Cbre008401.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- Jarid2
- Assembly
- GCA_036172545.2
- Location
- CM070086.1:29234257-29241930[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 2.3e+03 -1.2 0.1 55 83 177 207 168 208 0.71 2 2 5.2e-23 8e-20 70.8 0.0 6 89 1540 1621 1535 1621 0.93
Sequence Information
- Coding Sequence
- ATGGTTGTTTCGCGCGGAAAACgaaaacaaaaggaaattgCAACACCGAAACCAACTCCTGAGCCACCAAAGCGtctgAAATTTCAAGCACAACGCAAATTCGCGCAAGGTCAGGGCCATCCCGCATCAACTtcgaattatttgaatttcgcCAATAGCTCGGCTGCGAATTCGTCACAAGTGACGCCCGTGAAGGAGAATCAAAATCCGCCGCCGGAATTGCTTCCCAACCAACGACCAAACACCGAGGATTTTCTCACGTTCTTGTGTTTTCGCAATACGCCCGTGTTGCCGCCCGCATTGGATTTTCTCAATCCGCAGAAGCAACGCAAAGCCCAAGCCGCACAAAAGACCAAATCGCCGGAAGCTGCCAAGAAAATGGGACTCACGAGCTCGACATCCAAATCTTCCGAGGCAAAAGACGACGCAACGACTCCCaaaaaaacggaagaaaaTGGCGGCGAATCGTCGAGCAGCACCAAGAAACCGGCTGCGTTTCCGGGCGCCGTGCGAAAACGCGCCGAAAAAGTCCCCATGATGTCAAACAAGTTCCAGCAGAACGacaaaaagcagaaaaacgaCACAAAAGTCGCGAATGCGCTGAAGAAAAAGTACGCAAAACTGAATAAAGTCACCGCGAAAGAGACTCGCAGAACTCGCGCACACCCAGAAACcacaaacgacgacgaaaacgacgccgaggaagacgaagaagaggaGGAAACTACGGAAATGCCGCAAAAACGCAAGTCTAGTCTACACAAAAGTGTCAGCAATAATAGTTTAGACGACGGTACGCCAGTGAAAAAGTCCCCGCGAACCACGGGATctctcaaaaatgtcaaaaaagacGAATCAGAGACTGCATCGGACAAAATCAAGAAACGGCGAGGCAAAAAAGCCGCTTCTGAAGACGAAAACGACGAGGATACCGCAACGCATGATGACTCAAAGTCTGAAGAAcccgaaaaaatcgaaagacgTCAAACGCGTTACGCTTCTTTTCGTATTCCGCCACCGCTGAAGAAGGAACGCAAGAAGAAAACCGACTCGCCTGTGGTAATGTTGAAGGAAAAAACACCCGAAAGCACTTCAGCAGCGCCAACAGACAACAAGAAACCATTAAAAGTCGACAACGTCAAAgaaagcagcagcaaaaaaaattccgcTGATGAAAAGGACGAACATGTGaacaaaaaactgaagaaagaaattgatttttcctcAGAGGATGACGAACCGCTTGTCAAAACAGGCAAACGAACGCCTTTAATTGAAAGCGATGAAGGAGTTTCTAAGCCTGGTCGTCGTACGTTGCACAAAGGACAgccaaaaaagtcaaatttcatCGATGAGATTGTCAAAAAGTTGGATGACGACAtcgaaaacgagaaaaaacccGAAAGTGCTTCTGCTGACACAGCGCCAAAAGCTGCTCGTGGCAGACCGAAGCGAAAATCGGCACCGGAAGCAGCATTTGACGCGAAAAAACTGGCAGTTGAGTCAAAAAACGCATCGCCCGTTCCCACAAAAGGACTCGCCGATAAGAAATCTCCGACGCCGGGTTCGACAAAACTTCGTTCTCCGACTCCCGgctcaaaaactgaaaacgaATCGAAGGAACGGAAGAAAATTGGAAGAGCGCGACGCACAAATGTCAAGGACAAGGTTTCGATAGAGTCCATTGCCGATGATTCGGAGAGCGAAACGGAAGTTCGTGCGGCACGACCTTCGCGAAAAACCAAGGAAGCTGCGACAATTTACATGGAGCTGATCGGGCGCAAGTTGAGTTTGAAAGAATTGTCGGACGACGACAGCTTGGATAGTTTGGAGTTGCCGAATATCCAAAGGATGCAACAAATGGAGGACGAGATCAAGTCGATTCACGACAAGCAGGTCGAAATGGCGGCAAAAAACGCGTCGTCACCGGTAATGAAACCCAGTGAGGGTAAAACGGGCGACGAACCGGTGAAGAAAAAGCGTGGCAGGAAGAAAAAAGAGACACCTGTCGCGGAAACAACGCCCGTTGCTGACGAAAAAACGgaagaaaagccaaaaattttggagaaaaGCTTCGATGATTCGGATGAAGAACCGCTGGCGACAAAAGCAAAGACAAAAAAGGAGGCAAGTGGCGGAAAACGAGGCCGAAAAACGTCGACGCCAAACAAAAAAGACATTCCTGCGGAGATAAAAGTGCCCGAAATCCAACAAACGCCCTCGCCAGTCAAGTTATCAAAGTGGCAGGAGCGTCTTTTGGCAAACAGTTCGCCCAAATCGAAGACAACAAGCAGTCCCGTGGCACAAAAGCTCTTCGAAACGAGTCCCACGAAGGATGTACTTAACAAAACGGACGATTCGCTAAAAGTTCACAACCGTTCGTCAAATGCCAAGGTTTTTTCGCCCGATGCAAAAGCCACAAACAAGCCAAGCACCTCGGAAAATGTCGAAACTGCGCCAAACACAACTAAGGAAAAGCCCTTTGTGCGTCCCAGCAAGGTAGAAAATGTCGTGGCAACCGAAATAatcgacgatgacgacgacgaaacaCCAAAACCCCTCAATCTGGCGCCAAAATCCCTCCTCGGCAACTTGTTGCCCAGCAAAGAGGAGCAAAACAAGATTTTTGGCATTGCCAGTATCACGCTGGCGCAAAGTTCGGGTCCCATGGATACCAAATGTCATCTCGGCAAATGCGGATCTGTGCATAAGCCACTTGGGCCCGCTGTGCTCACGGAAAGTAACTTGGGAGGGCATTTGTCGCCGAAAGATCGACGAAAAAGCAAAGTAAACATGTCGAACGAGCAGATTCAACGATGGATCGAAGGCATTCAAGTGACTCCCGTGCCCGATGATTTGGATGATATCGAGTTGGATGGTCCCGTAACGAAAATGAGCCCGTATCCGAGCAAGGATTTCATGGACGAGTCATCAAGTTCGCAAAAAACAGTCACGAAAAAGGAGGAGAAACAAAATTCGCCCAACAAAAATCCAACGGTTCAAGCCGCAAAGCTCGGAGTGCAACTCAACAAAgtgaaaaaagaggaaattccCACGACGTCGTTCAATGTGACAGAGAAAATCAACAAAGAATTATACAAAAGTCCGGAAGTGAAGAAGGAAAGTGAAAAAGAGACGCCGAAATTGGTACGAAGCACCCCCGAGTTGTTCAATGCCAAAGAAAAGGAGAAACTTTCGCCCCTAAAATCCACATCAACGTTGACTCCTCCAACGCTTCCGCCGAAAATCACGAGCATTCCGGATGTCGTGCCCAAAATCATGGTTCCCACGAGCAACAACAAGACGGAAACAACTCCCACAACGGTTTCATCGCCCATCCTTTCAACGCCCCTGAGTTTGTTCACCACAAAAACGACGCCCCTGAAGTCGCCACTTCCCAAAATTTCCGACACAAAGCCGCCATCGAGTGTCGTCAACACGAGCACAGCAGTCAACAACatcacaacaacaacgccAACTTCTTCAAATGCGGACAAGAAACCCGTTTATTGTCCGATCAAACGTACGCCAATTTACAAGCAACTCGATGCGCCAGCAACGCCAACCTCAACTTCGAAGCCCGTCGTGAACATTTTCGGAACATTTTCagctgaaaatgaaaaatccatTTACTCTTTCGACGAACCGGATGCCGATTTGGAgggaaaaaagacaaaaacttcGCCGTCGAGCAAAAAAGGAGGTCGTCGCAGTGGCTCGTCGTCCCAAAAACCGCAAGGAAACAACGTCGACGGCGATTTCAAGAATCCAACTCCGCCGAAAAATGCAAATCCAGCAGTTTCGTTGACTCTCAGTCCGGAGGAAAGTAGCAAAATTGCCGCCATAAATCTCACAAACAATCACGAACCGAAAAAGGAAGAGGATGCAGACTCAGATTCTGAAGGACAAACGTTCTACATCCCCCTTTCATCCGCAAATATTGCTGGTAGCAGTAAATTGGGCGAAATGATCCAAGGCGTAAAACTAAAACTGGGTACTGAGGGTCCCGAAGGACCCAATCAACGCGTCATTATGCACGCAAAACTCGTTACAAAAGCCGAAATGGGCGACAAAAGCACAACTCCCATGCCGGAGGGCATCACAAATATGACGGAAATTGTCAAGGCGTTGACCAGCAGCAAAGATATGATCGGAAAATCGGTGCCTGTTGGAACAGTTCAACCTAGATTCAAGTCTGACGAGTTGGAAATGAAAACGGTGACAGTTCCTGTGTCGCTTCCAACGACTCCTGTTGTTGAAACGCCTCCGCCTGCTGGCGCATTATCGCGAATTAACTCAAATTCGTCCCTGTCGTCAGCTCGTTCGAAACTAACAAAGCCTTTGATTCAACCGGCGAACCCGTCGACGTTTCCGCACATCAATGACAGCGCCCAAATGGTCGAAGCTCCCATCTTTCGGCCCACGGAGAAGGAATTCCAAGACCCAATTGAGTTTTTCGAGCGAATTTTGCCGGTAGCTGCTACTTTTGGGATTTGTCGTGTCATTCCGCCAGCGAGTTTCAAGCCGGAATGTCGCATTTCGGACGACATGCGATTCACGGCATACAACCAGTACATCCACAAGATGCTGTATCGCTGGGGTCCGAGTGCCAAAGAACTGGCTGCCATCAAAAAGTACTTGGAAACGCAAAACATCTCGATGCAACATCCTCCGTGGATTGGCGGCATGGAAGTTGATTTGCCGCGTTTGTATCACACCGTACAAGAGCTTGGCGGACTAAAAGAGGTGatcgagaagaaaaaatggcCCAAAGTCTCGGAGGAAATGTGCATTCCGAAAACGGCGCACGATCGTGTCTCGAAACTCGACGACATCTActgtaaatatttgttgcCGTACGACACGTTGTCGCCGAGTGAGCGTCAAAAGCTGTTCGACGAAGTTGAAGCTGACTGGGCAAAGCAGGAGGCCAAGGCACGACGCAACGCCGATCGTTTTCGCGGGTCCGAAGATGATGACAGCAACCAATCGTCATCGACGGaagacgaagacgacgacgacaacgagtgTTCCATGGAGTGCATGGTCAAGGGACGCAGCATGCCGTTGAACCAATTTTTCCGTATTGCTCGCAACACGATGTCACTTTGGTTCAAAAATGCTGAACCCACATCGCAGGAAGTCGAAGCTGAATTTTGGCGTCATGTTGCGGTGCGAGACAGTCACGTTTGCGTCAACTCCGGATCAATTGACTCGTCGGGATATGGCTACGGGTTTCCGACGCCGGGTCCCAAAGGCAAAGGATCGCCATGTGCCAAACATCCGTGGAACCTCAAAGTGCTAACGAACAATCACGGATCCATTTTGCGTTCACTGGGACCTGTGACGGGAGTTACGGTGCCCACAATTCACGTCGGGATGCTTTTCAGTGCGTGTTGTTGGTATCGCGATCCACACGGATTGCCTTGGATCGAATATATGCACACGGGTGGTTCGAAAATTTGGTATGGCGTGCCTGATGAACAGAGCAACAATTTCCGCACGGCACTGACAAATCTCATTCCGACACATTGTCAGAGCAAAACGGTGTGGCTTCCGTGCGATACAGCGATGGTTCCTCCTCACATGTTAACCGATAAGGGAGTTTCGTTGTGCCGAACTGAACAAGAACCCGGACAATTTGTCATTATTTTCCCGAGAGCTTACACGAGCAGCATTTGTACGGGATACACGGTGTCGGAAAGTGTCATGTTTGCGTCGAGCTCGTGGCTGGAAACGGCAAAGGCAGATTatgagGACATGCACGAAAGTTGCGAGCCAGCGATGTTCTCATTGGAGCAACTTTTGTTCGCGATCGCCAGTGATCAACGTTCCAGTCAAGAATTACACGCGCAAATTCTTCCGATGCTCATCGAGGTttacgaaaaagaaaaatccgacagaaaagctttaaaagaCGCCGGCGTTGTTCAAACCGAAAAAATCCCGATAGGCAAGAAAAAGATCGCCGAGGAGTTTGAATGCGAAATTTGTCGTGCCAACTTGTCCATTTCCCTGGTAAAAGTCAAACAAGACacgaacgacgacgaggaCGAAGAAGAGGAAGAAACGATTTACTGCCTGCGTCACACGCTAAAGAACATCCAAAGTAACCGTTTGACACCGAAAAACTGCAAACTCGTGTTCAGCTACTCGATCGACGAAATCGAAGCACTGATTTCCAAAATCAAGGATCGCGTGCAAACGCAAAACAAGGGCAAGAAAAAGGACGGAACGacatcacaacaacaacaacaatcggGCACCAGTGGAAGAAAATCGAATTCAAACTTGTACCAACCGTCGTCGTCGAGCAAGTACAGCGGCATGCCGACGATgctgaagtaa
- Protein Sequence
- MVVSRGKRKQKEIATPKPTPEPPKRLKFQAQRKFAQGQGHPASTSNYLNFANSSAANSSQVTPVKENQNPPPELLPNQRPNTEDFLTFLCFRNTPVLPPALDFLNPQKQRKAQAAQKTKSPEAAKKMGLTSSTSKSSEAKDDATTPKKTEENGGESSSSTKKPAAFPGAVRKRAEKVPMMSNKFQQNDKKQKNDTKVANALKKKYAKLNKVTAKETRRTRAHPETTNDDENDAEEDEEEEETTEMPQKRKSSLHKSVSNNSLDDGTPVKKSPRTTGSLKNVKKDESETASDKIKKRRGKKAASEDENDEDTATHDDSKSEEPEKIERRQTRYASFRIPPPLKKERKKKTDSPVVMLKEKTPESTSAAPTDNKKPLKVDNVKESSSKKNSADEKDEHVNKKLKKEIDFSSEDDEPLVKTGKRTPLIESDEGVSKPGRRTLHKGQPKKSNFIDEIVKKLDDDIENEKKPESASADTAPKAARGRPKRKSAPEAAFDAKKLAVESKNASPVPTKGLADKKSPTPGSTKLRSPTPGSKTENESKERKKIGRARRTNVKDKVSIESIADDSESETEVRAARPSRKTKEAATIYMELIGRKLSLKELSDDDSLDSLELPNIQRMQQMEDEIKSIHDKQVEMAAKNASSPVMKPSEGKTGDEPVKKKRGRKKKETPVAETTPVADEKTEEKPKILEKSFDDSDEEPLATKAKTKKEASGGKRGRKTSTPNKKDIPAEIKVPEIQQTPSPVKLSKWQERLLANSSPKSKTTSSPVAQKLFETSPTKDVLNKTDDSLKVHNRSSNAKVFSPDAKATNKPSTSENVETAPNTTKEKPFVRPSKVENVVATEIIDDDDDETPKPLNLAPKSLLGNLLPSKEEQNKIFGIASITLAQSSGPMDTKCHLGKCGSVHKPLGPAVLTESNLGGHLSPKDRRKSKVNMSNEQIQRWIEGIQVTPVPDDLDDIELDGPVTKMSPYPSKDFMDESSSSQKTVTKKEEKQNSPNKNPTVQAAKLGVQLNKVKKEEIPTTSFNVTEKINKELYKSPEVKKESEKETPKLVRSTPELFNAKEKEKLSPLKSTSTLTPPTLPPKITSIPDVVPKIMVPTSNNKTETTPTTVSSPILSTPLSLFTTKTTPLKSPLPKISDTKPPSSVVNTSTAVNNITTTTPTSSNADKKPVYCPIKRTPIYKQLDAPATPTSTSKPVVNIFGTFSAENEKSIYSFDEPDADLEGKKTKTSPSSKKGGRRSGSSSQKPQGNNVDGDFKNPTPPKNANPAVSLTLSPEESSKIAAINLTNNHEPKKEEDADSDSEGQTFYIPLSSANIAGSSKLGEMIQGVKLKLGTEGPEGPNQRVIMHAKLVTKAEMGDKSTTPMPEGITNMTEIVKALTSSKDMIGKSVPVGTVQPRFKSDELEMKTVTVPVSLPTTPVVETPPPAGALSRINSNSSLSSARSKLTKPLIQPANPSTFPHINDSAQMVEAPIFRPTEKEFQDPIEFFERILPVAATFGICRVIPPASFKPECRISDDMRFTAYNQYIHKMLYRWGPSAKELAAIKKYLETQNISMQHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWPKVSEEMCIPKTAHDRVSKLDDIYCKYLLPYDTLSPSERQKLFDEVEADWAKQEAKARRNADRFRGSEDDDSNQSSSTEDEDDDDNECSMECMVKGRSMPLNQFFRIARNTMSLWFKNAEPTSQEVEAEFWRHVAVRDSHVCVNSGSIDSSGYGYGFPTPGPKGKGSPCAKHPWNLKVLTNNHGSILRSLGPVTGVTVPTIHVGMLFSACCWYRDPHGLPWIEYMHTGGSKIWYGVPDEQSNNFRTALTNLIPTHCQSKTVWLPCDTAMVPPHMLTDKGVSLCRTEQEPGQFVIIFPRAYTSSICTGYTVSESVMFASSSWLETAKADYEDMHESCEPAMFSLEQLLFAIASDQRSSQELHAQILPMLIEVYEKEKSDRKALKDAGVVQTEKIPIGKKKIAEEFECEICRANLSISLVKVKQDTNDDEDEEEEETIYCLRHTLKNIQSNRLTPKNCKLVFSYSIDEIEALISKIKDRVQTQNKGKKKDGTTSQQQQQSGTSGRKSNSNLYQPSSSSKYSGMPTMLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -