Cbre002326.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- NCOR1
- Assembly
- GCA_036172545.2
- Location
- CM070085.1:22920261-22930888[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-06 0.0025 17.7 0.0 3 43 407 447 406 449 0.97 2 3 0.037 39 4.3 0.0 10 43 791 823 785 825 0.87 3 3 6.7 6.9e+03 -2.9 0.0 9 21 832 844 831 846 0.79
Sequence Information
- Coding Sequence
- ATGGCATCATCTGACCATGGACACAACAATTCTCAGATGTTTGTTCCGTTTGCGATTGACTCATCGAGGGGCCCGGAGTTTAGATATGTTCATCAAGGAACGTATACACCATCTTCTTACCGCGATATCCAATACATTTCACCACAGCAGgtatcTCAAATCGAAATTCATCGATCAGGACCCCTAGTATCAGTGCCAAACTCGTTGTCCGTGTCTTATAGATCGAGCACAGATACGATGTCATCAAGGCCTAGAATGTCTTTGCTTCATGGAAATGAATTTGTTCAGTATAGAACGCATCATTTACCACACTTGGCATCTACGGACAACCTATCTCAGACGGGATTGAGAATAGAGACTAGGGATTTGTCTTCATCAATTTCAAGTGGGGCTTATCATCCTATGGTTGAAGCGATATCTCCCACTGGTGAAGAGAGTAATGCTGAAGAGCTTGGTAATGCTAAAAATGAACTTATTACTCATATGAACAAACTCGATAGTGAGATAagtgaaactgaaaaaactaTATCcatgttaaagaaaaaaaaggctaTGCTCGAAGAAACCGCTTCATACAAACTTGAAAGCAGTAATGTCGAAACCAACGAGCTTCAACCCAAGCATAGAAGCTTAGCACAAAAGATATATGCAGAGAATAGAAAGAAAGCCCTGGCAGCACATGCTATTTTGAGTTCGTTAGGGGCTTCAACTGATTACCCCATGTATAATCAACCGAGAGATGCACAAATTTGCCAAACAATTATTGAGAAGCATAaatcttttaaagaaaagctCATTCAACATTTGCGTGCTAAGAAGCTTCAAAATGCTAGGGATCAACAAGAAACGGCAGAAAAGTATTCTTTGTTATCACAAGAATGGAATAAAAAGGTAGAAAAACTTGAATCTACCATAAAACGGAAGaccaaagaagcaaaaaatcgagaattttttgaaaaagttttcccCGAATTAAGAAAACAGAGGGAAGACAAAGAACGTTTTAATCGTGTTGGTTCCAGAATAAAAAGTGAAGCTGATGTAGAAGAAATAATTGATGGTCTACAGGAACAgGCTATGGAAGATAAGAAAATGAGATCTTATGCTGTTATTCCTCCTCTTATGCTCAATAGTGATAAGAAAcgttgttttttcaaaaacgaaAATGGAGCATTGGTTGATATGGAAGCAGAATTTAAGGAACGCCAAAATATCAATGTTTGGACAAATGgcgaaaaagaaacttttcgagaaaaatttttgcaacatccaaaaaattttggtgcAATAGCAGCTAGTTTAGATAGAAAAAATGCTCAagaCTGTGTACGGTATTactatttaagtaaaaaaactgaaaattacaAACAGTTGTTAAGGAAATCTAGACAAAGGACTAGAAGCTCGAAAAATCCTCAGAAATCAAATCATACCTTAACACCATCTATAATAGATGCTATGACGACTGGTGTTTTGACTCGGCTACAAAgagagcaacaacaaaaaactggAACGAGAGATAGGACTTCCTCAACTATCAGAACTGTTAATTTATGCTCTAATGTCTCTGGGTCATCTAGCATAAATGAAAACGTgaataatacaaattttgaaggtGGTTGTGAAGTGATAGATTCTGTTAATACATCAAAGGGAAGTGAAATATTTCCAATTGTGACAGATAGAGATAATGAAGGGGCATCCCCTAATTCACCTTCTCCTAAAAATGAAGTAGTGAAATCCACTGTGATAAGTTCAACCATTTCTAATAACAGCGAAAAGAACGAAAATGTTAGTGATTCTTCGGAAATAAAAACTAAGGAAAATTGGAAAACTGAAGATGTCGATACGGGATCAATTGAAGACCGAGAAgcactaaaaaaagaaattaatttatcagcaAAACTGGTTGATTATGGaAATATTAAACGTAGAAGACTGGAAACCGAAACATCAGATTCTGAAACATCAGGACTAGTAAAAGAAAATATATCGACACATCCCTGTTTTATTTGTAAAGCCGAAACTTGTCTTCGAACAAAGCCAATAGAAAAGGGATCAATTTACGGactaaatgatgatgaaattccGGAAAATGCTAGAGTTTGCCAACCATGTCAATCAAAATCGGTTAAGTCTAGGTATACTACATGTCCACTGCCAACTTGCGCTAATCCAAAAGATCGTTTAAAACACTTCCGTAACATACCTTCAAAATTGTTCGAACTACCATCGGAGTCAAAGAATGCAATTATAGAAGAATTCCAGATTGCACCGGATATCAATAAGTGTTGTTCAGTTTGCTTGATgaaaatacgaagaaaaattaattattttattcatatggTTCCATTAAATGAAGATcaagtttcaaaattgaaagcgTTTCTTAAGGAAAATGGACCTAAATGGATGCAGATTAGTGAGCAATTGTGCAAGCCAACAATTGCTATcaagtcattttttcaaattaataaaacaaaccaTGGGCTCGACAATGCTTTGAaagaatattatgaaaaacatcCTAATGAAAACAAGCATTTGGATTTGTCTGATGGCGAAGAATCAGATATGAGTGCATCATCTTCAGATGAAAGAGATATTAACAGCGATACAGCTTCTGCAGAAAGTCCGGgaaatcaaaacaataaagaaaatacaaatttgtCAACAcaagatttaatgaaaatagagAAAGATAACAGATTAATTCCACCTTTGAATCAACCtccaaaaagacaaaaaacgcAAGAAGAATATGATAGCTCTGCCACAGAAACAGCTGATGAGGAAAACGAATCATCTCCAGCTAATCGTCAGAGTCCAAAAGTTATCAATCATCCATTTTCGGCTCTACCTAATGGCCCAAGGATTGAGTTCATCATAGGAAATGTTATAGAAAAGGCAATCAAAGATCAGTCTATTGGACTGCCTCCTCCTGCACCAGAGAGCAAGTCTGAAATAACATTTGTAAAAGAATTTAGAAATGATACACCACGATCTCGAAATCAGAAGTGCGACAATATGCCGACCATATCCATActGAGTCCAAAATCGACACACAATCAGCAACATTTGAATATCAAAGGTTCAATAACACACGGAACGCCAGTCAGCTCTAGCGCTGTAATGATTTCATCAGTAAGCTCACCAAGCTCTCGATATGATAGTATTTTTCGTCAAACGCCTCCCGGAGAAAAGTCTGGTTCAATTACACAAGGAACACCAGTTCCAATGGGTCACTCGCAATTTTCCGATAAAAGATTATATGATTATTACAAGAATAATCGTCAAAGTCCTGCTTCAAACATTTCATCACAATCAGGAAGTCCGCAATCAGGAAACTTTGGCAACTTATATAATCGTTCTACCACATATATTGATCATCCACAATTGAGTTCAAAACAAATTCTGCTAAATGATTACATAACTTCACAACAAATGATTGGTCGTGGAAGTAGATCTGATAAAGAAGTTTCTAGAGGATGCCATAGTATTTCTACATCCCCAGCTACTATCTTTTATAGTGAAAAAGACAGAAATCGTCCAGACTATATGAAAACTCCTCCAACGGATCGAAATAgTGTATTGAGCCCTCATCGTACGTCACCAACTCAAAGGCAGGAGACTACGGAGAATATGCGAAGAAGTCACCCAATTAAagTAATCCAGCGTCACAATACATCAATGGCCAAACCTCCTAGTCCAGTTTCATCTCGAATGCATTATCCTCAATCTTCTTTTCCTCCTGGACATGAAGCCTTTTCTTCATTAGTAGATGTTGCCTCAAAGCAACCTTATGTACCTACTAAGGATGACAAACGAACGAATGTTCctttgatttccattgatcaACCAGGAGAGGATTTGCGTTATCAAATGGTTATTCAAACAGCCATGCAAAGACATCATATGCAACAGcAAATTCAAATGCAACAGCAAAGTACTCAACAGCAGCAACATCATCAGCAAAGAATTcatcagcaacaaaaaaacaagtaTTTTCCTGATATTGAAAAAGACAGACGCGAAGATGAGAATGCTCGAGAAAGAGAACGCGTTCAACAGCACATAGAGAGAGAAAAGGACCGTGAAAGAATGCACTTGGTTGATATGGAACGCAATATGTTAATAGAAAAAGAATATGAAAGACAGCGCTTGAAGGCTGAAGAAAATGAACGCATTAAATATGTCAGACCAAATGACACTGagagacCTTTCAGGCCACAAATCTCAAGCAGAGGTGATACAACTTTTACTGCAGCAAACCTGATAAATGCTATCGTAACCCATCAAATCAGTCAAAATATGAGTAATGTAGATCAACCATTGTCTAGAGACACTAATCGTAATTCCCAGATACCTGCTGGACGAGGTACATCCCCAATTGATAATAATGGGAAAAGAGGCTCTCCCAACGTTATAAACATTGACGTTGATCCTAGCAATACACAGCACATTAGCAACCAAGTAACTAAAATCAAACTTGGTGATTTGGCGGAGTCAATAATCACAAAAGATTACAGTCCATCTCCACTTCATCCAATTCGTCCAAACTTTTCACAGGAATTCCAACCAGGTCTTTTTTCTGAACAGTGGAAACAGAGCAAACGTGTAAGTATTCAAAAAGATGAAGTGCAACATCCTAATGCAGACGAAATGGGTAATTTATCGGAAGAAAGACAAATTGTCAAAATGTCTCAAACACCAAGTCCAAGACAAAGACATAATTTTCATGAGCCAGTATCACCACCTGATTCGCAAACATATGCAGTTGACAAAAGAGTTCCTATGCATCCTCCCTCATCACAAGAATTTGCCTTAGATTGTTATGTAAAATCTCGCATCGCTGAAGCAATGAGAACTGAAGGAGACAAAAGAATGGATGATCgtaatcaaaaaatacataCACAAGATCCAGAGTCACAAAACATAGTTTCTGGAACACATTCTGGAAAAACTGAACATTCTTCCAATGTACCTTTGACATCATATGCACCCACAGCGTATGCATACCCATATAGCGCTTTAAATATATCAGGAGGTAACACTTTATTATCACCCAAACAAGATGCAGTGCAAGAGCAGGATGcacttcaatcaaaaaatctcacaagTGGTCCGTTAACTTCTCACACTTCGCAAGTAACAGAACCCAAGCCACTTTTATCAGCACAATACGAAGCTTTGAGCGATGAAGATTAA
- Protein Sequence
- MASSDHGHNNSQMFVPFAIDSSRGPEFRYVHQGTYTPSSYRDIQYISPQQVSQIEIHRSGPLVSVPNSLSVSYRSSTDTMSSRPRMSLLHGNEFVQYRTHHLPHLASTDNLSQTGLRIETRDLSSSISSGAYHPMVEAISPTGEESNAEELGNAKNELITHMNKLDSEISETEKTISMLKKKKAMLEETASYKLESSNVETNELQPKHRSLAQKIYAENRKKALAAHAILSSLGASTDYPMYNQPRDAQICQTIIEKHKSFKEKLIQHLRAKKLQNARDQQETAEKYSLLSQEWNKKVEKLESTIKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGSRIKSEADVEEIIDGLQEQAMEDKKMRSYAVIPPLMLNSDKKRCFFKNENGALVDMEAEFKERQNINVWTNGEKETFREKFLQHPKNFGAIAASLDRKNAQDCVRYYYLSKKTENYKQLLRKSRQRTRSSKNPQKSNHTLTPSIIDAMTTGVLTRLQREQQQKTGTRDRTSSTIRTVNLCSNVSGSSSINENVNNTNFEGGCEVIDSVNTSKGSEIFPIVTDRDNEGASPNSPSPKNEVVKSTVISSTISNNSEKNENVSDSSEIKTKENWKTEDVDTGSIEDREALKKEINLSAKLVDYGNIKRRRLETETSDSETSGLVKENISTHPCFICKAETCLRTKPIEKGSIYGLNDDEIPENARVCQPCQSKSVKSRYTTCPLPTCANPKDRLKHFRNIPSKLFELPSESKNAIIEEFQIAPDINKCCSVCLMKIRRKINYFIHMVPLNEDQVSKLKAFLKENGPKWMQISEQLCKPTIAIKSFFQINKTNHGLDNALKEYYEKHPNENKHLDLSDGEESDMSASSSDERDINSDTASAESPGNQNNKENTNLSTQDLMKIEKDNRLIPPLNQPPKRQKTQEEYDSSATETADEENESSPANRQSPKVINHPFSALPNGPRIEFIIGNVIEKAIKDQSIGLPPPAPESKSEITFVKEFRNDTPRSRNQKCDNMPTISILSPKSTHNQQHLNIKGSITHGTPVSSSAVMISSVSSPSSRYDSIFRQTPPGEKSGSITQGTPVPMGHSQFSDKRLYDYYKNNRQSPASNISSQSGSPQSGNFGNLYNRSTTYIDHPQLSSKQILLNDYITSQQMIGRGSRSDKEVSRGCHSISTSPATIFYSEKDRNRPDYMKTPPTDRNSVLSPHRTSPTQRQETTENMRRSHPIKVIQRHNTSMAKPPSPVSSRMHYPQSSFPPGHEAFSSLVDVASKQPYVPTKDDKRTNVPLISIDQPGEDLRYQMVIQTAMQRHHMQQQIQMQQQSTQQQQHHQQRIHQQQKNKYFPDIEKDRREDENARERERVQQHIEREKDRERMHLVDMERNMLIEKEYERQRLKAEENERIKYVRPNDTERPFRPQISSRGDTTFTAANLINAIVTHQISQNMSNVDQPLSRDTNRNSQIPAGRGTSPIDNNGKRGSPNVINIDVDPSNTQHISNQVTKIKLGDLAESIITKDYSPSPLHPIRPNFSQEFQPGLFSEQWKQSKRVSIQKDEVQHPNADEMGNLSEERQIVKMSQTPSPRQRHNFHEPVSPPDSQTYAVDKRVPMHPPSSQEFALDCYVKSRIAEAMRTEGDKRMDDRNQKIHTQDPESQNIVSGTHSGKTEHSSNVPLTSYAPTAYAYPYSALNISGGNTLLSPKQDAVQEQDALQSKNLTSGPLTSHTSQVTEPKPLLSAQYEALSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -