Csei019999.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- -
- Assembly
- GCA_905187585.1
- Location
- LR994549.1:4622012-4624793[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-07 0.00015 21.9 0.0 1 35 164 199 164 202 0.87
Sequence Information
- Coding Sequence
- ATGAACGAAAACAAAACGTACTTGAAGTATAAAGATGTTTGTAGATGTTGCTTGGATAATCCTGGAACTAAGAATATGTGGGCTGAATATTTAAGCGACAATGATAGAGAAGTATATGGGGAAATGTTAAGTGATTGCTTTGGTGTTTCGTGGGATGCAGACAATGAAGAACTAATATGTGATTCCTGTATTCATCGATTGAGAGAAGCTGTTAAGCTAAAGATTGAGTTTTTAGCTGCACAAGAGGTTTTGAGAGAGAATATAATGTTAGAAAATGGCAAACTGTTGATTAAATTTGAAGCCCAGAATGAACAAGAATATGATGAATATGAAGTTTTAGAAACATCTGATATGTTTGCCATGGAACTAGATGATACTGTCAATGATATGGGAGATAATATTTCTGTGGATTCAAATAATCCAGCAATGTTAAGGATATTTCAAAGTATAACCAACAAAACAAAGCGAAGGAAAGCATACAAATTGTATACAAAGGATACAATGGATAAAGCAATAGAGGCTGTCAAGGTGCACGGTAAATCTATGTCGGAAGCAGCAACAAAGTTTTGTGTGCCCCGGAAAACTTTGGCACTACGCCTTGCACAACCTGTTGATGAACATGAGGCAAAACACGTGGGCAGTGAAAAGAAGTTAAAACTAGTGAATGAAATTCAAATCCTTCTACAAAATACCAATGCTGTTCCATTCAAGACCAAAATCACCAGACGCTTTTGCGCCTTCTGCTTCATCGATGGACCAACGTTTGATGACAATATTGAATTGAGATCACACATGAAATTTTATCACAAAACCAATTATATCCAAGATGTTGAATTTATGATGCGACCTTGGCACATCAATGAAGTCCTAAAATTGGACATTACAAACCTGCAGTGCACGTCCTGCAACATAAGTATCGACGATTGGAATTCCATGTTTGTACATTTTGCGCAAACTCACGAACTGGAGTTCGATGAAGCTTATAATAAAATTATACCATTTTCCCTTACGATCGACAACAAATGTACATTGTGCTACGATACCTTCACGACCTTTGGTAATCTGGACGTACATATGAACGCGCACTATTGCAACTACATATGCTACGAATGCGGGGACCCCTTTCTGTCTTCTACTCGCCTCGATGCCCACCTAAGACTGCACAAGACTGGAAAGTTTGTGTGCAAAATGTGCGACAAAGTATTTGCAATGCAGCAACATGTTATCCGACACATTGAGCTCGACCACAGTGATAGTGCTGTAGACGTTAAATGGATTTCCAATAGTAACGCCAATGACAAAAGTGAGAATTGTACTGAGATGCCCTGTGAATATTGTGGCACGTGTTTTAACTCCAGTGCCTTTTTGAATAACCATATAAAGAAAATGCATATGAAAAAAAAACAGAAGAGAGCTAAGAAGAATTATGTCTGTGGTGTGTGCGGGACAGAATTTGAAAAGTTTGTAAGCTTGAAATACCATTGGCGTGAACATATGGAATTGATTCCTTTCCAAAAAATTGAAAATGTTAGTCTTACTGAAGCCTAA
- Protein Sequence
- MNENKTYLKYKDVCRCCLDNPGTKNMWAEYLSDNDREVYGEMLSDCFGVSWDADNEELICDSCIHRLREAVKLKIEFLAAQEVLRENIMLENGKLLIKFEAQNEQEYDEYEVLETSDMFAMELDDTVNDMGDNISVDSNNPAMLRIFQSITNKTKRRKAYKLYTKDTMDKAIEAVKVHGKSMSEAATKFCVPRKTLALRLAQPVDEHEAKHVGSEKKLKLVNEIQILLQNTNAVPFKTKITRRFCAFCFIDGPTFDDNIELRSHMKFYHKTNYIQDVEFMMRPWHINEVLKLDITNLQCTSCNISIDDWNSMFVHFAQTHELEFDEAYNKIIPFSLTIDNKCTLCYDTFTTFGNLDVHMNAHYCNYICYECGDPFLSSTRLDAHLRLHKTGKFVCKMCDKVFAMQQHVIRHIELDHSDSAVDVKWISNSNANDKSENCTEMPCEYCGTCFNSSAFLNNHIKKMHMKKKQKRAKKNYVCGVCGTEFEKFVSLKYHWREHMELIPFQKIENVSLTEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404242; iTF_00406266; iTF_01217864; iTF_00164787; iTF_00164301; iTF_00933696; iTF_00934264;
- 90% Identity
- iTF_00164787;
- 80% Identity
- iTF_00404242;