCCGCTCGAGACATCCGGTCATCTACGGCAGTGAACTAGAGATGAAGATCAAAAGTGACGAGAAGCGGACGGATATAATCAGCAAGGGAAAGCCGCTACGTAGTTGGGTGTGGACGTATTTCAACCGTGACTCGAGGACTCGCGCCACTTGCAAGCTGTGCGACAAGACCATCAACCACGGGGGCAACGCCACCGGCAACCTCAACAGACATCTGAAGATCATCCACGAGAAGAATGATGATCCCCACTACTGGATTTGGAAAGTTTTTGATAATGACTCTGAAGACTATTATTCGTGCAAATTGTGCACTTTCAAACTAGCGAAGACCGAAAATTTTGATATCTGCGTGCAGGTAATACTTGACCATTTGAAAGACCAGCACGCTTTGATGTCGGCGGAGCAAATTTTCACTGTTAAAGACTACGAAGAGGATGAAGGATGA
- Protein Sequence
- MFRHMQRNHADIYSTKVDKKIVKKEKKTPTSRKRGRPRQSWVWRYYACNVSNAACKLCKKVFQLPKDSTGNLIKHLMKLHKEVINKGWIWLVFEKDDDDDKYSCRICSFKCAKTDDLYKDIVVTIYNHLKTEHGLESGDQVRTVSDDVNVKNEKEKIEESDKETKEEKKRKSRRWVWEHFDKLSDTTLRCKLCKESIKYASNMFRHMQRNHADIYSTKVDKKIVKKEKKTPTPRKRGRPRQSWVWRYYVCNVSHAACKICKKVFQLPKDSSTGNLIKHLMKLHNEVINKEWIWLVFEKDDDDDKYSCRICSFKCAKTDDLYKDIVVTIYNHLKTEHGLESGDQVRTVSDDVNLKNEKEKIEESDKETKEESEDDSKRRSRRWLWEHFDKINDTTLQCKLCELPVKHSTNMLQHIRRKHSDLYKTKVDENVVIEKIKDKPLPRKRGRPHRSWVWAYFVRTSKNRATCKICDKAICSSFSTTGNLIIHLKKVHKKDAGWVWLVFEEEDESDKYSCRICSFKCTKTEDLKNDIKTICDHLKTEHGLESGEQVSTVPDDKNKVVIKHIKDGSDQDNAVQDVISMYFTKESSDQLKCNICATVLTTDDNNTVPKEHIRDSHTGVYELHKDILECSMGYQIEFLQFSVSDSKTQPVIIEEICETQSEVIQDQLPKGVENRQYIFLSSVKSDDTCRKRSWVWKYFDKLSQTIFRCNLCNVVLSIKGCNSNNMNRHIRSRHPVIYGSELEMKIKSDEKRTDIISKGKPLRSWVWTYFNRDSRTRATCKLCDKTINHGGNATGNLNRHLKIIHEKNDDPHYWIWKVFDNDSEDYYSCKLCTFKLAKTENFDICVQVILDHLKDQHALMSAEQIFTVKDYEEDEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -