Cbre002145.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culicoides brevitarsis
Gene Symbol
ARID5B
Assembly
GCA_036172545.2
Location
CM070085.1:21715966-21720085[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-16 6.9e-13 48.6 0.3 2 89 358 438 357 438 0.90

Sequence Information

Coding Sequence
ATGACCATTTTAATGAAGgtgtTTGGTGGACCATGTGGATGTCATGGACCTTACACTTTTTTCAAGGCATTGAAATTGACACCGCCACCAAGTGTGAATAGTCTCCAAAAAGTACAAAGCAGGAATACACGGAAGTGTGTTGAAAATAGTAGAAAACAAATCCGAGGATGTCGCCGAGAGTTAGTATTAGCGTTAGGAGATTGTGTCCCAGTGCGACCGTGGGAAGACTCTCCTATTGCATGTCTTGCCGAAATTCGGATGATATGGAAAGACAAAAATGAACAGGGGCTACTGACTAGTCTTCGGTTGTATTTTTTGCCAGAAAATACTCCGAATGGTCGAAATGTCCATGGAGAGGATGAAGTAATTGCTCTGAATGAACAAATTGTGCTTCGTGCTGATGATTTGATGCAATGGGTCGTCGATGACCTGGACTGGAACTGGGGATTAAATGCTGTTTTTGTTCCGAATGGCGAAAATAAAAGcgctgatcaaaaaattaaagttactcATTTACAAAGTACTCAACTAGAATTCAACGATGTCGACAtcgaaaaatctaaaaATAAAGATTTGGTGTCAAAAGTAGCAGTCATTAGTTATCCGCGATATTGTCGTTATCGTGCAACTCTAACACGATTGGAGTCGGTGCAAGATGAATGGATTCGCAATACTCTCGTAGAAACAATTACCGGATTCGTTGCCTACAGTCCAAATATGAAAATCATGTTCTGTCGCGACACGTTTGAATATCCTGAACTTGAGACTCACGAAAACTTATGTAATCATTTGGCTCCCAAACTTAAAGGTCGCCCACGTAGTAAACGGCGTTTAAGACGCAGCGAGTCTCCATACAAAAACGAATCATCTGAAGCAGATTCAGATGCAGATGAGTCAGACGCGTCAGCATGCTCGGTGGAGAAAGCTCAACCTCGATTCAATATTAAACCACAGCTTCGAAATACACATCGTCTTGTACGACGTCCTACTAAATCAGAATCATCTGAAGTGTCATCACCGGAACTAAAAGCTTCATACGATCGAAAAGTGCGAAGTAATTCATTACCTGACGAGAAAGCCTTCTTGACTCGTTTGAACAACTTTATGGTTAAGAATCCCGAATTTTATCCGAAGATGGTTTGGATGGAACTTCGCCAAATCAACTTGTATAAAGTTTATATGAAAGTACAAAAACTAGGAGGCTACGATGCAATAACTGATTTGCAAACATGGAGACTAATGGCAAATGATCCAAATACTGAAGATGGtgcaatgatgaaaaataaatacgaaaaGATCCTGCTGCCGTTCGAAAGGCATGATACTGAATTTGGAACTCATGCAAAATACCGTTTACAAAATCTTGAACGCCGACTCTCGCCATCTTTGGAAATAATTCCGATTAAGAAAGAAGATTACAATGGCAAAGAGTTGACGAAAGaacaaatgatgaaaatacAAAGCTTAGTGAAATCTCGAGGTACTGAAGCCGATAAACGGGATGATGATAGAATGTCTTCAGTATCGGTTCCCTTAACGACGACAATTACTGTTCAATGCAATGACCAACAAATTAtgaatcaaatcaaaattacaaatcaaattcaaattcaacagATTCGCGTTAATGCGGAGGATAGTCCCCTGCGGTGTAACATAAAGCAAGACAAATCGAGCTCAGACGTTTCAGAAGAGAGTGGAACAAACAAACCATCTTCTACACAAAGCAAGACTTCCTCTTTGAGAAATGTTAGGAAATCTGTAGCAACTACTCCGCCAGGAGGTCAGCGggaaaaagaaaacattccattatttttaGGATGCAAGTCGACAACAATTACTCCAATCGTGAGTGTCGGTTCGAGCACAATAAACTTGAATAGCACGCCAAAGGAACAAATTATTGTTACGCCAGAAATTGTTGATTTGGCTGACAACAGTGACTCCGAGAGTTCGTCACGTGGCACTAAACGTAGTGGTGCGGAGTCTCCAAGTTtggcaaagagaaaaaagttggACATGTTGAAAGCTGGTGGCCTCGAAGTTACGCCGATAAGTTCAAACTCAGCAGCATCTGCTTTTTGGCAACGAGATCTGTTTAATGCCGCAGGCTCAATGAATCCCGAAGAGTTTTTAAGGACGTTAAGTAGTAAATTAGAGATAACTCCTTCGTCGACACAAAACAAATACagtacaaaacaaaattcgaAAGTGCCACCACCAAAAAATCGTGCGGTTTTTACGTCTGCATCACTGCCAAAACTGCAGCCCGTCGGAATGTACGCACAAACAGGACGGATCTATGGAGATCCAAAAGAAATCCTACCTCCAGATTATCAAAAATCTTCTATTAGCAGTACTATAGATTTAACAGCACAAACAACACAACAATACCAACCACATCATCAGTCACAACCATCAAGAACGAAGACAAATTTCGTCAGCAGTTCAGGTAGCAGTAGTAGTAAtagcaaaaataatacaattcCAGTGACCCAAGTCATTCATGATAAGAGACTACCACCGTCGCTGATTCCAGCCATAAATTtggcacaacaaaaaatgaaaaacaatgcTGGACTACAAATTTCTTTGGTGCAACCGCCAGCAACTTCGTCCACACACGTACAAAATATTCACAATTCTCAAAATCACAATATTAAACGAAAAGAAGTAACTATTCAACCGACCTCGAGTAGTTCGTCTAGATCTGACAAAAATACGAACAATCATCGAGTTAGCTCACCGATGAACAATACTCCAGCAGCAGGATTGCCTAATCTGGCACTTGCAAACTTATTTTCAAATCCATTACTATTTGCACAATATATGCAACAAGCAGCCTCAGCTGCAAACCCTCCACCTGGAATGGGAAGCAAGCAATCTCCAACGAGCTCGTTACCACCACACTTGATTCCACCCGGCTTTAATCCAATGATgaatgctgctgctgcatcACAAATGGCTCGAACAAATCAACCGAATCCATTTTTATCGATAATGGACCACCCTCTGTACTTATCGGCATTATGTGGCAATCCAAGATTATTGATGCAAAATGCAATGTCACCTGAATTGTtgcaacaaattttgaaaaatctaccACCAAAAGACACGCCAGTTTCAAAAAGttag
Protein Sequence
MTILMKVFGGPCGCHGPYTFFKALKLTPPPSVNSLQKVQSRNTRKCVENSRKQIRGCRRELVLALGDCVPVRPWEDSPIACLAEIRMIWKDKNEQGLLTSLRLYFLPENTPNGRNVHGEDEVIALNEQIVLRADDLMQWVVDDLDWNWGLNAVFVPNGENKSADQKIKVTHLQSTQLEFNDVDIEKSKNKDLVSKVAVISYPRYCRYRATLTRLESVQDEWIRNTLVETITGFVAYSPNMKIMFCRDTFEYPELETHENLCNHLAPKLKGRPRSKRRLRRSESPYKNESSEADSDADESDASACSVEKAQPRFNIKPQLRNTHRLVRRPTKSESSEVSSPELKASYDRKVRSNSLPDEKAFLTRLNNFMVKNPEFYPKMVWMELRQINLYKVYMKVQKLGGYDAITDLQTWRLMANDPNTEDGAMMKNKYEKILLPFERHDTEFGTHAKYRLQNLERRLSPSLEIIPIKKEDYNGKELTKEQMMKIQSLVKSRGTEADKRDDDRMSSVSVPLTTTITVQCNDQQIMNQIKITNQIQIQQIRVNAEDSPLRCNIKQDKSSSDVSEESGTNKPSSTQSKTSSLRNVRKSVATTPPGGQREKENIPLFLGCKSTTITPIVSVGSSTINLNSTPKEQIIVTPEIVDLADNSDSESSSRGTKRSGAESPSLAKRKKLDMLKAGGLEVTPISSNSAASAFWQRDLFNAAGSMNPEEFLRTLSSKLEITPSSTQNKYSTKQNSKVPPPKNRAVFTSASLPKLQPVGMYAQTGRIYGDPKEILPPDYQKSSISSTIDLTAQTTQQYQPHHQSQPSRTKTNFVSSSGSSSSNSKNNTIPVTQVIHDKRLPPSLIPAINLAQQKMKNNAGLQISLVQPPATSSTHVQNIHNSQNHNIKRKEVTIQPTSSSSSRSDKNTNNHRVSSPMNNTPAAGLPNLALANLFSNPLLFAQYMQQAASAANPPPGMGSKQSPTSSLPPHLIPPGFNPMMNAAAASQMARTNQPNPFLSIMDHPLYLSALCGNPRLLMQNAMSPELLQQILKNLPPKDTPVSKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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