Basic Information

Insect: Culicoides brevitarsis
Gene Symbol: ct
Assembly: GCA_036172545.2
Location: CM070085.1:24269442-24283486[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.7e-27 2.9e-23 81.4 0.0 3 69 392 459 390 464 0.95

2 3 3.6e-32 1.9e-28 98.1 0.0 3 77 782 857 780 859 0.96

3 3 8.7e-31 4.5e-27 93.7 0.1 3 76 998 1072 996 1075 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.7e-27	2.9e-23	81.4	0.0	3	69	392	459	390	464	0.95
2	3	3.6e-32	1.9e-28	98.1	0.0	3	77	782	857	780	859	0.96
3	3	8.7e-31	4.5e-27	93.7	0.1	3	76	998	1072	996	1075	0.96

Sequence Information

Coding Sequence: atgcagAGAAAACATCAACGTATCTTTGCATATATAAATAAGGGACGCGACAAGCTTATCAAAACTTTAGCGGAAGAAATATCTCGACTGAAAACCATCATAGCAACGATACAAGAAACTCACAATGCTCAAATGCAACGTCTTGAAGAAAGACTTGAAGCCAAAAGACAACACATTACACGCTTAGAATCTAAAATAGATAAAACACATGATTATGATGAATTACTGAAGAAAGAAAATAGtattttaagATCAGTTGATTTGTCTACACCATCAAGTGAACAACAATCAAAATTCCAAGAACTACTATTAGAACGTACAAAAGCACTCGCAGCAGCAGCGCATCagcaaactgagaaaaataaCTCAATTGATGGAATACCTACATCACGCACCACGCCATTTGTCCGAACTAGTAGTAGTAGTGGTACAAACTCGAACAGTAGTACATCGCCGACTACTACATCTATCTTAAATCGTCCATCTTCAACTCCTAGCAATAAtagcaataatttaaataatataagtaATAATATTGATACAAGTACTagtagcaataataataagaataattCATTCCTTCCGCCGCCTTTACAAACTGTAGAAACCTTCGGATCAATATTGGGCGAGGAAATTGTCAGTAGTTGGAGGCGTAATTTGGATTTACCACCACCACCCATATCAGCGTTGGCAGCAGCCGTCGCTCAAAGAACGCCACCAACCGCGGGCTCTATATCAGTTGTCAATAAAGCATTATTAATGAATCACCATAACCCTAATAATTCATCCACAGATCCAAAGGAATTGCATCATCTAGACGAGAAGGCTAGTAGTCATCACGACGCACATTCATCGAATGCCAGTACTCCCGTCCTTCAAGACGTCCGCtcagaggaaaattttaacggCCGCAGTGCTCATACACCCCTTTCAATGTCCAAGAGCCCCACAGAAGACAACAATAATACCTTGGGCTCTCTTTCACATCACGCTACAAACTTCCCTCTATCATTCCCCTTTCAAGAACGCGGTCCAATGCGTTTTGCCGAAGATTTGCATCTACCGCCAGGTGCCATGGTTGGTCGTCTCGGTGATTCTCTTATCCCGAAAGGCGATCCAATGGAGGCGCGTCTTCAGGAAATGCTTCGATACAATATGGACAAATATGCCAATCAAAATCTAGATACACTTCATATCTCAAGACGTGTCCGTGAATTGTTATCCGTTCACAATATTGGTCAACGgctttttgcaaaatatgtTTTGGGACTATCTCAAGGAACCGTATCAGAATTATTATCTAAACCAAAGCCATGGGATAAACTGACTGAAAAAGGTCGAGATAGCTACAGAAAAATGCACGCCTGGGCATGTGATGAAGCAgcaatttttcttctgaagTCACTCATTccaaaaaaagATAAAGAGCCCGGTATGCCACAATTCGGTCGGTCAGAAAATGAGATGAATGACGAGCGCCTTCAACATATACTTACTGAAGCATCGAGTATGATCAACAACAAGGTTGGTGGTCCCCAACAGAGTAATCATCACTTGGATGATTCACGTAGCATGGACGATTCAAAATCACCAGATAACTGCTTATCACCATATTCAAAAGAGAAACGGAATTCTTTCAGTGAAGCAATGAATCAAGAAAAGTTAGCAAGAATTTATCAAGAGGAGTTAGGAAAATTCATAGGACGTCCACCAAGTGGAGGAGGCTTTCCcagTCttctttttccacattttcttAGTGGTGGCATACCACCCATGCCCGATGATAATATTCGCATGGCTCTCGAGGCGTACCATCAACAACTTGCCAAATTACAACAAGCTAATGTTGCTGCAGGAAACATACCAAACTTCCCAAATCTTCCAAGTCTTTTAGCATTACAACAACATGCATTGAATGGTGTTCAAGATTTGACTTTAcccaaagaaaaacaaatgaagTTGAATGGTCAACATCTGCAAGAAGCCCAAGAGCAGCAACGGGTTGTTGCTGATCAACACGACGCTGAAAATAATCGTGAAGTCGAAGAAACGATGAACAAGCAACCATCTTTCAACTTAGTGAAGCCCAAGTCAGAACCAGGGACAACTCCAACTAATACAACAACATCTTCCGCTGCTCCCAGTCCACTGAGCAATTCCATTTTACAGCCAGTTGGAACTCCAAGCGACGAATTTTCAGTATCAGCTAGTCCTTTACAACGTATGGCTTCGATCACAAACTCTTTGATTACACAACCTCCAACTACCCCTCATCACTCATCCGTTCAGCGTCCTTTAAAAGCCGTTCTTCCTCCAATTACTCAACAACAATTCGATCTGTACAACAACCTTAATACAGAAGATATTGTTCGCCGTGTAAAGGAAGCCCTTTCTCAATATTCTATCAGTCAACGCTTGTTCGGTGAGTCGGTACTTGGTTTGTCCCAAGGCTCAGTAAGTGATTTACTTGCTCGTCCTAAGCCATGGCATATGCTTACTCAAAAAGGACGTGAGCCATTCATTcgcatgaaaatgtttttagaagACGACAATGCTGTACATAAATTGGTTGCAAGTCAATATAAAATCGCACCGGAAAAATTAATGCGTACAGGAAGCTATAGTGGCTCTCCACAAATTCCAGCAGCAATAAGCAACAAGATGCCTCCAATGCCGAAATCCATCTGTGAACAAATGTCCAAATTGCAAGATCAACAGCAAGCTATTTTACAAATGCAAATGGCTCAATTACCTCACATTCCAACATCCCGAGAGCAACAAGCAAGTGCAGGGCCACCTCCACCCCCACAGCCGAATATGCTTTTAACTCCACCAGGCATGCCAGCGCACCACAtgataaatttgcaaaatcatGCAGAGAAAAAACCAATGCCAATTTCAATGCATTCACCACAACAAGCTTCACAAAATGTCATGCGAAATATGAATCAGCATATATCACCCACTGTTTATGAAATGGCAGCTCTTACACAAGACTTGGACACCCAAACCATCACAACGAAAATCAAGGAAGCTCTACTTGCTAATAATATCGGTCAAAAGATTTTCGGTGAAGCTGTTTTAGGACTCTCGCAAGGTTCTGTCTCTGAATTACTTTCTAAACCAAAACCGTGGCACATGCTGAGTATCAAAGGGCGTGAGCCTTTTATACGGATGCAGTTATGGTTAACGGATGCGAATAATATTGAACGTTTGCAAGTTTTAAAGAACGAACGTCGTGAAGCCAGTAAACGTCGTCGTTCTACTGGTCCTGGACAGCAAGACAACAGTTCAGATACAAGTAGTAATGACACCTCCGAGTTTTATCACTCTAATTCCCCTGGTCCTGGATCTGTAGGCTCTAATAGTGCACCACCAAATAAGAAACAACGAGTCTTATTCTCAGAGGAGCAAAAAGAAGCATTACGACTAGCATTTGCACTCGATCCATATCCTAATGTACAAACAATAGAGTTTCTTGCGAACGAACTCAATCTATCGACACGAACAATTACCAATTGGTTCCACAATCATCGCATGCGCCTAAAACAGCAAGTCCCTCATGGTGCTCCTGCTGAACCACTTCCATCACGGGAAAACAACACAAATGCTCCATTCGATCCTGTTCAATTCCGCATCTTACTCAACCAACGGCTGATGGAAATTCAAAAAGAGCGAATGGGTCTTAGTGGTGTCACTTTACCATATCCTCCTTATTTTGCTGCAAATCCTAATCTCGCTGCACTTATCTCTCGAGGACTTTTGCCAGCAAACGAAGCTGAGCTTGCAGCACTAAAAAATGCTGTAAGCGAGCAAATTAGCGGCTTAGATTTGTCTATGCCACAGTTGAAACGTGAAGGTGATGATGATTACGATGAAATGGAAGATAATGACGACAGTCACAATAATTCTGATAATGAATCTATCGAAGGTGACAAGATAGGAGACCAAAAAGATGCAACTCCGCCATCTAGTAATATACAATCTGGACGATCACGCAGAAAACCTGCAGCACCACAATGGGTTAACCCTGACTGGCAAGATAATGATAAAAAGAAACCATCTGGAAAAGAAGTTATCATCAATGGAGTTTGtgttatgcaaaaaaatgattttggcCGACCGGATAATGAGACATTACGAATTGAACCGACAGCTGCTCGAGAAGAAGATAGTGGAGATGAAAATAGATCAGACGATGAGCAATTGAGCACAAAAGCTGATCGTGCTTCTAAGGATGGAGATGAAGAAACAATGGACGAAGAAGAGAACAAAAACGGTGATAAAAGTAGTGACGAATCAAAAGACATTGGGGTTAAAGTAAAGCAAGAAGAACAATGGGAACACTAA
Protein Sequence: MQRKHQRIFAYINKGRDKLIKTLAEEISRLKTIIATIQETHNAQMQRLEERLEAKRQHITRLESKIDKTHDYDELLKKENSILRSVDLSTPSSEQQSKFQELLLERTKALAAAAHQQTEKNNSIDGIPTSRTTPFVRTSSSSGTNSNSSTSPTTTSILNRPSSTPSNNSNNLNNISNNIDTSTSSNNNKNNSFLPPPLQTVETFGSILGEEIVSSWRRNLDLPPPPISALAAAVAQRTPPTAGSISVVNKALLMNHHNPNNSSTDPKELHHLDEKASSHHDAHSSNASTPVLQDVRSEENFNGRSAHTPLSMSKSPTEDNNNTLGSLSHHATNFPLSFPFQERGPMRFAEDLHLPPGAMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIFLLKSLIPKKDKEPGMPQFGRSENEMNDERLQHILTEASSMINNKVGGPQQSNHHLDDSRSMDDSKSPDNCLSPYSKEKRNSFSEAMNQEKLARIYQEELGKFIGRPPSGGGFPSLLFPHFLSGGIPPMPDDNIRMALEAYHQQLAKLQQANVAAGNIPNFPNLPSLLALQQHALNGVQDLTLPKEKQMKLNGQHLQEAQEQQRVVADQHDAENNREVEETMNKQPSFNLVKPKSEPGTTPTNTTTSSAAPSPLSNSILQPVGTPSDEFSVSASPLQRMASITNSLITQPPTTPHHSSVQRPLKAVLPPITQQQFDLYNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPAAISNKMPPMPKSICEQMSKLQDQQQAILQMQMAQLPHIPTSREQQASAGPPPPPQPNMLLTPPGMPAHHMINLQNHAEKKPMPISMHSPQQASQNVMRNMNQHISPTVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLTDANNIERLQVLKNERREASKRRRSTGPGQQDNSSDTSSNDTSEFYHSNSPGPGSVGSNSAPPNKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLANELNLSTRTITNWFHNHRMRLKQQVPHGAPAEPLPSRENNTNAPFDPVQFRILLNQRLMEIQKERMGLSGVTLPYPPYFAANPNLAALISRGLLPANEAELAALKNAVSEQISGLDLSMPQLKREGDDDYDEMEDNDDSHNNSDNESIEGDKIGDQKDATPPSSNIQSGRSRRKPAAPQWVNPDWQDNDKKKPSGKEVIINGVCVMQKNDFGRPDNETLRIEPTAAREEDSGDENRSDDEQLSTKADRASKDGDEETMDEEENKNGDKSSDESKDIGVKVKQEEQWEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00402656;
90% Identity: iTF_00402656;
80% Identity: iTF_00402656;