Cbre008939.2
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- CAMTA2_1
- Assembly
- GCA_036172545.2
- Location
- CM070086.1:33013998-33042111[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-48 8.9e-45 150.9 2.4 2 116 144 256 143 256 0.98 2 3 0.081 6.2e+02 -0.1 0.6 57 108 394 446 391 447 0.74 3 3 1.1 8.5e+03 -3.7 0.8 40 73 1510 1543 1486 1556 0.53
Sequence Information
- Coding Sequence
- atggcaaattatCGCCATCAACTCACCGCAGCGCATCAACAAGCGCGAAGCTCGTATTACGCTCAAGGTGTTCCGCCTGCTTCGCAAACTCCGATGCCGCCGCATAACTTAATGTaccaacagcagcagcagcaacaacaacaagttcaGACGCAACAACAGCAAAATTCTTACATGAATGCCGGACATCATCATCTCCAGAACCCATATGCTCATATGACAATGGGACCGGGGCAAACGGCACATCACATGCTAACGCGTCATTACATGAGTCAACATCATCAACACGCCTCTGCCGCGAGTTTAATCAACAGACATCACCATGCAATTAACATGAGCACGGCAAATGTTCCGTTAAATGCAAatggcgAACCAATTAAGCTACCTGACAACTTGGAAAGTCTCCCGAGAGCCGATCATTTTCCAACGCAGCGACATCGATGGAACACAAACGAGgaaATTGCTGCAATTCTCATCAGCTTTGACAAACATTCCGAATGGCAATCAAAAGAAGTCAAAACTCGaCCAAAAAGCGGCTCAATGTTGTTGTATTCGCGCAAAAAGGTCCGTTATCGACGCGATGGCTACTGCTGGAAGAAACGCAAGGACGGCAAAACGACGCGCGAGGATCACATGAAGTTAAAAGTACAAGGAACGGAGtgCATCTACGGCTGTTACGTACATTCAGCTATCCTTCCAACCTTTCATCGAAGGTGCTATTGGCTGTTACAGAATCCAGACATCGTCTTAGTGCATTATCTTAATGTCCCGTATCCGGATGATAATAAAATGGCCGTTATAACGCCTAATCTCGCGCTGTGGGGCGACAAGAAGGAATGGACCAAGGAGGAATTGGTTAGTCAGCTGAAGCCAATGTTCTTTCCAGTCTTCAGCGAAGACGATGCCGACACCAGCAACGACATTGAAATTTCCACGGCAGAAACTGTCGAAGCGATTGTCAGTCAATTAATGGAGAAACAACGAATGGCACGTCAAGCGGCGCTCGTGAAGCAGCTGGAATGCGGATGTCCCGATTCGACGTGTGCCGATGGCAAGAGTTGTTCGCATCCGATGCGGAGAATTACGTCAAGGACGCCCGAAAATAAGAGACAGGAGAATAATAATCAAGTTTCAAGTACAACGCCAAATATTTTGGTTGGATCGAGGCTCTACCCAAAATGGATCGAACGTCGTCAACGGGAGCAAATGCTCGAAAACGCCCGTCTCCAAAAGTACGACACGAACTCTCTGCATTTCCAAATCGTTCCAACTACATCACAAAATCACCCTTCGATGATGCGTCAAACGTACCAACATTcccagcagcagcaacagcacaTCCCTCCCCCACTTTCGAtgcagcaacagcaacaaatTCACGCTACGACGAAATTATCACATcctcagcagcagcaacaacaaccgaCGAATAACACTCGGAACGGCCTGCAAATCGTTAATCGGTCAACAAATCAAAATGCcagcaataacaataacaacaacactgACGTTAATTTGAATGGAGGTGTTGAGGAAAACACTCATCATGTGACACATACGAACACGAGCAGCATGGAAGATGACACAAGTACAACGACGACAACCACGACAACTGCATTCAATAATCGAATTACCGTCGTACAGcatcaacagcagcagcagcagcaattaaatggaaataataattcatcaaATGGTCCGAGTAATAATGGGAATGCACCACCGCTCGTCTTGAATTTGTCTcagCTTCAGACATCGCCCGGTAGCTTGCTCATACTGAACAACCAACAATCGACTTATGTGTGCCAGCCAACATCTTCTCCCTCGAATCCATCCGAGACGACGTCACAAGACGACAAAAGCACAATTGTCGAGTTTACTGTTCCAAAAGAGGAAACAATGATGGATTCCAACGAAAAATATGCCGATCAGTATGAAACGAGCATGAGTTACAGCTCGACAGCTCACAATAGTCCCATGAAAAGTCATCCGACACTGAAAGAAGGACATGAAGTACCCTATTTCACTGAAACTTTGGATTTATCGCAAGAAGACATCCAAAAAACCCTTTCGGCGAACATGCCAACTAATGGCGCTGATGTCCACGAAGACACAAACGAGATAAATCCAATGGATTTCATTGAAAGTTGCGAAACTCAAGGTCACGAAGATGACGTTTTCGTGAATTTAGATGCTTTTGATATGTTAGTTGAGTTTCCTGAACTTCATGAATTCCATGGAAACGCAAATAACGCAAATAATGAGGTTATGCATGAGAACAAATATCATCACACTGCGGGAAATGTGCCTGGCGAACAAACCTCTACAATTACGGATTACAGCCCTGAATGGGCATACCCCGAAGGAGGTGTCAAAGTTCTCGTTACAGGTCCATGGGATGTTAATACAGCATATACGGTGCTTTTTGATAACTTTCCTGTACCAACAACTTTGGTTCAAAGCGGCGTCTTGCGTTGTTATTGCCCTGCCCATGAGGTTGGCGTCGCTACGATGCAAGTTAGTAGTCAAGGATTTGTGATCTCAAACTCGGTAAATTTCGAGTACAAGTCTCCGCCAAAGACAGAAGTGAAAGTTGAAGCTGGCTCAAGTGAGGTTATGTACAAATTTAGCTTGTTAAATCGCTTGGAAACGATCGATGAGAAGCTTCAAATCAAATTGGAGCCAAATGATGGATCTTCCGACGAAGCCACGTTATTTAAACAACCAAATTTCGAAGAACGACTTGTTTCGTATTGTCAAAAGCTTACGCAGCGCACGTGGCGATCAGCTACTCCGACGCCGTGGGGTGTTTCGCACAAAGGAATGACTTTGTTACATTTGGCAGCGGCATTGGGATATTCGCGTTTGGTTTGTACGATGCTTACATGGCGATCGGATAACTCTTCAATGATCCTCGAGGCAGAAACTGACGCCTTGAGTCAAGATGAAGACGGATACACACCCCTGATGTGGGCCTGTTCGAAAGGTCATCTCGAAGTTGCCACCATTTTGTATCGATACAATCACAATGcactaaatgtcaaaaataaccAAGGCATGAGTCCGATAGATGTCGCTAAAGCAAATAACCATCAAAATATCGTCAATGAATTGGAGAAACTTGAACAGGAAAGACTCAAACCTgcagaaataaaagaaaaggaCGCGGAACAACCGATCTTtaatccatcatcatcatatcaaGATCCAACGACGCGATTGTCGCCGCAATCGGAAAACGCGGGAAAAGATCTCAGCAAGTCACCGATTTCGGATAACAGAAGTCATGATGGCGTCTTTTTACGCCCGGGAGCTGTTCTTGCATCGCAAAGCCCGCCAGGAGCGAGATTGTCAAAGAGATCTTCAATTGACAGCGGAATTAACATGGATATTCGTACTCCATTGACACGAAGCGGAAAAGGCATCAAAGATAGTCATCGTCGATATTatcttatGGATCGCAGTATGTCACTTCCGATCTCATCAAATTCTCCGCAATCCATGTCAAGTTTCGACATTGGCGACAGCTATACTGAGTCGCCGTTGAATATGACAGCGTCAAATAGTGGTTCACTTCTGTCGCCATTGCGAAAAATGGATTTCGCATTATGCGAAACAGCCGCTGATTCAAGTCCAATTGCTGAACATGAAGATTCTcaagacgatgacgacgaaacAAACAGTCAACAAAATACTGAAATTGGGAATACTCGAGTTGggGAGTCGGATGCTAAAGTTCTCACGTTAGCAGAACAAATTATCGCAGCGATGCCAGAAAGGATCAAGaaCGAATCTGAGGAAGTAATGTCTCTCGGAAGTCCCTTACCCGACAGTTTATCAACAGATGCATCCACAATCGGCATGTTAGGTGATTCGTTCATTGAGCCTCTCTTAGACAGTCAGTTCGATCAGGAGTTTAACTTTGAATTCAGCGATCACAATTAtcgttACCATGACGTTGGCACCCCCTGCTCAAGTCTCAGTCCCGCAAGTTCGGGCCCCCTTCAAAGTCCCGCAAGTTATTCCGTGCCGCCAGATCCTCCAATGTGCTCGCCAAGTCCTCCGCCAACCACGCAGGACTTTACGGAATTCCTTCAAGCCTCAAATTCGACGCCAAAACCCTTCGAAGCTGATTTTTCGAATCTCACACTCACGGATAAGGAACAACGCGAATTGTATGAAGCTGCAAAATGCATCCAGAAGGCATATCGTTCGTACAAGGGACGAAAAAAGTTGGAAGAACAAGACAAGGAACGTTCCGCTGCGGTTGTGATCCAAAATTATTACCGGCGATACAAACAATACGCTTACTATCGACAAATGACACACGCCGCACTCGTCATTCAGAACGGATATCGAAGTTATTGCGAAAATAAGCGATTTAAAAAGTCCCTGCATCAGTCACATGCTTCAACTTCGGGACAGGAACAACCGCCATCGACTTTGGGGTATTATAGGAACTATCGAAGCGACTCGCAGCATTCCAGTAGCAACTCGAAGGAGCAAAGCCCATCAGGACCGTTGAAacgaACGTATTCTCAACGCACCCAAAATCAAGCAGctcgaaaaattcaacaatttatgcgacaaactaaaaataaactgcAGAGAGAACGAGCCGAAAAAGAGAGGCTTGTGCACCAACGTCGAGTGGAGTACCTCCAAAACTCGCAGTCAGTCGCTCAACCAGATCCAGCTCAGCTGCTGTCATCGGGGCAAACGCATCAACCTCAGCATTAA
- Protein Sequence
- MANYRHQLTAAHQQARSSYYAQGVPPASQTPMPPHNLMYQQQQQQQQQVQTQQQQNSYMNAGHHHLQNPYAHMTMGPGQTAHHMLTRHYMSQHHQHASAASLINRHHHAINMSTANVPLNANGEPIKLPDNLESLPRADHFPTQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVITPNLALWGDKKEWTKEELVSQLKPMFFPVFSEDDADTSNDIEISTAETVEAIVSQLMEKQRMARQAALVKQLECGCPDSTCADGKSCSHPMRRITSRTPENKRQENNNQVSSTTPNILVGSRLYPKWIERRQREQMLENARLQKYDTNSLHFQIVPTTSQNHPSMMRQTYQHSQQQQQHIPPPLSMQQQQQIHATTKLSHPQQQQQQPTNNTRNGLQIVNRSTNQNASNNNNNNTDVNLNGGVEENTHHVTHTNTSSMEDDTSTTTTTTTTAFNNRITVVQHQQQQQQQLNGNNNSSNGPSNNGNAPPLVLNLSQLQTSPGSLLILNNQQSTYVCQPTSSPSNPSETTSQDDKSTIVEFTVPKEETMMDSNEKYADQYETSMSYSSTAHNSPMKSHPTLKEGHEVPYFTETLDLSQEDIQKTLSANMPTNGADVHEDTNEINPMDFIESCETQGHEDDVFVNLDAFDMLVEFPELHEFHGNANNANNEVMHENKYHHTAGNVPGEQTSTITDYSPEWAYPEGGVKVLVTGPWDVNTAYTVLFDNFPVPTTLVQSGVLRCYCPAHEVGVATMQVSSQGFVISNSVNFEYKSPPKTEVKVEAGSSEVMYKFSLLNRLETIDEKLQIKLEPNDGSSDEATLFKQPNFEERLVSYCQKLTQRTWRSATPTPWGVSHKGMTLLHLAAALGYSRLVCTMLTWRSDNSSMILEAETDALSQDEDGYTPLMWACSKGHLEVATILYRYNHNALNVKNNQGMSPIDVAKANNHQNIVNELEKLEQERLKPAEIKEKDAEQPIFNPSSSYQDPTTRLSPQSENAGKDLSKSPISDNRSHDGVFLRPGAVLASQSPPGARLSKRSSIDSGINMDIRTPLTRSGKGIKDSHRRYYLMDRSMSLPISSNSPQSMSSFDIGDSYTESPLNMTASNSGSLLSPLRKMDFALCETAADSSPIAEHEDSQDDDDETNSQQNTEIGNTRVGESDAKVLTLAEQIIAAMPERIKNESEEVMSLGSPLPDSLSTDASTIGMLGDSFIEPLLDSQFDQEFNFEFSDHNYRYHDVGTPCSSLSPASSGPLQSPASYSVPPDPPMCSPSPPPTTQDFTEFLQASNSTPKPFEADFSNLTLTDKEQRELYEAAKCIQKAYRSYKGRKKLEEQDKERSAAVVIQNYYRRYKQYAYYRQMTHAALVIQNGYRSYCENKRFKKSLHQSHASTSGQEQPPSTLGYYRNYRSDSQHSSSNSKEQSPSGPLKRTYSQRTQNQAARKIQQFMRQTKNKLQRERAEKERLVHQRRVEYLQNSQSVAQPDPAQLLSSGQTHQPQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -