Cqui009010.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culex quinquefasciatus
Gene Symbol
Hinfp
Assembly
GCA_015732765.1
Location
NC:211636860-211657910[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 3.6 1e+02 3.4 1.1 2 23 139 161 138 161 0.94
2 28 0.0071 0.2 11.9 0.9 1 21 175 195 175 196 0.93
3 28 1.3 38 4.7 0.4 1 21 203 223 203 228 0.94
4 28 7.6 2.2e+02 2.4 3.2 2 19 281 298 281 303 0.90
5 28 8.2 2.3e+02 2.3 1.6 2 20 313 331 312 332 0.91
6 28 1.3 36 4.8 2.5 2 22 400 420 399 422 0.88
7 28 0.31 8.8 6.8 0.6 1 19 436 454 436 457 0.89
8 28 0.15 4.3 7.7 0.4 3 23 513 535 511 535 0.89
9 28 0.015 0.44 10.9 1.4 3 20 553 570 552 571 0.95
10 28 0.004 0.11 12.7 0.0 2 23 583 604 583 604 0.97
11 28 0.058 1.7 9.0 0.1 2 20 612 630 611 631 0.95
12 28 4.1e-05 0.0012 19.0 3.1 2 21 640 659 639 661 0.93
13 28 1.5e-05 0.00043 20.3 1.9 3 23 669 689 667 689 0.97
14 28 9e-05 0.0026 17.9 0.6 1 23 724 746 724 746 0.98
15 28 0.0001 0.0028 17.7 0.5 1 23 752 774 752 774 0.98
16 28 0.32 9 6.7 0.3 1 20 1241 1260 1241 1262 0.94
17 28 7.5 2.1e+02 2.4 0.7 1 20 1269 1288 1269 1290 0.93
18 28 0.022 0.63 10.4 0.2 2 23 1317 1339 1316 1339 0.91
19 28 0.022 0.63 10.4 0.3 1 20 1349 1368 1349 1370 0.95
20 28 1.2 35 4.9 0.3 1 23 1377 1402 1377 1402 0.94
21 28 0.033 0.94 9.8 0.3 2 21 1456 1475 1455 1476 0.94
22 28 0.081 2.3 8.6 0.1 1 21 1481 1501 1481 1502 0.93
23 28 3.1e-06 8.7e-05 22.5 1.1 1 23 1510 1532 1510 1532 0.99
24 28 0.0078 0.22 11.8 0.1 1 23 1538 1561 1538 1561 0.98
25 28 0.0014 0.041 14.1 2.0 1 23 1567 1589 1567 1589 0.98
26 28 2.1 60 4.1 3.5 1 23 1595 1618 1595 1618 0.89
27 28 0.012 0.35 11.2 1.1 1 23 1624 1646 1624 1646 0.98
28 28 0.05 1.4 9.2 0.9 1 20 1652 1671 1652 1675 0.94

Sequence Information

Coding Sequence
atggaccaGCTGTGCCGCATCTGCATGGGCAGCTTCGAGGGAGACGATCCGGAAGCGATGACCTCCCTGTACAGCGAGCTTGCCAGCGGCAATGAGGTCGTCGCCAACATGATCATCGACTGCGGGGACATTGTGGTCTGTCACGACGACCAACTGCCGGAGTTTGTTTGTGGCGGGTGTTTGGTCCGGTTGGAGGACGCGTTCGCGCTGCGAAAGTTGATCCGGGCGTCGGACGGTGCGCTGCGGGAGATGGCCGCGAATAAGACTCAGAATTTGGTTATGGAGGAGGATGCTGGGGGAGAGCAAGAAGTGGTGCAGAAGGTGCCGACCAAAGTTGTCAACTATCCGAGCGAGGATCAGATTGAGAGTGTTCAGGAAGTCGATTGTTACAAGATTATTCGGTTGAAGGGAATCCGATGCTGTGGATGCAATTCGATGTTTGGTTCGCAGCTGGAGGTGGAACGACACAGTCGGGAGCAGCACGGAAGTGCGGAGGTCAAGCAGGAAGCAGACCGGTTGATTTTCGAATGTCCAACGTGTCATAAGGAGTTTGAGAACAAACTGAAACTGTTGAATCACGCGAAGAACTTCCAATCGAATGAAGTGTATTATTGTACGGTTTGCGACGTCCTGTTCGACATTCGGTACCGTTTGGAGCAGCATCTGAAGCTGAGTAAAGCTCACAGGAATCCTCAGGAGGAACCGCTCAAGATCAGTCTCGATCGGAGGCGATCTTCTGGGAAGAAGAAAGCGACCAGAGAGTTGAAATATCCTGAGCAGGACTTTATCCTAGCAATTGAAGAAACTCAAGAGTATCAGTTGATTCACATTGGAGGAGAACGGTGCTGTGGCTGTGAGCGGATCTTCCAAACCTATCAGGAATTGCAGGAACATTGCAACGAAGTGCATATCCGGTCACCGGAAAATTCTCTCTGCGAGTGTGGTTTGTGCTTTGAAAAGTTTGACCAGATTCAAACTTACAACCGACACACCACGGCAAGAAATTTGAAGGAGCTCTACTACTGCAAGTTTTGCAAGATTGTAATTGACGTTAAATTTCGTTTCGACCAGCATCTCAAATCAAGCCTGGCTCATCAAGCCGCTCGCGAACAAGCCGGAGTTGGGCCTAGTCCTCCGATGGAAGATTTCTCCCGCGCCCTTGAAGCCGGCATCGAAGTGCTTCAAATCGATGGCGTTCGCTGCTGCGGCTGCGACTTTACCTGCGCCAACCGGAACGAACTTGAAGATCACTCGGAAGAAACGCACGGCTTCCAGCGGGTCATCGCCAACTCCATGCAGACCCCTTACGAGTGCGACATCTGCTTTCAACACTTCCCAACCCCACAAACGCTCAAATTCCACACCAATGCCGCCCTCCAAAGCAGCGTCTTCAAGTGCACCCAGTGCGACGTCCAGTCCGAGATCAAACAGCGTCTTCTCCAGCATCTCGCCAGTGGCGTCCACGAGCAAATCCCCAAAAAAGAATCGACCTCCAAGCACCAAACTCAAAAAGTCAAACCCCAGCAACATCTGTGCTGCTTCGTGCGCTGTCCGGCCTCCTTCACCTCCCCAACCGAGCTGCTCTCGCACGTGGAGTCCGACCACGCCGCAAAACGGCGCGAAAACGCCGAAGAGCGCGAACTGGACGGCCCCATCTGCTACGTGTGCCACAAGAGCTTCCGGACGGAGCGCGCCCTGCACGTCCACCAGTTTCCGAAGAATCGCCGCGCCGACTCACGACCGAACGTGTGCGGCGAGTGTGGGGCGGCGTTCCAGACGGCGTCCGGGCTGATCCAGCACGCGAAGAGTCACGCCGCCGAGCGGTGGGAATGGCAGTGTGATGTGTGCGATCGGAGGTGTCCGGACGAGGGGGCGCTGCGCGTGCACCGCGTTTGCCACGAGGAGGAGCGCGCGTGGGAGTGCGACGAGTGCGGGAAGAAGTTTCGGCGGAAGGGGAACTTGAAGGTCCACAAGCGCTGTCACCGGGAGGTCAGCATCTGGGACTGTCCGCACTGCGAGACCAGCTTCAAAACCAAGCAGAGTCTCACGCTGCACATTCGTAGCCACACCGGCGAAAAGCCCTTCCAGTGTCGGTTCTGCGAGAATCGGTACTCGCACACGACGGACCGGCAGCGCCACGAGATGGCCACCCACACGAAGGAACGGCCGCACCGGTGCGAGCAGTGTCCGGCTGCGTTCGTGCGCAAACGGCAGCTGACGATCCACGTGCGGATTCACACCGGCGAGAGGCCGTTCGTGTGCCAGGTTTGTGGCCGAGGGTTCATTCAGGTGAATTATCTGAAGAAGCACTTGACGACCCATGAGAAGGCGGGGAAGAGATTGGTGGAGACGGAGTACATGATCGAGATGCTGCAGGAAGATGAGGAAGAGGAACTTTCGGAGACTGAGCAGAAGGCCTATTACGAGTTGGAGATTGAACAGATGGTCGATGAGGCAGAAGAGGACGACGATGACGAAAATGCCACGTTTGCGCAGCGCGCGTACAATCAGCGGCGTCGCGCCCAACGTAATGCTTATCCTAACCGGGGCGAATACTTTGTGGATGGCGTACGCGATCACGAACGTTCCGGCACCGGCGCCGGCCTTGCTGGCCAGGGCCGAGTCGCCCCACCCGAAGCGCTCCAGCAGCGCGACCACGTCTATTCCGCTGAAATTAGAGAAAAGAGGTGCGAAAACTTGTGCATTCCACCGAACGGACTCGGCACGTTGCTCTGCATGGCCGAGTTTAGGCTCACGGCCCCACGGCAATCGTACGACTGTACGTGCGGATCAACCGTCGCGGCGGCGGAGTACGGCGAACTGTCCACCGTGACGTCGATCTGGTGGTGCGGATGGGTCAGCATTGCCGACGAGTTTATGTCGCGGGCGCGTTGCGGTGAAAAGCGCGTCGTTTCCGTGGGGTCAATGTTGGCCGGCAGTGGGAGGGCTGCGGCGGCCGGGAATCAAATGCCAGCTCAAGGTCTGCTTCAGAATCCGCTCATCCGACCTAATGATCCGAAAGTTCACCGGAACATTCGCTATGATTCGGCGGTCGGCGACAACAGCTTTACTCCGGCCAATGATTGCAAGCGGTGCTTCCCGGAGTCCGCCATGGGAAAACCATCAAGATATACGGATCGCGTGGACACGCTTGCGATGTCCACCCGTAGCGAGGAGGACGGTACCCATTCCGATCGGCCCGTAAAGCGCGATAAGGACGCCATTTGCCGAGTCTGCATGAGCGAAGACCCCATATCCGAGCTGATTTCGTTGTTCCAGATCAACGGCACCGGAGACGAGGTCATTGCCAACATGATCATCGACTGCTGCGAAGTTATGGTTTCGGACGACGATAACATGCCGCAAAACATCTGTGCCGACTGCTTGGACCGGTTGAATCAGGCCTACGAGCTGCGAAAGCAGTGCAAGCGGTCGGACCAGGCGTTACGAGGTTTGGCAGTCGATGAACCTGTTGAAGACGCTCCAGACGATGCGTCCGTAATGGAGCTGGAGGTTGAATATCTAGACGAAGAAGATGAACCTGAAGAGACGAGTCCAAATCTCAAATTCGTGGAGTCTGTTGAGGACTTCCCTTCGCACAGGGTCTACCGCCTGCTGGGAGAACAATGCTGCAACTGTTTCGAGCTATTCCAGGACGTCGATGCGTTGATGGCCCATTGCGATCAGGAGCACGGCCGGGGCACCCCCGGAAAGAGTCACTTCCAGTGTGACGTTTGTCGCGATCCATTCGATAGTCACGCCACGTTGACCAAGCACAAGGAGGTCGCCGCGGGGATGGTCCTGTACCACTGCAAACGCTGCCAGGTTGATCTTCGGAGTGAGCGtgaatttatgaagcacgtcgTTACTTCGGAGCGAGACCACGAGGACGCCGTTGAGACGCTCGACGTCGCGGGCAAGTTTGAAGAGATCTTGATTGTGGGGATGCGCTGCTGCGGATGCGACGAAATCTACGACGATCAGGTTGAGTTGGAGAGACATCGCGAGGACGCACACCGATCCAGTAGGGTTGAGGGAAGTGGGTTCGAGTGCGATGGATGCTACCGGAGATTCAAGATATCGTTCCAACTGGCAAAGCATAGAGCGGAGGCAAAGGCCAAGCAATGGTTTGTTTGCAGCGCCGAAAGCTGCCAGTTTAGAACGGTCTCCCGAAAGAGCATGATCGCTCACATGTTAAGAGATCATGAATCTAGTTCGAAAAAGCCGGACAGCGGCTATGCGTGCTGCGTTCTTCGCTGCTTCGAGACCTTCCAAACGTACGAAGATCTGGAATTTCACGCCGACGAGGCTCACGCTTTGGTACGGCTCCAGCACGAACAGGATCGCAATGCGGAACACAACGTAACGTGCGACATCTGCCACCGAGGCTTCCCGGACGAGCGAACCTACTCGCGCCATCGGAACGACAAAACCCGCAAGCACATCTGTAAAACCTGCGGCGTTCAGTACGCGTTCCGAGCGAACCTGATTGAGCACGAACGCAGCAACTGTGGTCAAGTGGCCCGGTACAAGTGTAGCCAGTGTGACAAAGCGTACAAGACACCGGGTGGCCTCAAAAACCACCGAAAGACCCACAAAGACCAACGATCGTTCGTTTGTGAACTCTGCGGTCGTGCCTTCCTCCGCAAGGGCATCCTCAAAGATCACATGAACACGGTGCACTCGACCGTCCGCGCGTTCCAGTGTTCCCTCTGCCCAAAGTCCTTCACCAGTCGGAACATTTACCGTTCGCATCAGCTGACCCACACCAAGGAAAAGCCCTTCCAGTGCCGGCACTGCGACAAGCGGTACCTCAAGAGCAGCGACCGGAAGATGCACGAGAACCAGGTCCACCTGGGAAATCGACCCTTCCGCTGCCAGTACTGTCCGGCCACGTTTACCCGGGATCGCGAGCGGCGACTGCACGAACGCGTTCACACCAAGGCCAAGCTGTACACGTGCGATGAGTGTGGCGAGGGTTACAACAAGTTTTCCGCCTTCAAGGACCATCGGTGGAAGCAACACGGCCTGGACACGATGCGGGATCTCGGGCCGGCGGCGATGGCAGCCGTGCAGGGACAGGATGACGAAGAGCAGTTTGAGTTCTTGAGTGTTGACCCTGAGGAGGAAGTGGATGACGACGATGagtga
Protein Sequence
MDQLCRICMGSFEGDDPEAMTSLYSELASGNEVVANMIIDCGDIVVCHDDQLPEFVCGGCLVRLEDAFALRKLIRASDGALREMAANKTQNLVMEEDAGGEQEVVQKVPTKVVNYPSEDQIESVQEVDCYKIIRLKGIRCCGCNSMFGSQLEVERHSREQHGSAEVKQEADRLIFECPTCHKEFENKLKLLNHAKNFQSNEVYYCTVCDVLFDIRYRLEQHLKLSKAHRNPQEEPLKISLDRRRSSGKKKATRELKYPEQDFILAIEETQEYQLIHIGGERCCGCERIFQTYQELQEHCNEVHIRSPENSLCECGLCFEKFDQIQTYNRHTTARNLKELYYCKFCKIVIDVKFRFDQHLKSSLAHQAAREQAGVGPSPPMEDFSRALEAGIEVLQIDGVRCCGCDFTCANRNELEDHSEETHGFQRVIANSMQTPYECDICFQHFPTPQTLKFHTNAALQSSVFKCTQCDVQSEIKQRLLQHLASGVHEQIPKKESTSKHQTQKVKPQQHLCCFVRCPASFTSPTELLSHVESDHAAKRRENAEERELDGPICYVCHKSFRTERALHVHQFPKNRRADSRPNVCGECGAAFQTASGLIQHAKSHAAERWEWQCDVCDRRCPDEGALRVHRVCHEEERAWECDECGKKFRRKGNLKVHKRCHREVSIWDCPHCETSFKTKQSLTLHIRSHTGEKPFQCRFCENRYSHTTDRQRHEMATHTKERPHRCEQCPAAFVRKRQLTIHVRIHTGERPFVCQVCGRGFIQVNYLKKHLTTHEKAGKRLVETEYMIEMLQEDEEEELSETEQKAYYELEIEQMVDEAEEDDDDENATFAQRAYNQRRRAQRNAYPNRGEYFVDGVRDHERSGTGAGLAGQGRVAPPEALQQRDHVYSAEIREKRCENLCIPPNGLGTLLCMAEFRLTAPRQSYDCTCGSTVAAAEYGELSTVTSIWWCGWVSIADEFMSRARCGEKRVVSVGSMLAGSGRAAAAGNQMPAQGLLQNPLIRPNDPKVHRNIRYDSAVGDNSFTPANDCKRCFPESAMGKPSRYTDRVDTLAMSTRSEEDGTHSDRPVKRDKDAICRVCMSEDPISELISLFQINGTGDEVIANMIIDCCEVMVSDDDNMPQNICADCLDRLNQAYELRKQCKRSDQALRGLAVDEPVEDAPDDASVMELEVEYLDEEDEPEETSPNLKFVESVEDFPSHRVYRLLGEQCCNCFELFQDVDALMAHCDQEHGRGTPGKSHFQCDVCRDPFDSHATLTKHKEVAAGMVLYHCKRCQVDLRSEREFMKHVVTSERDHEDAVETLDVAGKFEEILIVGMRCCGCDEIYDDQVELERHREDAHRSSRVEGSGFECDGCYRRFKISFQLAKHRAEAKAKQWFVCSAESCQFRTVSRKSMIAHMLRDHESSSKKPDSGYACCVLRCFETFQTYEDLEFHADEAHALVRLQHEQDRNAEHNVTCDICHRGFPDERTYSRHRNDKTRKHICKTCGVQYAFRANLIEHERSNCGQVARYKCSQCDKAYKTPGGLKNHRKTHKDQRSFVCELCGRAFLRKGILKDHMNTVHSTVRAFQCSLCPKSFTSRNIYRSHQLTHTKEKPFQCRHCDKRYLKSSDRKMHENQVHLGNRPFRCQYCPATFTRDRERRLHERVHTKAKLYTCDECGEGYNKFSAFKDHRWKQHGLDTMRDLGPAAMAAVQGQDDEEQFEFLSVDPEEEVDDDDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-