Csei020190.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- clz9
- Assembly
- GCA_905187585.1
- Location
- LR994549.1:6813785-6816931[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-08 1.5e-05 25.1 0.0 2 40 15 53 14 58 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGTAAATACAAGAGAAAGCGAGATAAAGAATACTCTAAAGATGATTTGCAGAAGGCTGTAGAGGCGGTAAAAACTAAAAAAATTAACAGTTATAAAGCATCAGAAGTGTTTGGTGTTCCGAGGTCTACCATAGTAGCGCATATAACTGGTACTCGAGGTCAAAAGCAGCCAACACCTGGCAAACCTACGGTGCTATCCAGGCAACAAGAGGAACGGCTTTCTTATTTGCTACATGTCATGGAAAAAGCCGGCCATCCTTTAACAAGGAAAGAACTCAAAACTTTAATTGGTGAATATATACGCAGAAATGGAATAGTCACCCCTTTTAAAAATGATATTCCTGGGGATGACTGGTGCCAAGGTTTCATGAAAAGAAACAATTTGTCAACGAAGAAGCCCCAAAGCGTCGAGGTGGCCAGGAAAAACGCTTGTAACCCATTTACAATATATCATTATTATGACTTATTGGAATCAGTTGTGCGGGATTTAAATCTGACGGACAAACCAGAAAGGATATTTAACGTCGATGAAACGAGTTTTTGTAATGACCCCTCATCAAGCAAAATAATTGGTCAAAAAGGTTACCCCTCAACAAGGACAACAAGCGGCCCTGGGCGAGATAACACAACAGTGCTTCTGGGAGCCAACGCACGTGGTGATAAAATACCCCCGCTGATCGTCTTTAAGGGTAAAAGTCTTTGGAACGAATGGTTTTATAAAAATGAACATGTGCAAACGGCATATTCCGTCAGTACAAATGGATGGATGGAGACGACAATTTTTGAAAAATATATTAGAGACGTATTTATACCAGCCATAGGAAGTGAACGGCCAGTGCTTCTTGTATATGATGGCCACAAAACACATGTTGACCTGGGAGTTGTGGAATTGGCCGTTGATAACAATATCACAATTTTGAAGTTACCGCCTCATTCCTCACATGTGCTACAGCCGTTAGATGTAAGCACGATGAAGTCAATGAAAGTGCACTGGGAGGACACCCTCGTGAAGTGGCAGCGGCTCCACTCTGGTACAAAAATGCCAAAAAGTGAATTTTCAAGATTACTTACTGAAGTTTGGGACAATCTTAATCCAGCAATCATACAAAATGGTTTCAGAAAGTCAGGAATTTACCCTGTAGACAGATATGTGATTCCTAAAGATAAGTTTGATATGGTGGCGTTGTCAAAATGGGAAAAAATTCTTAAAGATGGATTAAAACTAGATGAAAACAATAAGGAAGATCCAAATAGTGAGGAAAGACAATGTACAGGAGAATTGGAAGAAAACAATAATGAAGATCTAAATAGTGAGAAAAGACAATGTATAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTACAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTATAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTACAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTACAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTATAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTACAGGAGAATTGGAAGAAAACAATAAGGAAGATCTAAATAGTGAGAAAAGACAATGTACAGGAATGGATCGAAAGCAAGTATCGCAGACCCCAGCCATTTTGAACGACAATCCCAATTCATATGCTGAAGACGTGCCTTCACTCTTGACCCTGGTTTTGAATCATATCAATGATCAACAGAACATGAATAATTTAAAACAAATTCAATTTAGAAAGGCCGAAAAATGTAAAAGGACAGGTAAATGTGATAATGTGACCACATCAAAAAATAAAATAGTGAAACCCCCTGACACTATTACGCTTGATACTCCACATAATAATTCTGCAAATAAAGATATGAATGCAGGCACCTCTTCAATTTCCATTCTAAATAATAAAATTTTAAACAAAGGGGATCCCGAATTCGTAAACATATCATTTGAAGAGTTGTTGCTAAAAACCATCTCTCGAAACAATCCATCGACAAATCCACGAAAAAAGGTACCGGGAGGTGCAGAAATACTCACTTATAAAGATTTTATTAATTCTATGAAGGAAGAAAAAGAAAAGAAAGAATTAGAAGCAAAAGGAAAAAAATTAGTAAAGGAAAGAAAGAAAGAAGAAAAAAAATTAGAAAAGGAAAGAAAGAAAGAAATGAAAGAGATACTAAAAAGGATAAAAATTGAAAATAAAGGTGAAACTAATAAGAAAAGTAATAAGAACAGGAAAGCGAATAATAGGAAAAGTAAAAATATTCGGATTCAGAAAAACAAGAAAATTATATATGAAAGTAACTCTGACACTGAAGACGATTCTTTATACAGTTTGAAAGATTCGTCAGATGAAGAAGATTCTACTGATTTTTTTCAGACCTTACTAAAGGAAAAAAATGAAGAGGAAGATAATATGTTTATAAATGGAAAAAATCTGAACTTATCACAGGGATCATCTAAATTGGTTGAAACCATTACAACCACTGAAAAGAATAGAGTATATCAGATAGAGGACATGTCGAAAAGCAATAATGAAAGAAATACTATAAAGAAATATAAAAGAAAATATACCCAAAAACAGAAAGACTTGAACGGAAAGCCAAGTATAGTATCTAGCAAGAGGACAAAAACTGCCGAAAAAGTGGAGGATAGCAACAATCTTTACAAGGATAACAATTTCCCCAGTACTTCAAAAGAAGAATCGAAACCGGTTTTATGCCAAAGTCCCAAAGAAGGTCAATTTGTCTTGGTCAAGTTTTCTACAGCCAAAGGTAAAAAGGATTACAAATACGTTTGTGTCATAGAAGGAATCAACGACGAAAGAATTGTTGTCAAAGGCTTAAAGTCCTTTAAAAAGAATAAAAAGATATTTCGCGTTGTAGAAAATGACATATCAATTATTGATCTGACCCAAATTGTTGCGTATCTTCCCACACCAGTGTGTGACGATAGTGAAAAAGTGTTTGTTTTTCCTTTCGATGTTGCAATTGCTGAATTGTAA
- Protein Sequence
- MVRKYKRKRDKEYSKDDLQKAVEAVKTKKINSYKASEVFGVPRSTIVAHITGTRGQKQPTPGKPTVLSRQQEERLSYLLHVMEKAGHPLTRKELKTLIGEYIRRNGIVTPFKNDIPGDDWCQGFMKRNNLSTKKPQSVEVARKNACNPFTIYHYYDLLESVVRDLNLTDKPERIFNVDETSFCNDPSSSKIIGQKGYPSTRTTSGPGRDNTTVLLGANARGDKIPPLIVFKGKSLWNEWFYKNEHVQTAYSVSTNGWMETTIFEKYIRDVFIPAIGSERPVLLVYDGHKTHVDLGVVELAVDNNITILKLPPHSSHVLQPLDVSTMKSMKVHWEDTLVKWQRLHSGTKMPKSEFSRLLTEVWDNLNPAIIQNGFRKSGIYPVDRYVIPKDKFDMVALSKWEKILKDGLKLDENNKEDPNSEERQCTGELEENNNEDLNSEKRQCIGELEENNKEDLNSEKRQCTGELEENNKEDLNSEKRQCIGELEENNKEDLNSEKRQCTGELEENNKEDLNSEKRQCTGELEENNKEDLNSEKRQCIGELEENNKEDLNSEKRQCTGELEENNKEDLNSEKRQCTGMDRKQVSQTPAILNDNPNSYAEDVPSLLTLVLNHINDQQNMNNLKQIQFRKAEKCKRTGKCDNVTTSKNKIVKPPDTITLDTPHNNSANKDMNAGTSSISILNNKILNKGDPEFVNISFEELLLKTISRNNPSTNPRKKVPGGAEILTYKDFINSMKEEKEKKELEAKGKKLVKERKKEEKKLEKERKKEMKEILKRIKIENKGETNKKSNKNRKANNRKSKNIRIQKNKKIIYESNSDTEDDSLYSLKDSSDEEDSTDFFQTLLKEKNEEEDNMFINGKNLNLSQGSSKLVETITTTEKNRVYQIEDMSKSNNERNTIKKYKRKYTQKQKDLNGKPSIVSSKRTKTAEKVEDSNNLYKDNNFPSTSKEESKPVLCQSPKEGQFVLVKFSTAKGKKDYKYVCVIEGINDERIVVKGLKSFKKNKKIFRVVENDISIIDLTQIVAYLPTPVCDDSEKVFVFPFDVAIAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248057; iTF_01217438; iTF_01217439; iTF_00164282; iTF_00164283; iTF_00934683; iTF_00934682; iTF_00164285; iTF_01217437;
- 90% Identity
- iTF_01248057;
- 80% Identity
- -