Cbre007244.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_036172545.2
- Location
- CM070086.1:20416450-20419416[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.75 1.2e+04 -4.2 0.5 93 110 53 70 39 81 0.44 2 4 0.28 4.3e+03 -2.8 6.4 41 104 204 273 197 291 0.60 3 4 1.6e-91 2.4e-87 292.2 14.1 2 218 473 672 472 672 0.91 4 4 0.08 1.2e+03 -1.1 2.3 45 95 680 731 670 754 0.46
Sequence Information
- Coding Sequence
- ATGAACCCCGTAGTAGAAACTTTGGTCATTGAGACCGTCGTTGAGACAGCGCCAATAATCGCCGATTGTGATGACTTCCAATGCGTTGCAGAGGAAGATGATCCCCTAAGTGATCCGTTGTCCACGAACGACACGCCCGAAAAAGATGAATTTCCGTCAATTAACGACGAAGAAGACGACGAAAGTCAAACAACTGACAAAGAAAAGGACCAAACTATTCGACTAGTTAATGTAAAAGAGCTTACAGAtagtaaaattgaaatttcgtgCGAAACAAAGGCACTTCCCGTAAAACGACCAGAACCACAACCATCGTGCTCGAAAGCGAGCGAACCAAATTTCGAGTTTGACGACTTGGAAGACTTGATTGAATCGAGTCGCATCGAAACGAGTTTCAATAAGAAGAAATTCCAAGAAGAACCGCGACCTTCGACGTCTAGTGCATTGACGAGCGGCGACGAAACATGGAAATTACAGGAAATTATCGACGAGACATCGATTGCGTCATCGGTCGATAGTGACATAACTTCAAATGACGCTCCTCTAGAGGCGGAAAATGCTGAACTCGTCGATGATGAGGAGAAAAAGTCTCGTTTTGATGACGAGACATccgtttcttcatttttattggaaGACTTTGAGGACcaaataacacaaaatgtCGTGAATAAGAGTAACGTTAGTCAAAGTAGCTcgcaaattgaacaaattgaaTCATCGTTAGATGAAGAACCAGAATTGACACAAACGAAAGACGCAAAAGAACAAGTCGAAGTAACTGTGATAAGTGAAGACATGAAAGAAAAGCCAGAAATTGagacaaaagaagaagaacaagAAGAGAAACAGACACAGCCAGTAGAAATATTACCAGAAGTGGATAAGATTTCAAGTGAAGTTGCTGTGACGGATGAATCCAAACCAGAAAACGAAGCAAAAGTTGTGATGACAGAAAAACCAGAAATCGTAATTCCCGAACCGTGTATGACAGAACAAAAAGAAACAAGTGAATCTTTCCAAGTTATCGAAGTTACAAGCGAAATTGTGCCAGATCAAGTGAATCTCTCGTGTCCTAGTAGTAGTAGCAATGTTATCAATACACGAGAAGTAGAAGACTCGCTTGCCGTAATTGTTGAAGCTGTGGACTTGATACAATCAACGTCGACAGATGTCAATAAGCCCGTTCCGTCATCGTCAACTGGCGAAACGACTCGCGACGAAGAAGATGGCGGTTTACGGAGTGACGGATCCGACAGTGGTTTGGGTTCCGAGCCATCGCACAACGGTTCTGCCTTGCTGGACAAAAGTTTATCCGCCACCGCAACCACAAAACTACCGGATCCGCCTGCCAAGGGCAATCTCAAACGTCGTTCCTCCGAACAAATCGACACGTGCAGCGAAATTGGCACGAAACGCAGCAAGAAAGGCATCCAGTTCGAAGGTGTCACGGTATATTCGTTTCCGCGCCAACAGGGATTCAGTTGTGTGCCTTCGCAGGGCGGCTGTACGCTTGGCATGGCAAATCAGCATTGTGGCGTCAAGTATTACACGTTGACGGAGCATTCGGCGGAGCAGCGACGAAACCATCGACAACAGTTGGCGGAGATGAATCCACGTAGTTCGAGTAGTGACGATTCCGATAGCGAATACGAGCCAACAGATAGCAGTAGTGAAGCGGATAGTGAAGTTTATGGATTTTTGCAGCCAGTTTCGGCGCGACAACGACGAGCCTTGCTCAAATCGGCGGGCGTGCGAAAGATCGATACCACAGAAAAAGACGATTGCAAGATGATCCGGACGTCGCGCGAAGTTTGCGGGTGTACGTGTCGCGTTTATTGTGATCCCGATACATGTGCCTGTAGTCTCGCGGGAATCAAGTGCCAAGTGGATCGTCCGAATTTTCCGTGTGGATGTACAAGAGAGGGTTGTGGTAATGTCGTGGGTCGCGTGGAATTCAGTCCGATGCGTGTGCGAACGCATTACATTCACACCGTGATGCGATTGCAAATGGAGAACAAGTCGGAACGACTGCGAAGTTCTACAAATGCCGCGTCGACAGCTTCTAGCAATAATTACAAGGCatggcagcagcaacaacaacagcaacaatcAAATGTTCGACAACTTCCTTCAAGTAGCTCCAATAGCAGTGGAAACGCTTGTAGTGTTGATGGACGAGCGATAGACGAAacgcaacaacagcagcagcaacactGTGATTTTAGCCTAATTTACGATAATCATAGTAGTATTAATACGGAAATCGTTCCCTCGTCAAACGCCGCATCACCCGCATATTCATCATACCAAAGTGACACGACCTCGTCTTATGTCAACCATATCATTGAGTATGTGCCCAAACCCTCAACGTCGTACGCCACCAATGCCAATTACGATCCCAATAACGCTTACATGACTTCCTATGTCGAGCCGCAATCGCAACAGCAGCAGCCGCAGCAACAACAGTACCTAGAAGTCGTTTCTTACGACACCATGCAAACGCCCACGTATCAATTACATTCCTACGACCATCACTCGTACGCAATGCCGCCACAACAGATGAATTACGCAACTTACCATCATCATCCGTATCCCACGAGCACGGCGGCATCATCTTACATCGCATATCCCAATTCGACGAGTAACGGATACCTTCAGAGCCATATCCAACTGTGTGACCAACCCATGACGACGACTTACAACCCGAACCAAACACAAATTGTGTCGAACACGATTATTAATGCCACGCCATCGACGTCGCAACAACTCTACGAAACGTCCCCGGCAGTCGTTGTGCAACCAAATACCAATGTCCTTCCCGTTATCAATGGGAAACAACAATTTGAGCCTACAAATCCAAAtccgcagcagcaacaacaacaaatggtCGTCACCGCGAACGGCAACACGAACGAGAATTTGTgcgaaatcatcaaaaaggGGATTGTTGAGACAGTCTCCGGATGA
- Protein Sequence
- MNPVVETLVIETVVETAPIIADCDDFQCVAEEDDPLSDPLSTNDTPEKDEFPSINDEEDDESQTTDKEKDQTIRLVNVKELTDSKIEISCETKALPVKRPEPQPSCSKASEPNFEFDDLEDLIESSRIETSFNKKKFQEEPRPSTSSALTSGDETWKLQEIIDETSIASSVDSDITSNDAPLEAENAELVDDEEKKSRFDDETSVSSFLLEDFEDQITQNVVNKSNVSQSSSQIEQIESSLDEEPELTQTKDAKEQVEVTVISEDMKEKPEIETKEEEQEEKQTQPVEILPEVDKISSEVAVTDESKPENEAKVVMTEKPEIVIPEPCMTEQKETSESFQVIEVTSEIVPDQVNLSCPSSSSNVINTREVEDSLAVIVEAVDLIQSTSTDVNKPVPSSSTGETTRDEEDGGLRSDGSDSGLGSEPSHNGSALLDKSLSATATTKLPDPPAKGNLKRRSSEQIDTCSEIGTKRSKKGIQFEGVTVYSFPRQQGFSCVPSQGGCTLGMANQHCGVKYYTLTEHSAEQRRNHRQQLAEMNPRSSSSDDSDSEYEPTDSSSEADSEVYGFLQPVSARQRRALLKSAGVRKIDTTEKDDCKMIRTSREVCGCTCRVYCDPDTCACSLAGIKCQVDRPNFPCGCTREGCGNVVGRVEFSPMRVRTHYIHTVMRLQMENKSERLRSSTNAASTASSNNYKAWQQQQQQQQSNVRQLPSSSSNSSGNACSVDGRAIDETQQQQQQHCDFSLIYDNHSSINTEIVPSSNAASPAYSSYQSDTTSSYVNHIIEYVPKPSTSYATNANYDPNNAYMTSYVEPQSQQQQPQQQQYLEVVSYDTMQTPTYQLHSYDHHSYAMPPQQMNYATYHHHPYPTSTAASSYIAYPNSTSNGYLQSHIQLCDQPMTTTYNPNQTQIVSNTIINATPSTSQQLYETSPAVVVQPNTNVLPVINGKQQFEPTNPNPQQQQQQMVVTANGNTNENLCEIIKKGIVETVSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -