Cbre005930.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- MAZ
- Assembly
- GCA_036172545.2
- Location
- CM070086.1:9502252-9504084[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0002 0.0076 16.5 1.4 1 21 148 168 148 169 0.95 2 14 2.8e-05 0.0011 19.1 2.9 2 23 178 200 177 200 0.96 3 14 6e-05 0.0023 18.1 0.9 1 23 206 229 206 229 0.94 4 14 2.7e-05 0.001 19.2 7.2 1 23 234 257 234 257 0.97 5 14 0.023 0.86 10.0 0.1 2 21 304 323 303 324 0.95 6 14 0.00015 0.0059 16.8 3.6 2 23 336 358 336 358 0.97 7 14 0.001 0.038 14.2 0.3 2 23 364 385 363 385 0.97 8 14 0.0019 0.074 13.3 3.8 1 23 391 414 391 414 0.96 9 14 0.00032 0.012 15.8 0.2 1 23 420 443 420 443 0.92 10 14 0.0021 0.081 13.2 2.4 1 23 449 472 449 472 0.94 11 14 0.071 2.7 8.4 1.8 3 23 483 503 481 503 0.97 12 14 0.0021 0.081 13.2 1.6 2 23 511 532 510 532 0.95 13 14 0.3 11 6.4 0.4 5 23 541 560 538 560 0.92 14 14 0.00019 0.0074 16.5 0.1 1 23 566 588 566 588 0.97
Sequence Information
- Coding Sequence
- ATGAGCTGCAAAACGATAAATATCGCTTTAGAAATCAGTCAAAAcggaaatttgcaaaaattttacccgatttgtgatgaaaatcggtattcaaaagttgaaattagTTCAAAAGACGTCACTGAAGTTTGTTGTCCTCAATGCAATACGAGtctcatcataaatttttacactCCAAACGAGATTTCTGAGTTAAATGACGAAAAGGAAGCTGTTGATGTCAAAATTGAAGCTGATCCAGAGCCTAAACTCGAAACAATTGACGTCAGTGTCCTTCCGGAGATCGTTTCGCATGACACGAGCACCGATGAAGATCCAAGTTCGCCAATTTCTTCAcctaaaagtacaaaaaagcgaaaaattagtaaaaattcacccgttaaaaggataaaaaattcaaaaattgaagaaaaacccGTTCCTGACTCCATTTCCAGCGATTTTGTATGCGAAATTTGccgaaaatccttcaaaaataaactttcgcTGAGCACGCACAAGCGATATTGCAGCACCGAGCACATGAACACGACTTGTGACGACTGCCAGAAGACCTTCGACTCGCATTATCAGTTCAAAGTTCATATGCAAGTCACGCACAACCTCAATCCGCGTCACAAATGCGACGAATGCGGTCAAGCGTTCATCTCGCGAAGCAAATTATTGGCACATGTCTCGTACAAACACGAAAACATCCGTCACAAATGCGAAAAATGCTCCAAAAGTTTCACGAATCACTTCGATTTGATCAAACACATGCGTCAAAAGCACAATATCGATCGAAGTACGCGACGAAGTTGCACTTTGTGTACGCCGCCGAGACGATTTCATGGCGATTCGCAGCTGGAAGAGCACTTAATCGAGGATCACGGGatcgaaaaagacaaaaatgacgaaaaaaacgaCTTAAAGTGTCCTTTTTGTCAGGCGCTCTTCAAAAATGCTCAAGCTTTGGCGACGCATCGACGATATTGCGACCCGGAAATGCCCCGCATTGGCAAACCGACGTGCCGACACTGCGGAAAATGCTATTCAACGTGGTACGTGGTCAAAGATCACATCAGAACGGAACATTTGGGCATCATGTTGCAATGTGAACTCTGCGGAAAGCAACTCCGATCCAAAAATGACTTAGACGAGCATCTTTTGAAACACGAAAATCCCAAACCCTTCGCTTGTCATCACTGCGAAAAGCGATTTGTCAACAAGGAACGCATCAAAGTTCACATTTTATCGAAGCATTTCGACCGGGCGAACTACATTTGTGAGATTTGTTCGCGGAAATTCGTGCAAGAAAGTGACATGAACAAACACAAAGCGCTCGTGCATACCGACGAACGACCTTTTGCGTGTGAAAAATGCCCAAAAACCTTCAAACTCGAATGTTACTTGAAAAATCACGTTTACTCAGTTCATGTTCCGGATGAATTAAAACCCAAATTTGGGTGTCAGTCGTGCGATTTTGTCACAACGAAGCAGAAATATCTCGAGAATCACaagaaaaatcacataaatgaCGCCTTGAAGGTTCCGTGCGGATTTTGTGGCAAGAGATTCGTTAATGAGAAGCACAAGCAGCGACACGAGATGAATCATACGGGAGAGAGACCCTATAAATGCGAGTGCGGACAGGGATTTAAGACGAGAGTGGAAAAAAGAGCACATTGGATCAAAAGTCACACGGAAGATAAGCCGTTTGAGTGCGAAATTTGTCAAGAAGGTTTCGCGGATCGATGGCAATTTAGGAATCATGTTGCAAGGCATGAAAGTGAGATGGGCGTCACGTTGAGTAAAAGTGTGAGGAagtttatgtttaaatatcggaatatttaa
- Protein Sequence
- MSCKTINIALEISQNGNLQKFYPICDENRYSKVEISSKDVTEVCCPQCNTSLIINFYTPNEISELNDEKEAVDVKIEADPEPKLETIDVSVLPEIVSHDTSTDEDPSSPISSPKSTKKRKISKNSPVKRIKNSKIEEKPVPDSISSDFVCEICRKSFKNKLSLSTHKRYCSTEHMNTTCDDCQKTFDSHYQFKVHMQVTHNLNPRHKCDECGQAFISRSKLLAHVSYKHENIRHKCEKCSKSFTNHFDLIKHMRQKHNIDRSTRRSCTLCTPPRRFHGDSQLEEHLIEDHGIEKDKNDEKNDLKCPFCQALFKNAQALATHRRYCDPEMPRIGKPTCRHCGKCYSTWYVVKDHIRTEHLGIMLQCELCGKQLRSKNDLDEHLLKHENPKPFACHHCEKRFVNKERIKVHILSKHFDRANYICEICSRKFVQESDMNKHKALVHTDERPFACEKCPKTFKLECYLKNHVYSVHVPDELKPKFGCQSCDFVTTKQKYLENHKKNHINDALKVPCGFCGKRFVNEKHKQRHEMNHTGERPYKCECGQGFKTRVEKRAHWIKSHTEDKPFECEICQEGFADRWQFRNHVARHESEMGVTLSKSVRKFMFKYRNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -