Cqui008813.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culex quinquefasciatus
Gene Symbol
ZNF592
Assembly
GCA_015732765.1
Location
NC:205181781-205194487[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.076 2.2 8.7 0.5 6 23 2 19 1 19 0.96
2 16 0.042 1.2 9.5 4.2 1 20 27 46 27 48 0.93
3 16 5.3e-06 0.00015 21.7 2.6 1 23 63 85 63 85 0.98
4 16 2.3e-05 0.00067 19.7 3.5 1 23 93 116 93 116 0.97
5 16 0.015 0.44 10.9 3.8 1 23 135 157 135 157 0.98
6 16 0.00036 0.01 16.0 1.5 3 23 357 377 355 377 0.94
7 16 0.00049 0.014 15.6 1.1 1 23 401 423 401 423 0.98
8 16 0.00024 0.0067 16.6 0.3 2 23 432 453 431 453 0.97
9 16 0.02 0.58 10.5 2.2 1 23 497 519 497 519 0.98
10 16 0.11 3.2 8.2 4.7 1 23 537 560 537 560 0.96
11 16 5.7e-06 0.00016 21.7 0.5 2 23 582 603 581 603 0.98
12 16 0.006 0.17 12.1 0.4 1 23 611 633 611 633 0.98
13 16 0.00015 0.0043 17.2 0.5 1 23 644 666 644 666 0.97
14 16 0.0013 0.036 14.3 0.4 1 23 675 698 675 698 0.97
15 16 1.9e-06 5.3e-05 23.2 0.6 2 23 728 749 727 749 0.97
16 16 0.82 23 5.4 7.2 1 23 757 779 757 779 0.96

Sequence Information

Coding Sequence
ATGTGCAACAAACCGTGCTACTCGAAGGATTCTTACGAACAGCACTTGCAGTCGCACATGCATATCGAAAATAAGACTTTCCAGTGTAAAATTTGTGAGAAAtgCTTTGGATCGGAAAACTGTCTCAAGGGTCACACAACTCGGCAAGAGTGCGAGAAAAAGGTGATGTTGGGCGCGAATGGCGTTTACAATTGTTTCGAGTGCAGCAAAACGTTTTCGCAGCAAATTTTTCTGATCCGACACATGCGTCGGCACGCCCACATCATCAACGGTACCTACAAGTGTGACCTCTGTGGGAAGcactttgcCTCCAACAAAGAACTCCAAACCCACACGAAAAACTTCCACGAATTGCGGAAACCCTCGGCGGTGGATCTTATCCTGACCGACGAGCGGGGCCACTTCAAGTGTCCCAAGTGTGACACGACGTACGAGAATCGTCAGTCCTGCCTGAAGCACATCCTGCGCCACGAGGCGCTCGAAACGGAACGTCGACGAAACTCTATCATGGACGGAACATCAAGCTCGCCGGGGCGTCCCAAGCGGAATGTGACCATACGAGATTACAGCCTGCTGTTCAAGCGACCACCGAACATCCAGAAGACCAAGAGTGCTCGTGTTCCGAGCAGCGAATTCTGGACGAATCGGGAAGTTGCAGTCAAAGAGGAAGTGCCATTTGTAGTCTACGAAACGGATGCCAATCTGAGCGAGGAAATCGATATCAAACCGGAACTCGAAGACGGTTCCAGTGGTGCCGAGGTTGATGCGACATCGTTTTCCGAAGCTATCGTAAAGGACGAACTTATCATAGAGGATGTCTTGGATGCCGTGGAGGAGGAGGATGTAGAGTGGGTGGTGGAAGAAGGTCAGGTTGAGGACCGTCCAGCTCAGGACGATGTTAGGCTTGAAAGCAACGTTTCATGTGGGAAGGAACGTGTGGATCTTAAAAGGCGTGGTCGACCgcctaaatcgaaaaaaatagtgaaaaggGTTAAAAAGTCAGAGCTCGGGAAATCCGATGCCGATATTTTGATCTCCAGCGGGCGCAAGTTCAAGCGAAAACATCTGTGCGAAATATGCGGAAGAAAGTTTACCAACAGGAAGGGTCTCTCCGTTCATAAGCAGGCCCACGCAAAGCGACAGCCTTCGGTGGTGGTCACAGAACCGCCGCAGGTTCCCACGCCGGATAAAAGTGGCCTCTTCCAGTGTTCCGAATGTTCGAAAAGGCTGACGTCGCGCGAAAATTACGTTGCCCATTACAAGTGGCACATGTATCTGAAACAGATCGGCATTGAGTGCAACGTCTGCGGTGAGttgtTTGAATTCCAGAATACACTCAAAATGCATTTGAGAACACATGTGAAAGACATTGACTCAAGCGTGAAGGTTGTCGAGGATGAAAACGGATTGTTCAGATGTTCCGAGTGCATGAGCACTCACGTTAGTCGAGTCAACTGTATCAACCATATCCGGACCCATGCCAACAACTTCCGGTGTGCAACCTGTGGAAAGTTCTGGGAGTCGGAGAAGCATCTTCGGAAGCACGAGAAGATTCACGAGAGAACACTCGCCAATTCCATCGTAGTCGAAACGAACGAGAACGGATTGTTCAAGTGCAGCGAGTGCCCCAAAGTCTACATCCAGCGAACTCTATGCGTCAGCCATATGCATCGCTTCCATGGGATAAAACCTTTTAAAATCCAGACCGAGCCAACTCCTCCGGAAGGTGCCGAAACATTCAACAAATGTCCAGAATGTAGCAAAACATTTACGAATCCAGTCGCCTACGATCAGCACATGCGAAGACATCGAAACGTCAGCGAAGGTCGCTTCAAGTGCAAGGAATGCGGACAGAACATGCCAACGAAGTCTATGCTCGGCAGCCACACCTTAATGCACCGGCGCCTCCGCCAAAATCCGGAAGGAAATTTCACCTGTGTCAAGTGCGACAGAGACTTTCCCAGCTGGAATTCATTGTCTCGTCATGTTACATCGCACAAAAGGATAACCAAAAATTGTCTCTACAAGTGCAAGATGTGTGAAATgACCTACGTTTCTCTGCAAGCCCTGGTCAAGCACCGATTGGTCAGCCATCCTGGAGACGATTTCGATCGGGAATCCACGATCGTAACCGAGTTGCCAGCGGAGGACGGCCTGAGTACGTCCGCCACGGTTGAGCTAAAATGTCCCGAGTGCGACAAAACCTACACGGACCGGGGGAAACTGCGAGTTCACCTAAACAAGCACAACAACATTAGGGCTGGGCGGTTCCAGTGTAAGCACTGTGGACGGAAGCACGGGACGCATGCAGAACTCAAGAAACATGAATTTAGTCATGAGATGATGCGGacgaaaagaaaatga
Protein Sequence
MCNKPCYSKDSYEQHLQSHMHIENKTFQCKICEKCFGSENCLKGHTTRQECEKKVMLGANGVYNCFECSKTFSQQIFLIRHMRRHAHIINGTYKCDLCGKHFASNKELQTHTKNFHELRKPSAVDLILTDERGHFKCPKCDTTYENRQSCLKHILRHEALETERRRNSIMDGTSSSPGRPKRNVTIRDYSLLFKRPPNIQKTKSARVPSSEFWTNREVAVKEEVPFVVYETDANLSEEIDIKPELEDGSSGAEVDATSFSEAIVKDELIIEDVLDAVEEEDVEWVVEEGQVEDRPAQDDVRLESNVSCGKERVDLKRRGRPPKSKKIVKRVKKSELGKSDADILISSGRKFKRKHLCEICGRKFTNRKGLSVHKQAHAKRQPSVVVTEPPQVPTPDKSGLFQCSECSKRLTSRENYVAHYKWHMYLKQIGIECNVCGELFEFQNTLKMHLRTHVKDIDSSVKVVEDENGLFRCSECMSTHVSRVNCINHIRTHANNFRCATCGKFWESEKHLRKHEKIHERTLANSIVVETNENGLFKCSECPKVYIQRTLCVSHMHRFHGIKPFKIQTEPTPPEGAETFNKCPECSKTFTNPVAYDQHMRRHRNVSEGRFKCKECGQNMPTKSMLGSHTLMHRRLRQNPEGNFTCVKCDRDFPSWNSLSRHVTSHKRITKNCLYKCKMCEMTYVSLQALVKHRLVSHPGDDFDRESTIVTELPAEDGLSTSATVELKCPECDKTYTDRGKLRVHLNKHNNIRAGRFQCKHCGRKHGTHAELKKHEFSHEMMRTKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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