Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: ken1
Assembly: GCA_015732765.1
Location: NC:205246555-205248705[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0039 0.11 12.7 0.2 2 20 216 234 215 237 0.94

2 10 0.051 1.4 9.2 0.4 2 23 277 298 276 299 0.94

3 10 7 2e+02 2.5 0.7 1 23 306 328 306 328 0.81

4 10 0.00017 0.005 17.0 0.7 1 23 336 358 336 358 0.97

5 10 1.6e-05 0.00044 20.3 1.6 1 23 363 385 363 385 0.99

6 10 0.034 0.98 9.8 0.1 3 23 393 414 391 414 0.90

7 10 5.8e-05 0.0016 18.5 0.4 1 23 463 485 463 485 0.97

8 10 5.2e-06 0.00015 21.8 0.3 1 23 491 514 491 514 0.97

9 10 9.2e-06 0.00026 21.0 3.7 1 23 520 542 520 542 0.98

10 10 0.00017 0.005 17.0 6.1 1 23 547 569 547 569 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0039	0.11	12.7	0.2	2	20	216	234	215	237	0.94
2	10	0.051	1.4	9.2	0.4	2	23	277	298	276	299	0.94
3	10	7	2e+02	2.5	0.7	1	23	306	328	306	328	0.81
4	10	0.00017	0.005	17.0	0.7	1	23	336	358	336	358	0.97
5	10	1.6e-05	0.00044	20.3	1.6	1	23	363	385	363	385	0.99
6	10	0.034	0.98	9.8	0.1	3	23	393	414	391	414	0.90
7	10	5.8e-05	0.0016	18.5	0.4	1	23	463	485	463	485	0.97
8	10	5.2e-06	0.00015	21.8	0.3	1	23	491	514	491	514	0.97
9	10	9.2e-06	0.00026	21.0	3.7	1	23	520	542	520	542	0.98
10	10	0.00017	0.005	17.0	6.1	1	23	547	569	547	569	0.97

Sequence Information

Coding Sequence: ATGTCTTGCCCGGAGCAGGACAACCCACTAGACGTGGATATTTCCACCGATACGACCGGCAACTCCACGGTGGACAAATTTTGCCGGCTCTGTCTGGAGGTTCAGCCCGACCTGCTGCCGCTCAAAGCCCGCCTCGGAGCGCTTCCGGTGCCGAAGATGTTCGCCTTGCTGACCGGGCTGGAGATCGACTTTGACGACGACTACCCGAAGGTGGCCTGTTCGCAGTGTTTCTTCAGGCTGGAGCAGGCCTACCAAACGCGGAAGGACTTTCTGGATAATTATCGCACGCTGATGAGTATCGTGATTGCCGAAGGGCCGGAGGCGTGTCCGGCGGAGAATGTGGTTCGAGAGGAAATTGTCGGGGATGAGGATTCGGATGGCATTAGTACTATTAAGGAGGAAAATTTATCTGATTTAAAAGACGTAGAAATTCAAGAGGATTGCTCGGAAAAGTTAGAGAGTCCTGAGGATGATGACCTTGATGACGATGAATGTGTCCCTTACGAATCTATTAAAGATGAGCTGTACGAACAAAAAATCCCTACtagaaagaaaccaaaaataagtATACCAAAGCTAAGCTCACCCATATCGATCtacgaaaaaaagaaacaccTTCGCAAGGTGTGGAGAATGGACCCCAAGAAGTGCTACATCTGTGGCCAGCTCTTCACAAGTCCTCGCGAACTCAATATCCACCTGCCCCAGCACGTGGACATGCTGCCGTACACGTGTCAGCAGTGCGTTAACGGAAATGGTCCGCAGAAAGAGCTCATAACCGGCCTGAAGCCGCTGCTCACTCACTTCCGGCAGCACTCGGGTTGCACGCCGTGTCCAAAGTGCCCGTTCCGACTGTTTGGCAAGGAAGCGCTGTACAATCACATTCAGATTCATCACGCGCACGAGGGGCAAaagtttgtgtgtgaaacgTGCGGGTTTGTGATGCCGAACAAGAGGGCCCACTATGGGCACATGTTGCGGCATAGGTACATCGAGGAGGGGCGGTTCCGTTGCGAACAGTGCGATATGAAGTTTGGGACGAACGGGCGGTTGCAGCGGCATTTGTTGCTGCACAAGGAGAAGGAGTTCCGGTGTCAGTTTTGTCCGAAGACCTTTGTCAGCAACACCCTGCTGCTGACGCACGAGCGCACCCACTCGGGTGGCCAACCGTCGATTTGTGGGACGTGCGGCGAAAAGTTCACCAACCCGACCAAACGGTGGCAGCACGCAATGGAGGCGCACCCGGAAGTGGTCCAGGCGAACCGGGAGGCGGGTCACTACCCGAAACACCAGCCCAAGAGTCTGATCTGCGAGCACGCGGGCTGTGGCTACGAGGCGTCCCATTATCAAGCCTTTTGGTATCACGTGCAGTGTCACGAGCTGCGGTACGCTTGCGAGCAGTGTCCGAAGCGGTTCCCCACGTCCCAGGGCCTGAAAAGCCACCGGACGGTTCACACCGGTGAGCGGGCATTCCCTTGCGAGCAGTGCGGTAAACGGTACTCGCAAATGGTCGCCCTAACGAAGCACCAGCAGACGGCCCACTCGACGGCCACGCCGCACACCTGTGCCGAATGTGGCGAGTCGTTTTCGCACCGGTCGCGGCTCAACAATCACATGCTGAAGCACTCCGAGCCGCAGCACCATTGTGAATACTGCAATCGGATGTTCCGGTACAAAGGGGACTGGACGCGGCACATGAAGCAGCatgaagaagaagaaagaaATGTTGGATAA
Protein Sequence: MSCPEQDNPLDVDISTDTTGNSTVDKFCRLCLEVQPDLLPLKARLGALPVPKMFALLTGLEIDFDDDYPKVACSQCFFRLEQAYQTRKDFLDNYRTLMSIVIAEGPEACPAENVVREEIVGDEDSDGISTIKEENLSDLKDVEIQEDCSEKLESPEDDDLDDDECVPYESIKDELYEQKIPTRKKPKISIPKLSSPISIYEKKKHLRKVWRMDPKKCYICGQLFTSPRELNIHLPQHVDMLPYTCQQCVNGNGPQKELITGLKPLLTHFRQHSGCTPCPKCPFRLFGKEALYNHIQIHHAHEGQKFVCETCGFVMPNKRAHYGHMLRHRYIEEGRFRCEQCDMKFGTNGRLQRHLLLHKEKEFRCQFCPKTFVSNTLLLTHERTHSGGQPSICGTCGEKFTNPTKRWQHAMEAHPEVVQANREAGHYPKHQPKSLICEHAGCGYEASHYQAFWYHVQCHELRYACEQCPKRFPTSQGLKSHRTVHTGERAFPCEQCGKRYSQMVALTKHQQTAHSTATPHTCAECGESFSHRSRLNNHMLKHSEPQHHCEYCNRMFRYKGDWTRHMKQHEEEERNVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400978;
90% Identity: iTF_00400978;
80% Identity: -