Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: ken
Assembly: GCA_015732765.1
Location: NC:25039170-25043005[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5e-06 4.3e-05 23.5 0.2 1 23 230 252 230 252 0.96

2 17 0.0006 0.017 15.3 0.9 1 21 256 276 256 277 0.94

3 17 0.012 0.34 11.2 0.2 2 23 291 313 290 313 0.92

4 17 0.00049 0.014 15.6 0.8 2 23 386 407 385 407 0.94

5 17 0.0054 0.15 12.3 3.2 1 23 413 436 413 436 0.96

6 17 0.025 0.71 10.2 3.0 2 23 449 471 448 471 0.96

7 17 0.0033 0.093 13.0 0.4 3 23 507 527 505 528 0.94

8 17 8.7e-06 0.00025 21.1 2.2 1 23 570 592 570 592 0.98

9 17 0.0038 0.11 12.8 3.0 1 23 598 621 598 621 0.95

10 17 0.041 1.2 9.5 0.2 2 23 633 655 632 655 0.95

11 17 0.00021 0.006 16.7 2.1 1 23 751 773 751 773 0.96

12 17 0.00042 0.012 15.8 0.1 1 23 779 802 779 802 0.95

13 17 0.44 13 6.3 0.9 1 23 813 836 813 836 0.94

14 17 0.012 0.34 11.2 1.9 2 23 958 979 957 979 0.94

15 17 5.9e-06 0.00017 21.6 4.4 1 23 1009 1031 1009 1031 0.98

16 17 0.019 0.55 10.5 1.0 1 23 1037 1060 1037 1060 0.95

17 17 0.64 18 5.8 6.5 1 23 1073 1096 1073 1096 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5e-06	4.3e-05	23.5	0.2	1	23	230	252	230	252	0.96
2	17	0.0006	0.017	15.3	0.9	1	21	256	276	256	277	0.94
3	17	0.012	0.34	11.2	0.2	2	23	291	313	290	313	0.92
4	17	0.00049	0.014	15.6	0.8	2	23	386	407	385	407	0.94
5	17	0.0054	0.15	12.3	3.2	1	23	413	436	413	436	0.96
6	17	0.025	0.71	10.2	3.0	2	23	449	471	448	471	0.96
7	17	0.0033	0.093	13.0	0.4	3	23	507	527	505	528	0.94
8	17	8.7e-06	0.00025	21.1	2.2	1	23	570	592	570	592	0.98
9	17	0.0038	0.11	12.8	3.0	1	23	598	621	598	621	0.95
10	17	0.041	1.2	9.5	0.2	2	23	633	655	632	655	0.95
11	17	0.00021	0.006	16.7	2.1	1	23	751	773	751	773	0.96
12	17	0.00042	0.012	15.8	0.1	1	23	779	802	779	802	0.95
13	17	0.44	13	6.3	0.9	1	23	813	836	813	836	0.94
14	17	0.012	0.34	11.2	1.9	2	23	958	979	957	979	0.94
15	17	5.9e-06	0.00017	21.6	4.4	1	23	1009	1031	1009	1031	0.98
16	17	0.019	0.55	10.5	1.0	1	23	1037	1060	1037	1060	0.95
17	17	0.64	18	5.8	6.5	1	23	1073	1096	1073	1096	0.96

Sequence Information

Coding Sequence: ATGGAGTACGGTGTGCCCGGCGCAGAGGATTTGCTCGAGGTGCCAAATGGCGACCCGTCCTCGTACTGCCGGCTGTGTCTGTCGGACCGGTCCCAGGAGCTCGAGGAGTTGTTTCCGGTGGGACAGGGTCCTCGGTTGGAGACGATCGATCGGATTGCCCAGTGCACGGGGATTCAGATTAGCCAGGATGAGGACTTTCCGTCGGCGGTCTGCTGGATGTGCTCGATGTCGCTGGAGGAGTTTCAGTGGTTCCGGGAGCGATGCCGGCGGCATGATGTGCTGATTCGACGGAAGCGCAAGGAGCTGCTGTTGCACTCCGAGTACGACGTGTCCATCATGGACGATCCGGACTTGGAAGGTGGGTACATGGATGAAGGAGAGCAGGAGCCTCCACCTCCTCCGATGTTGCAGATTACGTCGGTTCAGGAGCGATTCGACGCGGGAAGACAGTCGAGTCTGAGCTTGCTGGAACCTACGACGTATCAGCCACCGGAGGAAGATCCAAACCAGGACGATTGCGATGATTTTGACGACGCCGACGAGGAGCTGCAAGATGTGAAGCCGGACCACGAGATGTTGGACGCTTTCGCACAGCAGTTTCGGGCAGCTACGAACGGTGAATCGGAACAGCGAAGTGAATCCGTCATGACTGGGACCACCTCGTCTAACGTAAACGATGATAAAAAGTACCAATGTCCGGATTGTGGCAAACAGTTTAAAAGCAGAGGTAGCCTGACCGAGCATGTTGTTGTACACACGAGCAAGTTCTCCTGCAAGGAGTGTGGCACCGGGTTTTATCGTATCAAAACGCTTAGAAAGCACCAGGAAAAGTACCTCAAGGACTCTTCTGCTCCTGCTCCGCTGCGTCTCAAGTGCGACTATTGTCCTCGGATTTTCCCGCGGCAAGCGGATCGCGTCCAACATTACGTGCGCTCCCACGCCCAGCTGTACAGGTCGGGCAAAAAAGCTCCACCGCGCAAGACAAGTGCTTCCACTCAACTCGAACGTCCTCCCAGTTCCGTCAAGCCGGCAGctccagcgactccaccggctCAGCTCAGTTGCTCGCTCTGCGTAACGCCCCTAAACTTCCCCAACACGAACGAACTGGAAGACCACATCGAAAAGTTGCACACCGACAAAGACGGCGTGCTGATCTGTCTGATGTGTCCAAAAACGTTCAAATCTCGAACCACCCTCAAAATGCATGTCCTGAACCACCAGGGCAAGCTCCCGCACGAGTGCAATGATTGTGGATCCCGCTTCGATCGCAAGCTCTACCTGGACCGGCATCGCCAACGCTACCACAACGGGGCCAACTCCCCGGCCATCATTACTCGACTCCGCTGCAAGCACTGTCCGCGAACGTTTCTCGAGGCGCACCAACTGGCAACGCACACGCGAAGTGTCCACGCCTCGAACGGCACCACCATCAAGCGCGAAAAGCTCACGCCCGATCCCACCAAAACGGAAGCAGCTCCAACGCCACCACCTTCCCGCCCAGAACTCAGCTTCGGGTGTCTCCAGTGTGGCAAAGACTTCCCCTCGCCGGCGCTGCTCCGCGAACACACCGAGAACCATCACCCAGCTAAAAAGCCCACCTTCTACGAGGTCAAACCCATCATCATCAAAACGGAACCGGGCCTCGAGCCGGAACAACAACCAACCCCCATCAAGAAACGCACGCCCAAACCCGGCGGCCTGCCCCACAAGTGTCCGCGCTGTCCGAAAACCTTCTCGACCGGCTTCAACCTAAAGGAGCACCTGCGCATCCACACCGGCAAGCTCAAGTTCCGCTGCGAGCTGTGCAGCATGAGCTTCCACCGGGAAAAGTTCCTCCAGAAGCACATGCTGGCCAATCACGGACCGGACGGGACCGTCCGCAAGCCGGTCATCAGCTGCAAGGTGTGCGGACGAGGCTTCCTACGCGGGTTCGATCTGACAAAGCACGAAAAAATGGCCCACGGAATGCACGGCGGATGTGACGACGGCGACGGGGAACTCCAAAAAAATGGCGAGGACGGCGAGAACTTCGAAGAAGTGATGCCAGAGGACGTTAAGATACGGGACGTCGTTGTCACCCTGGAACGCCTTCCCGACGAAGTTCTGGAAACGGTGGATGTATCTTAcggcgacgatgatgatgacgaagaagaagaagaagcagaagCGGAAGCGGAAACAGCTCAAACCGACGATCAAGAAGACTCCAAATCCGAACAGACCGTCCCTCGGATGAACATCACGCTGCACCGCTGTCCAAAGTGTCTGCGCGTGTTCAAGTCCCGCGCGATGCTTAGCCGGCACATGGTGTACCACCAGTCGGAGTTGCCGTTCCCCTGTGACGAGTGTGGCGTCCAGTTTGCCCGTAAGCCCCTGCTGCAGGCCCACAAGGAGCGGTACCACTCGGAGGATGCGCCGGCCATCGGCGAGCGGTTCAGTTGCAACTACTGCTCGCGTATCTTCCTGCGAGAGCGCGACAGAATCACCCACGTGAGGAACGTCCACGTCATGGAGCGAACCTACGGCATCCGGGAGGAGGAGGGCACTCCAGAGTTGAAAAAGTCCAAGCTGAAAAAGAAACGCAAGGACTACCTCTGCCTGCTGTGCAACGAGCGTTTCGAGGGGGAAAGATCCTGCCAACGGCACCTGTACCAAGTACATCCAGCCGAATCTCAAGCACCCGCAGCTAAAACAACCTCGGAATCACCTGCCACAGTCACTCCCAAGGAGGAACCCGCAGAAGATTCCACAGATCCACAGACGTCATCCGAAGATGTCAAACCTTCCAGCGCAAGCTCGCCAGCGCCTACTCCGACGACCACAACAACCCCAGCACCCACCACTCGCGTCAAGCCATACAAACTGTGCCGCTGTCAGATTTGTTCGGCCATCTTCAAAAACGAAGAAAACTGGAAGGCCCACATCCACGACCACCCGAAACACTGCCGGCCGCACCACTGCGAAGCGTGCCTGATCACGCGCAAGGCCGGTCGCACCAACAAAAAGGTCACCTCCGTCGGCTTCAAGTGCCAGCACTGTGCAAAGGTGTTCAAACGGAAGGCCTCACTGCGGAACCACCAGCGGCTGCACAGCTCCGAACTGCGCTTCCCGTGCGACGAGTGTCCCATGAAGTACGACCGCTTCCGGCTGCTGCAGACTCACAAGGAAAAGTACCACTCGGAGGATTCGGTGCAGCAAGCGCCGCTGGAAACCTTCCAGTGTGAGCATTGCGATCGGATGTTTCTGCGTCTGTGCGACCGGAACCATCATATGGAGCGGGTCCACGGGCCGGAGGGATCCTACGAGGGAGGAGAGGCCGGACAGGCCACCAGCACatga
Protein Sequence: MEYGVPGAEDLLEVPNGDPSSYCRLCLSDRSQELEELFPVGQGPRLETIDRIAQCTGIQISQDEDFPSAVCWMCSMSLEEFQWFRERCRRHDVLIRRKRKELLLHSEYDVSIMDDPDLEGGYMDEGEQEPPPPPMLQITSVQERFDAGRQSSLSLLEPTTYQPPEEDPNQDDCDDFDDADEELQDVKPDHEMLDAFAQQFRAATNGESEQRSESVMTGTTSSNVNDDKKYQCPDCGKQFKSRGSLTEHVVVHTSKFSCKECGTGFYRIKTLRKHQEKYLKDSSAPAPLRLKCDYCPRIFPRQADRVQHYVRSHAQLYRSGKKAPPRKTSASTQLERPPSSVKPAAPATPPAQLSCSLCVTPLNFPNTNELEDHIEKLHTDKDGVLICLMCPKTFKSRTTLKMHVLNHQGKLPHECNDCGSRFDRKLYLDRHRQRYHNGANSPAIITRLRCKHCPRTFLEAHQLATHTRSVHASNGTTIKREKLTPDPTKTEAAPTPPPSRPELSFGCLQCGKDFPSPALLREHTENHHPAKKPTFYEVKPIIIKTEPGLEPEQQPTPIKKRTPKPGGLPHKCPRCPKTFSTGFNLKEHLRIHTGKLKFRCELCSMSFHREKFLQKHMLANHGPDGTVRKPVISCKVCGRGFLRGFDLTKHEKMAHGMHGGCDDGDGELQKNGEDGENFEEVMPEDVKIRDVVVTLERLPDEVLETVDVSYGDDDDDEEEEEAEAEAETAQTDDQEDSKSEQTVPRMNITLHRCPKCLRVFKSRAMLSRHMVYHQSELPFPCDECGVQFARKPLLQAHKERYHSEDAPAIGERFSCNYCSRIFLRERDRITHVRNVHVMERTYGIREEEGTPELKKSKLKKKRKDYLCLLCNERFEGERSCQRHLYQVHPAESQAPAAKTTSESPATVTPKEEPAEDSTDPQTSSEDVKPSSASSPAPTPTTTTTPAPTTRVKPYKLCRCQICSAIFKNEENWKAHIHDHPKHCRPHHCEACLITRKAGRTNKKVTSVGFKCQHCAKVFKRKASLRNHQRLHSSELRFPCDECPMKYDRFRLLQTHKEKYHSEDSVQQAPLETFQCEHCDRMFLRLCDRNHHMERVHGPEGSYEGGEAGQATST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400840;
90% Identity: iTF_00400840;
80% Identity: -