Cbre013316.1
Basic Information
- Insect
- Culicoides brevitarsis
- Gene Symbol
- nfil3
- Assembly
- GCA_036172545.2
- Location
- CM070087.1:32099457-32101137[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.3e-13 6.5e-10 38.7 2.8 2 51 88 137 87 144 0.91 2 3 6.7 4.7e+03 -2.5 0.3 38 47 315 324 313 325 0.74 3 3 0.0073 5.1 7.0 0.1 36 61 445 470 442 472 0.90
Sequence Information
- Coding Sequence
- ATGATGGTGGCAGAATTTGTCGCCCGACAACAATCTGGTTCGCCAGTTAACGGAGAAACTGCTAATCAAAATCACAATTCAAATATGccagCACACAGTGCTCTTCTTTTGGCCAATAATGGTCCATTATCGCCCGGATCTCCCGGACCCGAAAATTTCCCGTCAaacaatttgaacaatttcgaGTTGGCAGCACAAATGCGGAAGAAGGATCTCTTTTCGCAGCGCAAACAACGCGAATTTATCCCGGATGCGAAAAAAGACGACAGTTACTGGGATCGGCGTCGTCGTAATAACGAAGCGGCGAAACGTTCACGTGAAAAGCGTCGTTTCAACGATATGGTATTGGAACAACGTGTGATTGAGTTGACTAAAGAAAATCACATTCTGAAGGCACAATTGGATGCGATCAAGGACAAATATAACATCAGTGGGGAGAATTTGGTGAGTGTGGATCAAATTTTGGCGACGATGCCGACGAGTGATCAAGTCTTGAGTTTCACAAAACGTCCCAAGCTGAGTCGTAGTCCGGGTTCGTGCAACGAAAATAGTACGCCAGCACCGTCGCTCATGTACCCGAACTCGCCAAGTCCCGTACCGACATCCGTTATCCATCAAAATATCAATGGATCCACCGTTTCGCCTCCTCCGTCAGTTCCTCAAGTAATCAATAATGCGCAAGCTCagcaaattcagcaaattcaaCCTCAATCCTCGTCGCAACAACAAaaccagcagcagcagcaacaacccCTCTTGCATCCGCACATTCAATCAACCGCCGCGGCAATGCCGCAATTGCATCATCATCTGCATCAATTCAGACCGCAACAGCAAACGAGTCCCCAGCCGCAACGCGTTCCCGAGCCAGATGCCGATTACTTGTCGTCGCATCATCATCCGCATCATTACGCATCCGCCGCCTACGCCTACCATCATCAGCAACAGCAAAACCAGCAACTCAGACCCGAAATGCCCAGCAAGGAGTCCATCAGTGTGTTAAACTTGTCACGACGCGCCCACAGTCCGTACGAAATTTCGAGCGGCGGCAGCGTCGACGAGGACCACGAAACGCATGCATCGCGCGAAAACGACACAAATAACAGTTTGCCATTAAAGTTGCGACACAAATCGCATCTCGGCGACAAAGATGCCGCTACGGCACTTTTGGCGTTACACAATATCAAGCAGGAACCCAATCCGCGATGCTCGCCGCCGTGGGATGGCGAAGGCTCCAGCGACGAACGTGACTCAGGTATTTCCATTGGCGCCGCAGACTGGACTGCGAGTATTCAACGCAAGATTATCGTGCCCGTTGACACCCACAATAAAGATGCCGAAGAGGAAAACATCCATCTCAAGTCGCAACTCGCCCGACTCGAATCCGAAGTCGCTACCATTAAGAACATGATGATCGTCAACACGAGAAACGGTGCTACCGCAGCGGCACAATAA
- Protein Sequence
- MMVAEFVARQQSGSPVNGETANQNHNSNMPAHSALLLANNGPLSPGSPGPENFPSNNLNNFELAAQMRKKDLFSQRKQREFIPDAKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVIELTKENHILKAQLDAIKDKYNISGENLVSVDQILATMPTSDQVLSFTKRPKLSRSPGSCNENSTPAPSLMYPNSPSPVPTSVIHQNINGSTVSPPPSVPQVINNAQAQQIQQIQPQSSSQQQNQQQQQQPLLHPHIQSTAAAMPQLHHHLHQFRPQQQTSPQPQRVPEPDADYLSSHHHPHHYASAAYAYHHQQQQNQQLRPEMPSKESISVLNLSRRAHSPYEISSGGSVDEDHETHASRENDTNNSLPLKLRHKSHLGDKDAATALLALHNIKQEPNPRCSPPWDGEGSSDERDSGISIGAADWTASIQRKIIVPVDTHNKDAEEENIHLKSQLARLESEVATIKNMMIVNTRNGATAAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -