Cqui008809.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culex quinquefasciatus
Gene Symbol
-
Assembly
GCA_015732765.1
Location
NC:205152615-205170642[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.06 1.7 9.0 3.1 2 23 70 91 69 91 0.95
2 29 0.4 11 6.4 2.2 1 21 99 119 99 120 0.92
3 29 0.58 17 5.9 1.7 2 23 131 152 130 152 0.85
4 29 0.00037 0.01 16.0 2.5 1 23 160 183 160 183 0.96
5 29 3.4e-05 0.00097 19.2 1.6 1 23 213 235 213 235 0.98
6 29 2.5e-05 0.00071 19.6 1.2 1 20 243 262 243 265 0.91
7 29 0.0053 0.15 12.3 0.9 1 23 293 315 293 315 0.98
8 29 8.6e-05 0.0025 17.9 0.5 2 23 324 345 323 345 0.97
9 29 9.4e-07 2.7e-05 24.1 3.6 1 23 375 397 375 397 0.99
10 29 0.043 1.2 9.4 0.7 1 23 405 427 405 427 0.97
11 29 0.066 1.9 8.9 0.4 1 23 454 476 454 476 0.97
12 29 0.02 0.58 10.5 4.5 1 23 484 506 484 506 0.99
13 29 1e-05 0.00029 20.8 0.4 1 23 522 544 522 544 0.98
14 29 0.0005 0.014 15.5 0.3 1 23 552 574 552 574 0.98
15 29 0.001 0.03 14.5 2.2 1 23 583 605 583 605 0.99
16 29 1.4 41 4.7 2.8 1 23 1004 1026 1004 1026 0.98
17 29 9e-05 0.0026 17.9 0.2 1 23 1049 1071 1049 1071 0.98
18 29 0.00081 0.023 14.9 2.5 3 23 1271 1291 1269 1291 0.96
19 29 2.8e-06 8.1e-05 22.6 1.5 1 23 1299 1322 1299 1322 0.95
20 29 0.00019 0.0055 16.8 2.4 1 23 1355 1377 1355 1377 0.99
21 29 7e-06 0.0002 21.4 0.2 1 23 1385 1408 1385 1408 0.98
22 29 2 58 4.2 6.0 1 23 1427 1449 1427 1449 0.97
23 29 0.00037 0.011 16.0 0.8 1 23 1458 1480 1458 1480 0.94
24 29 3.3e-05 0.00093 19.3 1.3 2 23 1494 1515 1493 1515 0.98
25 29 0.016 0.46 10.8 0.3 1 23 1523 1545 1523 1545 0.94
26 29 0.00041 0.012 15.8 0.2 1 23 1568 1590 1568 1590 0.98
27 29 5.4e-05 0.0015 18.6 2.0 1 23 1598 1620 1598 1620 0.99
28 29 7.8e-05 0.0022 18.1 4.1 1 23 1636 1658 1636 1658 0.97
29 29 0.51 15 6.1 0.2 1 23 1666 1688 1666 1688 0.96

Sequence Information

Coding Sequence
ATGGCCGAATCTAAACCATTTTCTGCGGTGGTCAAACAGGAACACGTTGACGTGGAAGATCCAAGTGCATTCTGTTACGAAACCCTAGTAAAGGAAGAACTTATCATCGAGGACGAGCTCGAGCCCTCACCCGAAAAAGATGATGGTCAAGATCAAACtgaagttttgcaaaatcaATCTGCAGGCCAGCCGAGCAACACAGAATGGCACTGTGAAAAATGTAACCAATCGTACCCTACCTCTAAATCATTCAGTGCCCACAAGACTCGTCATAAAGCGTTGGAAACTGGCCGGTTCGCGTGTCAACAGTGCGAAAGGCGTTTTCCAGACAACAACGCACAACGCCGTCACAAGTGCAAGGGTAAGGCAACGGGGAATCCCGTATCCTGGGTTTGCGAAGAGTGCAACAGAACATTCCCAAATCGGCATATATTTTATTTGCACAAATACAGGCATAGAGTTGTGAAGGAAGCGAGATACAGGTGTGAACTGTGCGATAAGTGTTTTTCGGACAAAAATGCGCAAACGAAACATGTACAAAATGTGCACAGAGAGAAAAGAAGTATCAAAGCAATACAGTTGAAATCGGAAGATGAACGGGACTCCAAAGCTGAGGAAAAGGACGAAAATGGCCTCTTCAAGTGTCCGGACTGCGATAAGCGCTTCGAGGTCCGCAACAGTTACACTTCACACCTTCGGCAGCACCTTGCTATGAAGCAAGAACGGTACAAGTGCAAGATATGCGAGTTGAGTTTCAGAACAAGCTCCGAGCTCAAGAGGCATGATCGAGCTCATGAGAACCACAAATCCAAATTGTCAAATGACCCGTTTGCCTCGATATGTCCCGAAGCGACCATGAAGGAGGAAAACGGCATATTCAAGTGTTCAGCGTGTGAGAAGACCTTTGAACAACGGCGTGCGGCTTTGCGTCATCTCATGAGACATGGTTATGTAAAGCGAGACAGGGTTCAGTGCAAATTGTGCCCAATGACGTTCGTTAACAAAACGTACCTGGAAAAACATCAAATGGAACACGAATCTTCGAAGGACGTTTCTGCAAGTGGTTCAAGCAGCGAGAAGGAATCAGATTCGGACGATTTGTCGCAAGATGGAGCCAGCGAATTCAAATGTACCGATTGCAACAAAACATTCCGGGAAAAGCGTCTGTTGAATCGGCATATTCGGAGGCACGAAGCGATCAAAGAGAGCAAATTTCCGTGCAAGCTGTGCGATGTGCGCTGCGGAAGCAAACGAGAGCTGATAACACACGAGGAAATGCACGCTAGGAAGCAACAAACAACGATTGTTTCTACAGAGAAAGTGCCCCCAATAATCTTGGAAAGAAACAACCACACCGTCTACAAGTGTCCTGACTGCGCCTTAATATTCACCAAACAGCGGGTTTATTCCACTCATGCTCTTAGGCACGTTAACGTCAAAAACGGAACCTTCAAGTGTGAAACGTGCGGCGTGTGCTGTCCAACCAGAAGGAACCAGCTGGAACACATACGGAAACATCGAGCGGGAAAGGTTATCGCACCGACGCAGCAGGACAATTTTCCTTTCGTGTGTCCCGAATGCGGGAAGAAGTTTCCCCTAAGAAAATACCTTATCCAACACGTCAGGCGACATGAGGCCGTGGAAAGTGGCACCTTTCAGTGCAAGATCTGTGCCAAGTTCTTTAGCACTGGTGTAGAACTGGCTAGACACGAGAAGATCCATGAAGGCAAGGACAAGCTGGAAAAGTTTAAGTGTTCCGAGTGTGGCTTCATTTGTGCTTCACGGTCGTCGTTTGTGTGGCATCTTAAGAGGCACGAGGCCATAAGAAGCGGGAAGTTCGAGTGCAAAGTGTGTGGGAAGCTGAGGGCTGTAATGTCGCCGTGCACAACGaagccaagttacaagctaacTCCGTTTGGGATCAAATTGCTGTGTTCCTCCGAGGAGCGTTTTGAGACCGCGCGGGCCCACTTGATTGCGAACAAAGTGGAGTTCTACACCCACGAGAAACGAAGCGAGCGGCAACTCCGCGTCGTCGTCCGAGGACTTCCGTCGGCTTCACCTGAATTCGTCAAGAAGAACCTCAAGGAATCGCAAAACCTGGATGCTGTGGAGGTGCACGCCATCAAGAGAAAGGGAGAGTTCGCCTCGTCAGAGGAAACCCCCTACATTGTTACTGAAGGCGGTTGTGGCGTCCATCTGGTCCATCGACAAGTCATATCTGGCGGAGAGCGCGAACAGATATCGCAGGGAACTGTGACGTACGACTGGCGAGTAGGTTTCGTCATAGTCTTCCCCTTTCGCTGCGAAAATCCTTTCACAACCAACCGCGCCTTGTGCCGATCTACATTACCACTCGCGTCGTGCTTGGTCTTGAAGACCCACCGACACTTGATGGCCTTTCTGCCCTTCGGTAGTTCCGTCAGCGTCCAGGTGTCGTTCGCCATCAGCGCCTCGTGCTCGTCAAACATGGCCTTCTTCCAGCTTTCAGAGTCCTCTCGAGACAGCGCATCCTTGTGGGTCAAGGGATCGCCGTCGACTGCCAGACTCCTGGCTGTGGCCACCACGCAGCTCGTGTCGCGACTCGGCGGGACCGGGTCATCGGATTCCTCCGACGAGTTGTCCTCGCTGGCGTCGTCGTCGCTGGTATCGGTTGATTCGACCTCCTGTAAGGGATTGGGACGCGGCAAACCTCTGAGCGAAACATGGAAATCATCGTACTTGCCTGGAAGTATGTGCTCCCGACCGCTGCGCCTCAACTCCGGTGACAACGGAGGATTTGAAGATGATTGCGGTGGGAGCACGGAGGTCACGTCGGTCACTGAGCCAGCTGTTTCCTCGAACCCGAGAAACTCGTCCTCGCTGTTGTCGACATCCGGGACACGGTCCGTGTCGGGATTCTCCAGCTCGTTCTCGGCGGCGTCGTCGATTTCCACAAAGCGATTCGGCGAACCACTTGCTGTCGGCGGCACACACCTTAGAAGGCACGCGGCCATGAAGGAAGGCAAATATCAATGCAAGATTTGCAGTATGCGACACGCATCTGACCGCGAGTTGAAAATTCACACAAAGAAGCACGAAATGAACGTGGAAATGCCGTCAGTTCCACCTCCAGTTATAATTGTAAGAAATGATCACAGTGCATTCCAATGTCCCGAGTGCGGTATGGTGTTCACCGTCCGGCGTGCCTACAACAACCATGCGCAAAGACATATAAATATACGAAATGGCATGTACAAGTGCGATATTTGCGAAAAGATGGCCAAAATCACGGTGAAAACGGAACCCGATTACGAAATGCACTCCACCCTGGAGGATCAGCAAACGCAGCAGGAGGGATCTGAGGATATGACTTCTTTCTGTTACGAAACTGTGGTCAAGGAGGAAGTTATCCTGGAAGACGAATTTATTTCACCAGAAGAGGAGAGCGCCAGAGAGTGTAATAAGGCATTTGCCACGGAAAACAAAAGCCACATCAAACGAGCTCACGAGAAACATGCACAGAAGAGCTCGGAGGTTTCCGTGCTGGAAGAGGATGGAGTCTTCATCTGCAGTAAATGTAACAAAACGCACGAGGCCATGAAAGAAGGCAAATATCAATGCAAGATTTGCAGTATGATGGCCGAAATTACGGTGAAAACGGAGCCCGGTTACGAAATGCACTCCTCCCTGGAGGATCAGCAAACGCAGCAGGAGGAATCTAAGGCCACGACTTCTTTCTGTTACGAAACTGTGACGAAGGAAGAAGTAATACTGGAAGACGAATTTGTTTCACCAGAAGAGGAGAGCGCAACCAAGCAAGATATGTTTTGCGAAGAATGCAACAAATCGTTCACAAATCGAGCGCTTTTCAGAACTCACAAGTATAAACATAAGGTTGTCAAAGAGGGAAAGTATACCTGCCAAATCTGCGATAAGTGCTTTAGAGACAAATATGCTCTGACCATTCACCTGCAGGGCATTCATCTAGTGTCCAAGCTcactaaaaacaaaaagaacGAAGAATTGAACGAACCGGATGTTAAACAGTTTCCAAAAACCATCACGAACGAACATGGACAATTCAAATGCACCGAGTGTGACGAGAGATTTGAGTTCCAGTACCTGCAGCAGCGACACATTCGAAGGCATTCGGCATTGAAGCAAGGGTTGTACAAGTGCGAAGAGTGCAATAAGGCCTTTGCTACGCCCAGTGAAATCAAAAGTCACCTCAAACGAGCTCACGAGAAACATGCACAGAAGAGTTCGGAAGTTTCCGTGCAGGAAGAGGATGGAGTGTTTATCTGCAGTAAATGTAACAGGAAGTTTGAGGAGCGACACTTGTGCCAGCAACATATTTTGAGACATTTGGCACTGATGAAGGAACGGGTTTTCACTTGCTCCAAGTGTCCTAAGaaattcatatcagaaaaatatctcgaaaaacaTGAAGCATGGCACGAAGTTAAAGCAGCTCGTGTCGAACAATGTGAAATGGTGAAATGCGACGAGTGTAACAGGGAATTCCGAAATAAGCTCCTGTTGTCTCGACATATTCGCAGGCACAAGCTCATAAAAGAAGGCAAATTCCTTTGCGAGATTTGTGACGCGCGATACACAGCCAAGCGGCAGTTGATGAAACACGCAGAGAAGCATAAGAAGAATCCGTACCTGCCGTCATTCGAGCCTCCCGTTGTAATTGAACGGAACAACCACAGCGCGTTCAAGTGTCCGGACTGTGGCATGGTATTCACCGTTCGACGTGCGTATGACAATCATGCGCAGAGGCATGTAAATTTACGAAATGGCACGTACAAGTGCGACATTTGTGAGAAGGTGTGCGGATCAGAAAACAATCTGTACAATCATATGCGGCGCCACCGAATTGGCGAAATAAAGGAAATTTCTGAGCCGAGAGATCTTCCGTTTGATTGTCCCAAGTGTGATAAGAAGTTTGGCAAGAAGCATCTTTTGAAAAGACACACCAAAGTGCACGAGGCGATAGAAAAGGGTCTCTACAAGTGCAAGACTTGTTTGAAGTACCTAGGATCATCTGCCTCGCTTGCGATACACGAACAGGGACACACTGGCAAGACCGCAAAGGATTAA
Protein Sequence
MAESKPFSAVVKQEHVDVEDPSAFCYETLVKEELIIEDELEPSPEKDDGQDQTEVLQNQSAGQPSNTEWHCEKCNQSYPTSKSFSAHKTRHKALETGRFACQQCERRFPDNNAQRRHKCKGKATGNPVSWVCEECNRTFPNRHIFYLHKYRHRVVKEARYRCELCDKCFSDKNAQTKHVQNVHREKRSIKAIQLKSEDERDSKAEEKDENGLFKCPDCDKRFEVRNSYTSHLRQHLAMKQERYKCKICELSFRTSSELKRHDRAHENHKSKLSNDPFASICPEATMKEENGIFKCSACEKTFEQRRAALRHLMRHGYVKRDRVQCKLCPMTFVNKTYLEKHQMEHESSKDVSASGSSSEKESDSDDLSQDGASEFKCTDCNKTFREKRLLNRHIRRHEAIKESKFPCKLCDVRCGSKRELITHEEMHARKQQTTIVSTEKVPPIILERNNHTVYKCPDCALIFTKQRVYSTHALRHVNVKNGTFKCETCGVCCPTRRNQLEHIRKHRAGKVIAPTQQDNFPFVCPECGKKFPLRKYLIQHVRRHEAVESGTFQCKICAKFFSTGVELARHEKIHEGKDKLEKFKCSECGFICASRSSFVWHLKRHEAIRSGKFECKVCGKLRAVMSPCTTKPSYKLTPFGIKLLCSSEERFETARAHLIANKVEFYTHEKRSERQLRVVVRGLPSASPEFVKKNLKESQNLDAVEVHAIKRKGEFASSEETPYIVTEGGCGVHLVHRQVISGGEREQISQGTVTYDWRVGFVIVFPFRCENPFTTNRALCRSTLPLASCLVLKTHRHLMAFLPFGSSVSVQVSFAISASCSSNMAFFQLSESSRDSASLWVKGSPSTARLLAVATTQLVSRLGGTGSSDSSDELSSLASSSLVSVDSTSCKGLGRGKPLSETWKSSYLPGSMCSRPLRLNSGDNGGFEDDCGGSTEVTSVTEPAVSSNPRNSSSLLSTSGTRSVSGFSSSFSAASSISTKRFGEPLAVGGTHLRRHAAMKEGKYQCKICSMRHASDRELKIHTKKHEMNVEMPSVPPPVIIVRNDHSAFQCPECGMVFTVRRAYNNHAQRHINIRNGMYKCDICEKMAKITVKTEPDYEMHSTLEDQQTQQEGSEDMTSFCYETVVKEEVILEDEFISPEEESARECNKAFATENKSHIKRAHEKHAQKSSEVSVLEEDGVFICSKCNKTHEAMKEGKYQCKICSMMAEITVKTEPGYEMHSSLEDQQTQQEESKATTSFCYETVTKEEVILEDEFVSPEEESATKQDMFCEECNKSFTNRALFRTHKYKHKVVKEGKYTCQICDKCFRDKYALTIHLQGIHLVSKLTKNKKNEELNEPDVKQFPKTITNEHGQFKCTECDERFEFQYLQQRHIRRHSALKQGLYKCEECNKAFATPSEIKSHLKRAHEKHAQKSSEVSVQEEDGVFICSKCNRKFEERHLCQQHILRHLALMKERVFTCSKCPKKFISEKYLEKHEAWHEVKAARVEQCEMVKCDECNREFRNKLLLSRHIRRHKLIKEGKFLCEICDARYTAKRQLMKHAEKHKKNPYLPSFEPPVVIERNNHSAFKCPDCGMVFTVRRAYDNHAQRHVNLRNGTYKCDICEKVCGSENNLYNHMRRHRIGEIKEISEPRDLPFDCPKCDKKFGKKHLLKRHTKVHEAIEKGLYKCKTCLKYLGSSASLAIHEQGHTGKTAKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-