Basic Information

Insect: Culicoides brevitarsis
Gene Symbol: ZBTB47
Assembly: GCA_036172545.2
Location: CM070087.1:24657521-24669334[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00096 0.037 14.3 0.3 2 23 197 219 197 219 0.96

2 11 0.00062 0.024 14.9 3.8 2 23 225 246 224 246 0.95

3 11 1.3e-06 4.8e-05 23.4 1.2 1 23 250 272 250 272 0.97

4 11 5.9e-05 0.0022 18.1 0.2 1 23 279 302 279 302 0.97

5 11 0.0043 0.16 12.2 2.0 2 23 314 335 313 335 0.96

6 11 0.0043 0.16 12.3 0.3 2 23 344 367 343 367 0.95

7 11 0.03 1.1 9.6 0.2 1 23 371 393 371 393 0.98

8 11 2.7e-05 0.001 19.2 0.6 1 23 400 423 400 423 0.96

9 11 0.021 0.8 10.1 0.4 1 23 431 453 431 453 0.97

10 11 0.00055 0.021 15.1 0.6 2 23 460 482 460 482 0.96

11 11 0.00085 0.032 14.5 7.3 1 23 487 511 487 512 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00096	0.037	14.3	0.3	2	23	197	219	197	219	0.96
2	11	0.00062	0.024	14.9	3.8	2	23	225	246	224	246	0.95
3	11	1.3e-06	4.8e-05	23.4	1.2	1	23	250	272	250	272	0.97
4	11	5.9e-05	0.0022	18.1	0.2	1	23	279	302	279	302	0.97
5	11	0.0043	0.16	12.2	2.0	2	23	314	335	313	335	0.96
6	11	0.0043	0.16	12.3	0.3	2	23	344	367	343	367	0.95
7	11	0.03	1.1	9.6	0.2	1	23	371	393	371	393	0.98
8	11	2.7e-05	0.001	19.2	0.6	1	23	400	423	400	423	0.96
9	11	0.021	0.8	10.1	0.4	1	23	431	453	431	453	0.97
10	11	0.00055	0.021	15.1	0.6	2	23	460	482	460	482	0.96
11	11	0.00085	0.032	14.5	7.3	1	23	487	511	487	512	0.96

Sequence Information

Coding Sequence: atGTCTAGCTTGGAGCAAGTTTGTCGTTTGTGTCTAAATCCGTGCGATTCGGACAACGTCGACTTGGATCACGGATTTAATGCGAGAATGCGCGCCGctattgaggaaatttttcaaattttggacATCGCAGAGACGAATTTCccgaaaaaagtttgtttgttgtGCAAAGAGAAAACGCTCGAGTTCTATAATTACTTCACATTAGTCAAAAGTAACCAGAATATCTTGAGAAATGCACTCGGGAAGAAGGTGgaaacgttaaaaattgaaccaaaCACGTCTGAGGAGTCGATACAATTTGTTGGGATCTCAGGTTCGTCGCGGCAAAAACCTTCTCCGGAACAGGAACAAGTCCTCGTCGAAGTCTGTGTCAAAGAAGAAGgcgaaaaaatcgattttgatCAACTTTATGACGAACGAGACCCGGAAGATTTCCTCCCAGAAGCTgtcaaaatcgaagaaaagCCAAAATTTGCGAAACCTGTCGCGCCAAAGAAACTTCGCGtcacaaaatcatcaaaatcgaAGTCAACAAAGGACGTTTCTcccaaaaaatacaacaaaaaaggcCAAAAAGGTCATCGGAGTTGCGATTTGTGTGGCGCGACATATGAATATCGCGAGCTTTTGGTGACTCATATGAAGCGAAGGCACATTTTCGAGGATGTCGAATGTaatatttgtcataaaaagttCGATAATAAGGTCAAGTTGCAATCCCACACGGCACATCACAATAAAAAGCACATGTGTGAGATCTGCAGCAAGTCCTATGTGTCGCCGAATCAGCTGAAGAGACATATGCAAGTGCACAAAGTCGTTTCCAATGATTTTATTTGCAGTAAATGTGGGGAGGGGTTTGCGACGAGGAATTTGTTGGCGGATCACGTGAGGAAATCGCATGATGGAGACGATGATGGGCAGCTTTTTACTTGCATGTGTGATATTTGTGGCaaaaagttcttggAAGAAAGCAGCATGAACGTCCACAAAAGAACGCACAACCCAAACATCATCAAAGCCCTTTATTGTCCCGTTAGCACTTGTGGCGAGCGAATGCGCGATCAAGCCCACCTTTCGGAACACATGCAAATCCACAGCATCGTCTACAATTGCACCACCTGCGCTCGCAAGTTCCTCAATGCCGGCGACTTGGCAGACCACGAAAAAACGCACGAAAACGAGCACCGTCCCTTCGAATGCCAAATCTGCCAACGACGTTATTCCAATAAGAATCAACTGAATGTTCATGTGATACGAGTTCATCGCAAAAACGAAGCAAATTTGCACGAATGCGAATTATGCTCGAAAACCTTCTTGGCGGCGTGGGAGTTGCGCGTGCACGAACGAAGCCATTCCAGTGAAAAAATCGCCAAATGCCCCATGTGCGAAAGGTCGTATAAGAGCACGAACGATATTAAGAAACACATGGCTGTGAATCATACGGCAGCACATTATCGGTGTCCTGGCACGGGATGCGATAAGCAATTCAAGACAAAGCTGCATTTCCGGAAACATTTTAAGAAACATCATCCGGAGACTTTTACGTCAGATACGGCGTTGAAGCAATATTGGATCGAGGACAAAGAGGAAATGGCAAATGTGATGGCGATTTATGCGCGAACTTTTTTGAACAGAAACAAGtga
Protein Sequence: MSSLEQVCRLCLNPCDSDNVDLDHGFNARMRAAIEEIFQILDIAETNFPKKVCLLCKEKTLEFYNYFTLVKSNQNILRNALGKKVETLKIEPNTSEESIQFVGISGSSRQKPSPEQEQVLVEVCVKEEGEKIDFDQLYDERDPEDFLPEAVKIEEKPKFAKPVAPKKLRVTKSSKSKSTKDVSPKKYNKKGQKGHRSCDLCGATYEYRELLVTHMKRRHIFEDVECNICHKKFDNKVKLQSHTAHHNKKHMCEICSKSYVSPNQLKRHMQVHKVVSNDFICSKCGEGFATRNLLADHVRKSHDGDDDGQLFTCMCDICGKKFLEESSMNVHKRTHNPNIIKALYCPVSTCGERMRDQAHLSEHMQIHSIVYNCTTCARKFLNAGDLADHEKTHENEHRPFECQICQRRYSNKNQLNVHVIRVHRKNEANLHECELCSKTFLAAWELRVHERSHSSEKIAKCPMCERSYKSTNDIKKHMAVNHTAAHYRCPGTGCDKQFKTKLHFRKHFKKHHPETFTSDTALKQYWIEDKEEMANVMAIYARTFLNRNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -