Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994556.1:6847177-6849861[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.1e-07 0.00031 20.9 0.0 4 38 15 50 12 55 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.1e-07	0.00031	20.9	0.0	4	38	15	50	12	55	0.90

Sequence Information

Coding Sequence: ATGGATTACCCCAACAAAAAGAATAGAAAGTACTCGGAGCTTGATCTCAAAACCGCCATTGAAAATGTTTTGAGTTCAAAAATGACAGTTTACAGAGCGTCTAAGGAGTTTAAGATTCCATGGTCGACGTTAAAGGAGAATGTGATGAAGTACAAAACTCTACGAGAGGTTAATCAAAATACACAGATAGTAATGTCCAAGATAGGGAGACCGTTTGCGTTACCTGTTGAAATGGAACAAAAGTTATTGGCCTACATAATTGAAATGCAAGAACGTGGCTTTGGTCTTACAGTAACAAAAATAAAGCAAATTGCATTGTCTTTAGCAAAAGCTGCGAATATAAGCTGCACATTCAATGACGAAAAGGGATCTGCAGGTTGGAATTGGTGGGTGAAGTACAAAGAACGCTACGGGTTGTCTTTGCGAACACCTGAAAATCTTTCAGCAGGTAGAGCGATTTGCTCAAATCCGGTTGTTTTGGAAGATTTTTATGAAAAATTAGAAAAAGAGTTAAACGAACATGACATTCCGCCCGAAAGAATATGGAACTGTGATGAGACTGGTCTGATGTTTGTCAACAAACCCAACAAAATTGTCACAAGCATTGGAAAAAAATATGTGTATAATAGAACATACACAGAAAAGGGTACGACAACCACATTACTGGCGTGCATAGATGCGACAGGATGTTATATCCCTCCATTTATTATATTCAAAGGGGTAAGAATCATACCACAACTGACAAATGGATTTATGCCAAACACCCAAGTACGCTTTTCTCCAAAGGGATGGATCACGGGTGAACTATTCCTAGATTGGTTGAAATTCTTTGTTCGATGTATCCCTCCAGCAAGACCCGTTCTATTGATAATGGATTCGCACGCTAGTCACGTTATGCCATCTGTACTGGATTACGCTCGATCACAACGTATAATATTGTTTACAATACCTTCACACACGAGTGCCATTCTTCAACCACTTGATGTCAGTGTTCATCGACCTCTGAAAGTTGCCTGGAGGACGATAATCGAAGCTCACAAAATTAAGAATCCTTGCGACACCCCAACCCGCTATGATTTTCATAAATTTTTTACCCCTGCATTCGAGAAAAGCTTCACGCCATCAAACATACGAGCTGGGTTCAAAAAAGCGGGTATCTATCCATTAAACAAAAGAGCTGTGAATCCACTGGCACTTGCTCCATCAAAGCTGACAGACAAACCGTTTCCGGAATCGAGAAAAGAGGTCACATGTGATGAAGATGAACAAACCCTGAAATCCTGCACATCTCAAATTGAACTTTTAGAGGAAATCGTATATTGTAACATTGACCAAGAAAATGGGGCCCTGGAGATGGATGATCCTGTATGTGATCCTCTTAATTCAGTGAGTTCTCAATTAAAATGTAGAGAAAATAGGTCTCTAAAGACAGATGACCCTGTTTGTGATGCTCCTCATTCAGCTAGTTGTCAATTAGGATGTACAGAAACTGAGTCTTTCGAGACTTATGACCCTGTGTGTGATCCTCCTCATTTAGTGGGTTCTCAATTTAAATGTGCCAAGCTACCCGTCCAGCTTGAAGAAGACAAAATTTTGGGTAATGTTCCGGATCAGACTACGGATTCGCCTATCATTTCTCAACAAAAACTTAAAAGAACTGATAGTACAGATGTGTTTGAGAACGACAATTCTGCAGAAGAAAAATCCAGCAGCCTCAGAAAAGTAAGGATGCCCTCAAAACGTTATTCTTATAAAGACACATATTATAATGACACGATCTCAACTGCAGCTGTATTAGGAATTTCAGACTCCTCCAACCAACACTGTCCTGAAATTACAGCCCAAGATTTTGAAGTAATCCTTGCAACAACTGTATTGAAATCTCCTGACACATATAATCAACAATATCCCGCATTAAAAACGTCACAAGACTCCTCCATCCAAACCAATTCTGAAATCATAACAGTACAAGGCTCCCCCATTCAAGGAATTTCATTTGAAAAAGTTGAACCACTTAAACAAAATAAAACATGCAAAATTAGAATTTTAGAAGAGGTTATATTTCCAGCTCCGGTACCAAAACAAAAGCTTCCAGATAAATTAGACGAGATTTTGAAAGTTCCCAAGTTAGAGCAGAATCAAAATAAAAAAAAAAGAAGGACCGTCCCTCATGCACGATGTTTAACTCCTATTGCTGAAAAGAACCTAAACGACGCTGCTGAAGCCGGTATATTATCAGGAACTAAGCGATCTAAAAAAGCCAATAATCATCTAGGAGCAGCTGCCGTTTCTGGTACATCAGGGACTAAGCGACTAAAGACAGCTAACAAGAACATTGATGATGCTGTTGTTACCGTCACGTCTGGAACTCAGCGATTGGCGAAGAACTTATATAACACTGCTATTCCTAGCACATCAAAATTTGAAAAAAAAGCGAAAAGAAGTAATAGAGCAAATAAAACGAGCACTGCACCTGCGAAGCAGAAGAAAAATAGATCTGAAGACGACGATTGGCTATGTGCAATATGCAACAGATGGTACTCAGAAGATGCTGCATCTAAAAATGGAGCAGACTGGATTTCTTGTTCCTTCTGCATCAAAACGTATCACGTACATTGTCAAACTCAAGAATGTGAGGCTAATACGACGATTTTTAAGTGTGATATGTGTTACGCCCAAGAATAA
Protein Sequence: MDYPNKKNRKYSELDLKTAIENVLSSKMTVYRASKEFKIPWSTLKENVMKYKTLREVNQNTQIVMSKIGRPFALPVEMEQKLLAYIIEMQERGFGLTVTKIKQIALSLAKAANISCTFNDEKGSAGWNWWVKYKERYGLSLRTPENLSAGRAICSNPVVLEDFYEKLEKELNEHDIPPERIWNCDETGLMFVNKPNKIVTSIGKKYVYNRTYTEKGTTTTLLACIDATGCYIPPFIIFKGVRIIPQLTNGFMPNTQVRFSPKGWITGELFLDWLKFFVRCIPPARPVLLIMDSHASHVMPSVLDYARSQRIILFTIPSHTSAILQPLDVSVHRPLKVAWRTIIEAHKIKNPCDTPTRYDFHKFFTPAFEKSFTPSNIRAGFKKAGIYPLNKRAVNPLALAPSKLTDKPFPESRKEVTCDEDEQTLKSCTSQIELLEEIVYCNIDQENGALEMDDPVCDPLNSVSSQLKCRENRSLKTDDPVCDAPHSASCQLGCTETESFETYDPVCDPPHLVGSQFKCAKLPVQLEEDKILGNVPDQTTDSPIISQQKLKRTDSTDVFENDNSAEEKSSSLRKVRMPSKRYSYKDTYYNDTISTAAVLGISDSSNQHCPEITAQDFEVILATTVLKSPDTYNQQYPALKTSQDSSIQTNSEIITVQGSPIQGISFEKVEPLKQNKTCKIRILEEVIFPAPVPKQKLPDKLDEILKVPKLEQNQNKKKRRTVPHARCLTPIAEKNLNDAAEAGILSGTKRSKKANNHLGAAAVSGTSGTKRLKTANKNIDDAVVTVTSGTQRLAKNLYNTAIPSTSKFEKKAKRSNRANKTSTAPAKQKKNRSEDDDWLCAICNRWYSEDAASKNGADWISCSFCIKTYHVHCQTQECEANTTIFKCDMCYAQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00403745;
90% Identity: iTF_00403745;
80% Identity: iTF_00403745;