Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: ZNF438
Assembly: GCA_015732765.1
Location: NC:10018464-10021340[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.7 20 5.6 0.3 2 13 279 290 278 301 0.76

2 8 0.00065 0.018 15.2 2.0 2 23 311 332 310 332 0.97

3 8 1.5e-07 4.4e-06 26.6 1.4 1 23 336 359 336 359 0.96

4 8 0.00027 0.0077 16.4 0.4 1 23 365 388 365 388 0.98

5 8 0.00021 0.006 16.7 0.9 1 21 394 414 394 415 0.96

6 8 2.7 76 3.8 0.4 1 8 443 450 443 451 0.91

7 8 5.7e-06 0.00016 21.6 1.5 1 23 468 490 468 490 0.98

8 8 0.88 25 5.3 0.9 3 23 497 518 497 518 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.7	20	5.6	0.3	2	13	279	290	278	301	0.76
2	8	0.00065	0.018	15.2	2.0	2	23	311	332	310	332	0.97
3	8	1.5e-07	4.4e-06	26.6	1.4	1	23	336	359	336	359	0.96
4	8	0.00027	0.0077	16.4	0.4	1	23	365	388	365	388	0.98
5	8	0.00021	0.006	16.7	0.9	1	21	394	414	394	415	0.96
6	8	2.7	76	3.8	0.4	1	8	443	450	443	451	0.91
7	8	5.7e-06	0.00016	21.6	1.5	1	23	468	490	468	490	0.98
8	8	0.88	25	5.3	0.9	3	23	497	518	497	518	0.94

Sequence Information

Coding Sequence: atggatTTCGAGAGCATTTGTCGATTGTGTGCCAAGGAAAAGAGCACCTTGCGTAATATCGCGGAAGACGAGCGGAACGTTAATCTGGTTGAGCAAATCCGGGATATTATTCGGATTGAGTACGAACCGGACGATGGTCTGCCGCAGCAGGTGTGCAAGGCGTGCGCGACCTCGCTACACCGGATCCAAGAAACGCTGGACGAGTTTCGCGCCAACGATGACCTGCTGCGAAGCAAACAGCACGTGCTTCCCGACGGTGGCGTCGAAATCAAACAGGAGGAGCTGGACGACGAAGAAGAGCAGGGCGAGGAGTACAGCGTGCAGGAAGTGAAGATCGAGCTGCTGGAAACGGAAGCGGAGCTGTCGGATGGTTTGGAGCAGTCCGAGGAATGGTTGGAGGACGACGAAGTCTGCGATGAGAGTGAAGCTCTGGACGAGAGCGATACACCGCAGAAACGACGACGCTCGAGGAAGAGTCCCAGGAAGGTTGAGAAGCTTGACGAGGCAGAGCAGACAAATGAGGATGTTATAATGGCCGAGGTTGAGATGAACAGTCCGAAGAGGAGGCGAGGACGTCGACCAGCGGGCGACAAGGAGGGTGGACGGAGACGTAGGAAACCCGTTGAAGATGATCCGAACCGTCCCAAGATGAACGATTACAAGTGTTACATCTGTATGAGCGAAACGCTGGGATCGGCTTTGAATCTTTTAGATCACTTGAACACGCACACTGATCGTCTGCCGTACACCTGTGAAATATGTGTCCAGGAAACAATCGAGCTGAAACAGGTTCGGTCGTTGAACATACATCTCAAAATGCATCAGCAGCCGGTCAAGTGCTCGTATTGTGATAGACGATACGCAAATGATCGAGCCCGGGACTACCACGTGCAGGCCTTCCATCTAGGTGAAAACGCTCCTTGTCCTTCGACTTGTTCCGTCTGCCAAAAGGTTTGCAATTCGGCTTTAGCTCTGAAAAATCATTTACGCAAACATACGAGTGCGTATAACTGCGAGTATTGTGGCAAAAGTTTTGAGTCCAAGTCAAAGCTGAACCGTCACATCACCCGAATCCACGTCAAGTCGGAGGGCTATACCTGTGGATTTTGCAACAAGACCATCAAAACTCTCGACGCCTACGAGCTACACATTCGCACGATCCACGAAGGTCGGCGGGACTACGAGTGCGAATCCTGCGGGAGACGTTTCACGACGGCCGCCTTTCTGCGAATGCACCAAAAACACTACGACGGAAGAACCTGCAAACCCAAGCAAGACTGGAAGGTGCACTACGAAACTTCGGTTGATGAGCTGGGCGTTAAACGCTTCACCTGCAAGATCTGCAACAAGGCCAACATGCGCTCGATCGGCGAACATCTGCGGTCCCACTTTCCGGAACATCACGTGTGCGCGGTTTGCGGGGCGACCTTCACGCGCAAGAGCGCCTTCGACCGGCACCGGCGAACCCACGAAGAGATGGTCCACGGCTGTTTCAGCTGCGACAAGACCTTCCTGAGCATGCCGAAACTGCGACAACATCTGGCCAAAGAGCACGACATCGGAATGACGCAGGTGGACGCGACCCAGGTGCCGACCGCCGGCACCGAGGAAGAGGTCGTGTTTGACGTTGTTGGGTAG
Protein Sequence: MDFESICRLCAKEKSTLRNIAEDERNVNLVEQIRDIIRIEYEPDDGLPQQVCKACATSLHRIQETLDEFRANDDLLRSKQHVLPDGGVEIKQEELDDEEEQGEEYSVQEVKIELLETEAELSDGLEQSEEWLEDDEVCDESEALDESDTPQKRRRSRKSPRKVEKLDEAEQTNEDVIMAEVEMNSPKRRRGRRPAGDKEGGRRRRKPVEDDPNRPKMNDYKCYICMSETLGSALNLLDHLNTHTDRLPYTCEICVQETIELKQVRSLNIHLKMHQQPVKCSYCDRRYANDRARDYHVQAFHLGENAPCPSTCSVCQKVCNSALALKNHLRKHTSAYNCEYCGKSFESKSKLNRHITRIHVKSEGYTCGFCNKTIKTLDAYELHIRTIHEGRRDYECESCGRRFTTAAFLRMHQKHYDGRTCKPKQDWKVHYETSVDELGVKRFTCKICNKANMRSIGEHLRSHFPEHHVCAVCGATFTRKSAFDRHRRTHEEMVHGCFSCDKTFLSMPKLRQHLAKEHDIGMTQVDATQVPTAGTEEEVVFDVVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -