Cbre011301.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_036172545.2
- Location
- CM070087.1:13275760-13291926[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-16 5.4e-13 48.2 0.0 1 41 365 406 365 410 0.94 2 2 9.2e-19 1.4e-15 56.5 0.0 1 43 792 835 792 837 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGAAATGGAAACAATATCAAGACATTATACAACGTTCCAATTTAAACATAGATGCAACCAATTTAACGCAAAAAACGACGTCGTCACCAGTAGTAAACAACGGACATCATCACACAAACAATCAAGACGAAGATAATTTACTATTGAAAAAGCTTGAAATTAACAACGGTGAACCACTGAACAATCACATTAAAAGCGAAAAACTCactgaaaataataatcaagaaaaggaaaataatttaagcgcGGAGGAAAGTGATACAAAGAAAGAAGCGACTGACAcagAAATAGAAAAGTCTGAGGaatcaataataaagaaagaagACGATACAAAGCCAAGTGACACCGCACCAAAAGACATCAAAGAGGAAAGCTCCTTGCCACTCGATTGGAAACCACAAGAAAAGTGTTATTTTTGCGTAGACGGAAAACTATTAACCGTGAACGAAGCAGGCGAATTGGTGGCTGAGTCAGGCCCGGTTCAAACAACCGAGTCTGATCTCACCAATAACAggacgcACGATTCTGACAGCGACTCGAGCGATTCGGAACAGGATCACTCACGGAAGCAACTTGAACAGGCAAATAAACAACTTACCGCAGCATTCCTGAGACAAGCGCAGGGATTAGCGGCAGCATCTGGCTCGAATATGACGTCTTTTGAATCGATGGCGGCGCAACTTGCCGCTGTTGCGTCACTGCATGGCATGCAACCGGGCTTGGCACCTTTTTATCCAggTCTTTGGTTCAACTTGCAACAACAAgcacaacagcagcagcaacagcaacaagATTCACCTCAAAGTCAAAATTCCCGTAGTAATGCGACAACAACGCAAACATCACAACAATCACCATCACTCACGGAACCAAATGCATCGAGTAGTCCCGTTGTCAAATCCGAGCCGCCAGACTTGATTGCAGTCGGGAGCGGAAATGGCGGAGGCCCAAGCGGCAATGGCGAACAACCCTTGGACCTCAGCAAGCCATCGGGCTCATCCTCCTCCTCCTTGGGACGTGAATCAATCATGTCCATGAAAGCAAAGCCACGCACTGTCACAATTCCGGGACGCCGTTCGTACACAGAGGAGGAACTCCAAAGTGCATTGCGTGACATTCTTAGTGGCAAATTGGGCACACGACGTGCCGCTGTGATCTATGGCATTCCCCGTTCAACGTTGCGGAACAAAGTGTACAAATTCACGATGGAAAATCGACAGCAACTCCCAAGGCCCGAAGTTGTCTTGCCCCAACTGTTaggcgacgatgacgacgacaaagACGAAGATGGCGACGACGACTTGGATCCTCCGGTAATTCGAACGCCATCCGCTTCAGGGGGACTTTCCGAGGAAATTCTCCGACTTTCGGCAAATCCGGCATTAGCTTTGCAACGCTTGTTCATGGAAAAATCGGGCGACGCGTCGCAAGCAACACAATTGCAGCCTCAAGgacaaaaatcacaaacgCCACAACCTCCTGAGCCACCAAAAATTCCGACACCTCAAACGCCGCCAGTGATGCCCTCGTTACTCGATCCGAGTCTCATGTTGCAACTGCAGGGACTCTTGTTGGCTGGCGGAGGTATTGGAGGATTACTTTCGTCAAAACCTGAAGAAATTGCCGCCATACAGAAACTAATTTTGTCACAACAGGAATTATTCAAGGAACAATTGAAGCAAATTCAGCAACAGCCACAGCAGCAAAAGCCCGAACCCCCGAGTTTGAGTAACGGACAAGATTTGAGTCTCTTGCAGAACATGGCATTTATtcagcaacagcaacaacaactgcTCCAAAGCCAATTGCGTAAATCCAGTGGAACGCCGCCATCCGGTAGCGAAATGAACGATAACGACATGCTGTTGCGCATTCCGTCCTACAAGTCTGTCGTTGCCGGTAGCAGTTCAAAGAATGGCGAAGCATCGACACCGCCCGCATTGAGACCCGTCGTACCCGGAAGTCCTCATAATCATCACATGCCAGTTACTTCGCCGCCCATCGGCGGGGTAGGACAACGTGTTCGCATGAAAAGCGAAAGTCAATCGCCTCCTACGCTGTTAGGCGGGCATCATAAGGGCATGCTATCCATAAGTGAGGTTATCGCGAAAagtattaacaaaaatttccaacaaatGGATCAACATCCAAAAATGCATCAATTGCATCATCATCACCCGGGAGCTCTGGGACTTGACTTGATGGATCCTCGCATGGATCAGTATAAGCGCCCGAGCATTTCggtgatcaaaaatttgggATCTGTCGAGAGATTTGGACAAAGCAGTAGTTTGTCGCCGGGCAGTAATACAGGAACGGGCGGCAAAGGAACGAGACCAAAGCGTGGCAAATATCGTAACTACGATCGTGATAGTTTAGTGGAAGCTGTGAAAGCAGTGCAACGTGGCGAAATGTCAGTTCATCGGGCAGGCAGTTATTATGGCGTGCCGCATTCGACGCTCGAGTACAAAGTCAAGGAACGTCATTTGATGCGCCCCCGTAAACGCGAACCAAAGCCACAGCCGCTAGATGGCACAAGCACGACATCCGCTTCGTCGTCATCCAAACAATCGCAAGATCTCTCTGTGATGCGTGCCCAATTGGAAAGCAAAAAACCCTCGTTACTCGGAAAAACGCCTCCGTTTCCCGCGACATCGCCAAACGGCCTCAAAATGAATCACCCCGGATCGATGTTTGATTCCGCGATGGCGAGTCAACTTCAGTATTCGGCTCCGTTCATGTGGCCCCATCACGCGGGTTTCCCGGGCGGCGCTGCATCCCAATCAGGTCAACAAAGCGCCGGATCTGCTCCTACATTCCCACCGAATGCCGAACACTTATTCGCTCAACACATGATGCAACGGTTCCAGCAGCAGGAAGATAACGCCGCGAGTAACCGAAATGGCGGCGGCTCAAACAGCAGCGGCTCAAAAACTCCCAACAACGGGAGTACAAGTGGCGCAAGTACCCCAGCTTCGGGCAAATCGGCACGAGAACTCGCCGAAAGTATCTACGACGCCAACACAAACGGGTCCTTCCTCGATGGCATTATTCGACACAGTCTCGATAAGAAGCCCGCGGAAATGAATCACGGCGCGTTATTTGATCAACTTGTCAAAAATAGCAATCGCGATGATCATGGTTCGACATTGAATGCTGCGATGGTTGCCGCTACAGCGCTTTTGGGCGGAGGACCGCAATCCGCAACGGCAATGGGCAGAAAACGATCCGGAAGTCCGCTGAGTTTTGCTCAAACGGAAATTAAGCGGGAACGAGCTAGTAGTCCAAATTCCGCGGCATCCGATGACAGCGATAGACCGAGTTCGCGCGAAGCTACGGACTTTACGAAAGACACTGTCGAACAGCTGATCAAGCTGAGACAAGGAATGACGTTGCATGGCGCGAAAGATGACATGAATGGCGGGGGCAATGGTGGCGCCATCTCGAATGATGATGACAACATGCAAAATTCCGATGACATTTCATAG
- Protein Sequence
- MGRRKWKQYQDIIQRSNLNIDATNLTQKTTSSPVVNNGHHHTNNQDEDNLLLKKLEINNGEPLNNHIKSEKLTENNNQEKENNLSAEESDTKKEATDTEIEKSEESIIKKEDDTKPSDTAPKDIKEESSLPLDWKPQEKCYFCVDGKLLTVNEAGELVAESGPVQTTESDLTNNRTHDSDSDSSDSEQDHSRKQLEQANKQLTAAFLRQAQGLAAASGSNMTSFESMAAQLAAVASLHGMQPGLAPFYPGLWFNLQQQAQQQQQQQQDSPQSQNSRSNATTTQTSQQSPSLTEPNASSSPVVKSEPPDLIAVGSGNGGGPSGNGEQPLDLSKPSGSSSSSLGRESIMSMKAKPRTVTIPGRRSYTEEELQSALRDILSGKLGTRRAAVIYGIPRSTLRNKVYKFTMENRQQLPRPEVVLPQLLGDDDDDKDEDGDDDLDPPVIRTPSASGGLSEEILRLSANPALALQRLFMEKSGDASQATQLQPQGQKSQTPQPPEPPKIPTPQTPPVMPSLLDPSLMLQLQGLLLAGGGIGGLLSSKPEEIAAIQKLILSQQELFKEQLKQIQQQPQQQKPEPPSLSNGQDLSLLQNMAFIQQQQQQLLQSQLRKSSGTPPSGSEMNDNDMLLRIPSYKSVVAGSSSKNGEASTPPALRPVVPGSPHNHHMPVTSPPIGGVGQRVRMKSESQSPPTLLGGHHKGMLSISEVIAKSINKNFQQMDQHPKMHQLHHHHPGALGLDLMDPRMDQYKRPSISVIKNLGSVERFGQSSSLSPGSNTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGTSTTSASSSSKQSQDLSVMRAQLESKKPSLLGKTPPFPATSPNGLKMNHPGSMFDSAMASQLQYSAPFMWPHHAGFPGGAASQSGQQSAGSAPTFPPNAEHLFAQHMMQRFQQQEDNAASNRNGGGSNSSGSKTPNNGSTSGASTPASGKSARELAESIYDANTNGSFLDGIIRHSLDKKPAEMNHGALFDQLVKNSNRDDHGSTLNAAMVAATALLGGGPQSATAMGRKRSGSPLSFAQTEIKRERASSPNSAASDDSDRPSSREATDFTKDTVEQLIKLRQGMTLHGAKDDMNGGGNGGAISNDDDNMQNSDDIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -