Cbre001522.2
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- kn
- Assembly
- GCA_036172545.2
- Location
- CM070085.1:15920393-15924913[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-118 2.7e-114 382.4 0.0 205 385 1 208 1 211 0.99 2 2 7.5e-08 0.00039 18.6 15.0 426 503 215 294 208 343 0.68
Sequence Information
- Coding Sequence
- ATGAGACGATTCCAAGTAGTGATAGCGACACAAGTCACCGTTGAGGGACCCCTTCTCGCCATCTCGGACAACATGTTTGTGCATAACAACTCGAAGCACGGACGTCGCGCGAAACGCATGGATCCCGAAGGTACTGGCAATAGTCCATTGGGTATTTCCGGGCATCCTTTGGCACCAGACAGTACGTACGACGGCATTTATCCACCATTACCTATGGCAACGCCTTGCATCAAAGCAATTTCGCCGAGCGAGGGATGGACAAGTGGCGGTGCACAAGTTATAATTGTCGGCGATAATTTCTTCGATGGATTGCAAGTTGTCTTCGGCACGATGCTTGTGTGGAGTGAGCTGATAACCTCACATGCGATTCGTGTGCAAACACCACCTCGTCACATTCCGGGCGTCGTTGAAGTAACTTTATCCTACAAAAGCAAACAATTTTGCAAGGGATCACCCGGGCGCTTTGTCTATGTTTCTCTCAACGAACCAACGATCGACTACGGTTTCCAACGACTTCAGAAACTGATTCCACGTCATCCGGGCGATCCGGAAAAATTACCCAAAGAAATTATTCTGAAGCGTGCTGCAGATCTCGCGGAAGCTCTGTACTCGATGCCACGTTCGCCGGGCGGATCGGGCAGTTTCAACTCGTACACGGGCCAGTTAGCGGTCAGCGTTTCGTCGGAAGGTCAATGGAACGAAGGCGATGAATATACGCGAGCGCAAAGTAGTAGTGTGAGTCCACGAGGAGGATATTGCAGCAGTGCCTCGACACCGCATTCGTCGGGCGGCGGATCCTATGGCAGCGGCAACGGCTACGGACCAACACCAAATATGACGTCATTACCATCGTCGCCAGCGAGCGTTTTCAATTCGGCAtcaagaatgaatggtcacaacaacaacaacaacatgaatGGACTCACATCGACATCGTGTTACAATTCTTACCTTATGCCACAATGCAGTACGGGACTCGAGCAGCAACCGAGTAGTTATGACATCACAGCAAGTGCGCTAGTGACTTCAGCTACGAAGTAA
- Protein Sequence
- MRRFQVVIATQVTVEGPLLAISDNMFVHNNSKHGRRAKRMDPEGTGNSPLGISGHPLAPDSTYDGIYPPLPMATPCIKAISPSEGWTSGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSGSFNSYTGQLAVSVSSEGQWNEGDEYTRAQSSSVSPRGGYCSSASTPHSSGGGSYGSGNGYGPTPNMTSLPSSPASVFNSASRMNGHNNNNNMNGLTSTSCYNSYLMPQCSTGLEQQPSSYDITASALVTSATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099431;
- 90% Identity
- iTF_00402504; iTF_01276752;
- 80% Identity
- iTF_00402504;