Cbre006650.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- RCOR3
- Assembly
- GCA_036172545.2
- Location
- CM070086.1:16008184-16009692[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-10 1.9e-07 30.9 0.0 2 46 150 194 149 194 0.97 2 3 2.2 2.3e+03 -1.4 0.1 36 43 349 356 347 360 0.80 3 3 1.9e-12 1.9e-09 37.2 0.0 2 46 390 434 389 434 0.97
Sequence Information
- Coding Sequence
- ATGAGTCGAAATACCGCGGAAAGTGTACAAGCGAAATCGGGCTCCGGCAGCGGCAGCAACAAAAACATCCAGAGCAGCGAAGTATCATCCTCCAACAAAAATGGCTCATCTCGTCCAAAGGAAAGAAATTCCGCGGCAACTGCAAATATTGTCGTCGAAGACAGCTCGGACGACGATAATGCCGAGAAAATTCGCGTGGGCAAACAATATCAAGCCACATGCCCCGAAATGCAAACCACAAAACCGACCGATGGGAATTCCGACGACAAGGCGTTGCTTGTTTGGACTCCCACAACAGCGATAGACGAACAACAAATTGACGACTACGTGAGAACGGCACAAGAAAAGTACGGATATAATATGGAACAGGCACTGGGGATGCTGTATTGGCACAGTTACGACTTGAAAAGTGCCATGGATGACTTGTGCAACTTCATGCCGTACCCCAACGAGTGGTCACAAGAAGACGAAGTGTTGTTCGAGCAAGCGTTCCAGTTCCACGGGAAGAGTTTTAATCGCATTCGACAAATGTTGCCGGACAAAAGTGTCGGCAGCTTGGTGAAATATTACTATTCGTGGAAGAAATCTCGCACAAAAACCAGCGTCATGGATCGTCAGGAGCAGTTACAGGCGAAAAATGGCGTTTCGGACAACAACAGCGAACGTGATAGTAATTCCGACGTGGATGACAAGAACGGCATCAAAGTTGAAGGAGATGCAACGAAAACAGCAACAGATCCCATTAACTCGTCCGCGATCAACAATTGCAGCGGATGCGGCGTCGCCTGTACCGAAGTTCATAACACGGTGCATGGCAAACTTTGTTCCAgttgtcatcatcattttaaGCGAACCGGCATTTTGCGTCCCATTTCGGCGCCGAAACACTTTGGAAAGCGATCTCAAACGAGCGACAACGGGAAATACAAGAAACATCCACCGAAAGGCATTTATTTCAATCACGACGACATCGTTGCCCTTGCACAAGCTAAACAAAATCCCGGCACGCGGAACAAACAAAGCGACATTGTCGTCGGGATGGAACGCGAATGCGCCTCACATTGGACCCGCATTCAAAGTAACAAGCAAAAGCTGAGTCGAACACGGCAAAAAGTCGCAGCAGCGTTGAAGGAATGTCTCAAACCCGATTCGAATAATCGCGTGAGTGTTCGTTGGACCAACGACGAATATTTGCTGGCAGTGCAGGGCGTCAAAAATCACGGAAAGGATTTCGCGACAATCGCTAATATTTTGGGAACCAAGACGGAGGCTCAGATCAAgacatttttcgtaaattatcGTCGGCGATACAATTTGGATAAACTCGTAAGGGAATATGATGCGAAAAATGGCAAAGCGGCAAAGGATTCGAGTTCGACGAAGGGAGCAGGAAAGGAAAATGCGACGCAAGCAGAAACGTCAATGTCTGTGGAAATTGATCTGGATGAGGAAAATACAAACACAAATGCGAATGATGAGGATGTCACGATGACTCCCGTAGCGCAGTAA
- Protein Sequence
- MSRNTAESVQAKSGSGSGSNKNIQSSEVSSSNKNGSSRPKERNSAATANIVVEDSSDDDNAEKIRVGKQYQATCPEMQTTKPTDGNSDDKALLVWTPTTAIDEQQIDDYVRTAQEKYGYNMEQALGMLYWHSYDLKSAMDDLCNFMPYPNEWSQEDEVLFEQAFQFHGKSFNRIRQMLPDKSVGSLVKYYYSWKKSRTKTSVMDRQEQLQAKNGVSDNNSERDSNSDVDDKNGIKVEGDATKTATDPINSSAINNCSGCGVACTEVHNTVHGKLCSSCHHHFKRTGILRPISAPKHFGKRSQTSDNGKYKKHPPKGIYFNHDDIVALAQAKQNPGTRNKQSDIVVGMERECASHWTRIQSNKQKLSRTRQKVAAALKECLKPDSNNRVSVRWTNDEYLLAVQGVKNHGKDFATIANILGTKTEAQIKTFFVNYRRRYNLDKLVREYDAKNGKAAKDSSSTKGAGKENATQAETSMSVEIDLDEENTNTNANDEDVTMTPVAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -