Cqui005731.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- Znf711
- Assembly
- GCA_015732765.1
- Location
- NC:81900824-81932067[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 39 0.22 6.1 7.2 3.6 1 23 185 208 185 208 0.90 2 39 0.032 0.9 9.9 0.2 1 23 218 240 218 240 0.95 3 39 0.033 0.93 9.8 0.3 5 20 247 262 246 264 0.93 4 39 0.016 0.46 10.8 0.7 2 23 274 296 273 296 0.96 5 39 0.018 0.51 10.6 1.7 2 23 307 329 306 329 0.96 6 39 0.014 0.39 11.0 1.1 1 23 342 364 342 364 0.98 7 39 4.8e-05 0.0014 18.7 1.8 1 23 368 390 368 390 0.98 8 39 0.0087 0.25 11.6 0.2 1 23 396 418 396 418 0.97 9 39 0.00041 0.012 15.8 0.7 1 23 424 447 424 447 0.96 10 39 6.5e-06 0.00019 21.5 0.8 1 23 453 475 453 475 0.99 11 39 0.039 1.1 9.6 0.3 1 23 481 504 481 504 0.94 12 39 0.00041 0.012 15.8 0.6 1 23 510 532 510 532 0.99 13 39 0.0021 0.061 13.6 0.9 1 23 699 721 699 721 0.96 14 39 0.0062 0.18 12.1 0.2 1 23 727 750 727 750 0.96 15 39 0.00097 0.028 14.6 1.7 1 23 756 778 756 778 0.98 16 39 8.6e-06 0.00025 21.1 1.8 2 23 1020 1042 1019 1042 0.96 17 39 0.018 0.52 10.6 0.5 2 23 1080 1102 1080 1102 0.96 18 39 0.062 1.8 8.9 0.1 2 21 1107 1126 1106 1127 0.94 19 39 0.021 0.61 10.4 0.7 1 23 1174 1196 1174 1196 0.94 20 39 0.0044 0.13 12.6 0.6 1 23 1201 1223 1201 1223 0.96 21 39 0.0001 0.003 17.7 0.1 2 23 1228 1249 1227 1249 0.97 22 39 0.0074 0.21 11.9 0.2 1 23 1255 1277 1255 1277 0.97 23 39 0.0054 0.15 12.3 4.4 1 23 1283 1306 1283 1306 0.93 24 39 0.00025 0.007 16.5 1.9 1 23 1312 1334 1312 1334 0.98 25 39 0.016 0.46 10.8 0.2 1 23 1340 1363 1340 1363 0.95 26 39 0.0025 0.07 13.4 0.3 1 23 1369 1391 1369 1391 0.96 27 39 0.0028 0.079 13.2 2.4 1 23 1630 1652 1630 1652 0.97 28 39 0.058 1.7 9.0 0.1 2 23 1659 1681 1658 1681 0.95 29 39 0.0057 0.16 12.2 0.3 1 23 1687 1709 1687 1709 0.96 30 39 0.00065 0.018 15.2 1.1 3 23 1954 1975 1953 1975 0.94 31 39 0.0091 0.26 11.6 1.3 1 23 1978 2001 1978 2001 0.96 32 39 0.004 0.11 12.7 0.3 3 21 2007 2025 2006 2026 0.95 33 39 0.00019 0.0055 16.8 0.5 2 23 2035 2056 2034 2056 0.98 34 39 0.22 6.4 7.2 1.9 1 23 2060 2082 2060 2082 0.98 35 39 0.00044 0.013 15.7 2.4 1 23 2088 2110 2088 2110 0.97 36 39 0.00016 0.0047 17.1 0.6 2 23 2117 2139 2116 2139 0.96 37 39 0.017 0.49 10.7 4.2 1 23 2145 2167 2145 2167 0.97 38 39 0.011 0.31 11.3 0.1 1 23 2173 2196 2173 2196 0.96 39 39 0.00046 0.013 15.7 0.6 1 23 2202 2224 2202 2224 0.99
Sequence Information
- Coding Sequence
- ATGCTTGACCAGGAGCAAAGCACTATGCAGCACAATAATTTGGTTCCGGACACGACGGCACTGTGCCGAGTGTGTATGACGCCTAAAGAGGGGAACTGCACGAATCTGTACGATTCCTGTTCTCTTGCTACTAGTCAACCCAGCTTACACGAAATGCTTAAGATTATTTGTGTTCCGGTTTTCGGCAAATCCGAAGCAGGCGATCCACCCGGAATGCCGACGGACGTATGTTCAAATTGTCGGCACGCCGTCGTAGCGGCCTTTCACCTGCACCAGATGTGCGTCGAAACGGACCGTCGATTGGGCGAGTTGCTGGCATTGAGGTGGGAACTTGAGGGACCGGACGGAGGTGATCCACTGCAAGGATGCGATTACATTGAAACTAACGTGGCTGACAAAAGGATAAAAGACGCTCTCTCGAGCAATCAACAGTTGGACATGATAAAAGATGAACCGCTGGACTTGATGGATGAAAACGAGGAAGACTGCGATGAACCGAATCCTGCAGAGAACAAAGAGGGGGAAGCTGATAAAACAAATTCAGAAAAGCTACATCATTGCGAAATTTGCAACCAATCGTTTACAAGGATGAGTGCAAAAGTCACTCACATCTCATTTCGTCATCCTGATGTAGGTGACCCGAAGGGGCCTTTCACGTGTGATTTGTGCGGAGAAACTTTTGCATTCCGCGGACCGATGCGGTTGCACAGAGTCTCGCACCTCGGAGAAGTCGTTTGTACCTGTGGTCGTTCTTTTTCGAGTAAAAAAACCTTCAACGCACATATTGATGCCGGAACATGCACGGGAGCCCAGGAAAAAGAATGTAAACTGTGCAATGCAACTTTTCGAACACTTTATAGTGCCGTAAATCATCGCAGAATGGTGCACCCAGAGCAGATAAAAACGCTGCCGGAACTTTACTGTGATATATGTAACAAGCCTTTCCATGGTCGACGCGTATTAACACAACACAAAAGAACAGAGCATGCAAAGGTAACTGCAACTACAACGCAGAAGAAAATGTACGAATGTTCAATTTGTAGAGAAACGTTTAATACATTATCAGCTAGAGGTAATCACCGTAAAAAACACAAAGgcttttttaaatgctcaattTGTGATAAAGTTTTCATGAATAAACATGGTTTGAAGGGCCATATGGTCAGGCACTCAGGGGTCAAGCCATTTGCGTGCGATCAGTGCCCAATGCGATTTTTTGTGCGAATGGAACTAAGTGAACACATGCTCACGCATACGAGGGCAAAGGATTACACCTGTGAAATTTGTGGAAGCAGGTTTTCGAAGGAATATTCAATGATTAAACACATCAGATTCATCCACGAGGGCCAACGTCCTTACGAGTGTTCGGTGTGTGGATTCAAGTTCTCCATCCTATCGCAGCTCAAACGTCACATGCTAACTCACACGAAAGAAAAGCCACATAAATGCCAGCTGTGCCCCCAAGCCTACGCCCAGACCAACGATCTGGTCAAGCACGCGGCTCGTGTACACGGCATTGACAAACCATATCAATGCGATCGGTGCGACGAGGGTTTCCGGTTGTTAACGgatctgcgacagcactaccggGTGCACGTGCAATCGACGGAGGGTGGAGCCGACCAGATGGAGGAGGTGCGATTTACCACTATGGCGATTTTGCAGAGAGCGTTCTCGAAAGACAAACAACAGCAGGCTGAGGGAAAATTGGAATCGCCacttgcaatcaaaatgaaatttggtttgtttgcGGACACGAAGGCGCTGTGCCGAGTGTGCATGACGGCCACGGACGGACATCGCACTGACCTGTACGACGGAACTTCGCTTGTAGCCGGACAGCCGAGTTTACATGAAATGCTGAAGGCCATTTGCGCCGCAGTATTTGATAAATCTGATGCTGACTATCCACCGGGATTTCCGACGCAGGTCTGCGCCAACTGTCGGAATGCTATCCTCGTGGCCTTCAAGCTACACCAGACGTGCATCGAAACCGACCGCCGGTTGGGCGAGCTGCTGGCGCTAAAGTGGGAGCTTCAGGATCTTGGGGGCGGTGGAGAATCCGGAGATCCGCTGAGGTCCAGCCTTCGCCCCTTTGAGTGCCAGATTTGTGGTTTCAAGCTGTTCACGTCGACGCAGCTGAAGCGCCACTTGCTTGGCCATTCGAAGGAAAAACCCTACAAGTGCGAGCTTTGCACACAAGCCTTCGTCAAGACCGACGAGCTGGCCAATCACGTGGCTCGCAAACACCGGGGCGGGCTACCGTACCCTTGCGATCGCTGCGATGAGTCGTTCCGGTTGATGACGGAGCTGCGCCACCACTACCGGGTTCACGTTCAAGCTGGCGAACAGATCGATGAGATGCGGTTTACCGCGATGGCTACGTTGCAGCGAATATTCGCTAGGGATAAACAGAAGCTGCCTGAAGAAGGCAACTGTTCAGTCACCATGTTCGATCAAACTGGAGGCACCGCTAAACTATGCCGAGTCTGTATGACGGCCAAAGAGGGTCATCGCACCGACCTTTACGATACCACGTCATTAGTATCCGGCCAGCCCAGCCTGCACGGAATGCTGAAAGCGATTTGCGCCCCGGTATTTGAGAAATCCGAATCAGACCGCCCACCCGGAATGCCAACGAAGGTTTGCTCGATCTGTCGGAATGCTATCCTCGCGGCCTTCAAGCTGCACCAGACGTGCATCGAAACCGATCGCCGGTTGGGTGAGCTGCTGGCGGTCAAGAGAGAACTACAAGATCTAGAACATAACGATGGACCGGGAGATCCATTGGGGTCCAACAGCAAGGAAACGCTGCGTGATGAAATGTTGAACATGAGCGTTGAAGGGGGTTGCGTTAAGACGGACGGAGCAACGCTTCTTCTTAAGGAGGAGCAACCAAAAGAGGAGAAGGCAGATTCACTTCCTGAAGCTGAACATGTGGGTACGATAAAAGTTGAAGAGCTGAACTTGATGGAGGCAAGTGACAATGACAACGATAATGCTTCCGACTGTGATGAGGACGAAGAACCTCTCGTCGACGAAGATACGAGCAAAACGACCTGTAAGATTTGCTCGAAATCGTTCAGTAAAGCATCCCTGCTGAGAAAACACATGAGCATAAAGCAcaagaaaacactaaaaaaatccgTGAAATGTTCCtgtgggagaatttttaaaagcgAAAAAAGATTTAATGAACACACCGCTTCCGGTACGTGCTCAGGAGAGATCGGTAGAAAGTGTAATTTATGTGATAAAATCTTCAAATCGGTTGACGTCATGGTTAGACATCGCAACTCGGTGCATTCAGAGCCCGTCGTATGTTCCGAGTGTGGTAAAACGATGGCGAACTTCAACAGCCTGCGGATGCACTTGCGGGTTGGATACTGTTCCAAGCAGAAAGATAAACCCCCGACGGAAGCTATGCTTGCTGCCAGGACTTGCAAGGTTTGTGGTGAATTGCAGAAAACCCGTTTCGCGGTAAGTGGCCACATGAAGGTTGCGCATCCGGACCGTATGTTTCGTTGCGACATTTGCGGTAAGGAGTTTCAACTTCAGAGATATTTGGATCTGCACAAAGTATCGCACGGTCCTAAAACGTATCTTTGCCAATCTTGCAACGAAATCTTGCCCACAAAAGAAGCTCTCAAGAAGCATCGGCGAACCCACAAAGCTCCCATCACGTGCAACGTTTGTGGAAAAGTTGTGGCCACCAATTATTCACTGTCCGTTCACATGGAGCGGCACGTAGGCCTAAAACCGTTCGCTTGTGACAATTGCCCGATGCGGTTTTTCACGAAAGCGGAGATAAGAGGTCACATGCTAACGCACACCAAGAAGCAGGACCACGTTTGTGACCTTTGTGGGTCCCGATTCACGACCAATCATTCACTGAAAAAGCATGTTATACATGTCCACGAAGGTCAGCGTCCCTTTCCGTGCTCGCTGTGCAGTTTAAAGTTTGCCCACGCGAACCAGCTGCAGCGCCACATGTACACGCACACCGGGGAAAAACCCCACAAGTGTGAACTTTGCCCGCAGGCGTACGCCCAGACCAACGATCTGGTCAAGCACGTGGCCCGCGCCCACGGCGATGGCAATCCGTACCTTTGCGACCTGTGCGACGAGGGCTTCCGGTTGTTAACGgatctgcgacagcactaccggGTGCACGTGCAATCGACGAAGGGTGGAGCCGACCAGATGGAGGAGGTGCGCTTTACCAGTGTGGCGATACTGAAGAGGGCGTTCGCTAAAGCTAAACAACGGTTAGGAATCGATAGCGGGCTGAATTATACTGCTGGTATCATCACCACCATGCAGTTCGACCTGGTCAGGGACACCACCAAGCTTTGCCGAGTGTGCTTGACGGATAGCGTTGGACATCGCACCGACCTGTACGAAGCCCTAGTATCTGACCAGACTAGCTTGCACGAAATGCTGAAAGCCATTTGCGCCACCGTATTCGATAAATCCAACGCTGAGTGTCCACCCGGCATGCCTACGACGGTTTGCGCCGACTGCCGGAATAATATCCTCGTGGCTTTCAAGCTGCACCAGTCTTGCATCGATAGTGAGCGTCGGCTGATAGAGCTGTTGGCGCTAAAGTGGGAGCTTCGAGATCTGAAGAGTGAGGATGAATCCGGAGATCCACTTAAGTCCGTCGGTGAGGAAGCGCcgcaagaaaaaatgttaagcGTTGAATTGGAAAGTCAAGTTAAGCTCCAACGAGAAATGCATCTTCTCGAGGAGGAGCAACCAAAAGACGAGATGGAAGATTCACTTTTAGATAGTGAGCATGGAGAAACGATAAAGGTTGAAGAATTAGATTTGATCGACGTGGACGACAACGAAAACGGCGATATTTCTGAAACTGGTATTCGTCCCTTCGCGTGCTCACAGTGCAGTTTAAGGTTTTCCACCGCACATCGACTGCAGATCCACATGTACACCCATACCGGGGAAAAACCGAACAAGTGTGAACTTTGCCCGCAGGCGTACGCCCAAACCAACGATCTGGTCAAGCACGTGGCCCGCGCCCACGGCGATGGCAATCCGTACCTTTGCGACCTGTGCGACGAGGGGTTCAAGCTAATGACGGACCTGCGCCAGCACTATCGGGTGCATGTGCAATCGACGGAAGGTGGCGCCGACCAGATGGAGGAGGTGCGCTTCACCAGTGTGACGATTCTGAAGAGGGCGTTCGCTAAAAAAGGTGCAGTAATGCCGCTCGATCTGATCGCGGACACCACCAAGCTTTGCCGGGTGTGCATGACGGCCAAGGAGGGTCATCGCACCGACCTGTACGATGCCGCTTCGTTCGTGTCCGGCCAGCCCAGCCTGCACGGGATGCTGAGAGCCGTTTGCGCACCGGTATTTGACAAATCCGACGACGCAGTAGACCGTCCACCCGGAATGCCCACCAAggtttgcgccatctgtcggaacgCCACCATTGCGGCCTTTAAACTGCACCAGATTTGCATCGATACCGAGCGCCGGTTGGGGCAGTTGCTGGCGCTGAAGCGGGAACTTCGGGAAGGGTCGGAGGGCGATGAGATTGGTGGAGAGTGTGGCGATCCGTTGAAGAGTAATGCTGAGGGGGCATTGGAACCAACAGTGCAGACACAGCCTGCAATGCCTGAAGAGGAACACGAAGAAGAAACGGAACCTCAGGAGTCCGAGCAAATTCCCGAGAATATCGAAGATTCTCTGCCAAATGGTGAACACGAGGGTTCGATTAAAGTTGAAGAATTAGACTTGGTTGATACCAGCGATAACGAAGAACATGCCGAACATGCTTCTGATTCGGCCGAAAATCAGGAACCTACCAGCGTAGACTATAAAGTCAAGAGAAATTGTAAAATATGCTCGGAAACGTTCTACAAACCTTCCTTGCTGAGAAATCACATGACGCAAACGCATCAGCTGTACATGTGCGAAATATGCCACGAAACGTTTGGATCTCTTTCCTGGTTCGTTCAACACAAGTCCATGAAGCATAGAAAGCGACCTGCTTGTTCAAATTGTGGTGAGAAATTCGTTACTAAACTTGATTTGAAGAACCACCAACAGCAAGGATCATGCTCGGGAAAGATTAATCAATGCTCAATATGCAAGGAAGTATTTCCCACAAGAGCTTCTCTGTATAAACATAGGATAACCCACAGGACCACTTACAAATGCAATATTTGTGACGTAATGTCGATCTCGAAATCAACGCACGATCTTCACATGAGGAGACACTTGGGCGATAAACAGTTCGCTTGTAACCACTGTCCAATGCGTTTTCACACAAGAGTAGAGCTGGCAAAACACATACTAACGCACACCAAGACCAAGAACACAGTTTGTGAAATTTGCGGCTCTCGATTCACAAGAAAAGAATCTCTAAAGATGCACGTAAAACGTGTACATGAAGGATATCGTCCCCACGAGTGCTCGCTGTGTGGTCTAAAATTTTCCCTAATATGTCTCCTCAAGCGCCACATGTACACCCATACCGGCGAAAAACCATTCAAGTGCCAGCTGTGTCCGCAGGCGTACGCCCAAACCAACGATCTGGTCAAGCACGTGGCCCGCGTTCATGGCCTCGACAAGCCTTACCAGTGCGATCGGTGCGATGAGGGGTTCCGGTTGCTGACGGAACTGCGCCAGCACTACCGGGTGCACGTACAATCGACGGAAGGTGGCGCCGAACAGATGGAGGAGGTGCGCTTCACCAGTGTGGCAATTCTGCAGCGGGCATTCGCCAAAGATAGGCAGCCGACGGGAGATGAAGCTTTCGAGTAG
- Protein Sequence
- MLDQEQSTMQHNNLVPDTTALCRVCMTPKEGNCTNLYDSCSLATSQPSLHEMLKIICVPVFGKSEAGDPPGMPTDVCSNCRHAVVAAFHLHQMCVETDRRLGELLALRWELEGPDGGDPLQGCDYIETNVADKRIKDALSSNQQLDMIKDEPLDLMDENEEDCDEPNPAENKEGEADKTNSEKLHHCEICNQSFTRMSAKVTHISFRHPDVGDPKGPFTCDLCGETFAFRGPMRLHRVSHLGEVVCTCGRSFSSKKTFNAHIDAGTCTGAQEKECKLCNATFRTLYSAVNHRRMVHPEQIKTLPELYCDICNKPFHGRRVLTQHKRTEHAKVTATTTQKKMYECSICRETFNTLSARGNHRKKHKGFFKCSICDKVFMNKHGLKGHMVRHSGVKPFACDQCPMRFFVRMELSEHMLTHTRAKDYTCEICGSRFSKEYSMIKHIRFIHEGQRPYECSVCGFKFSILSQLKRHMLTHTKEKPHKCQLCPQAYAQTNDLVKHAARVHGIDKPYQCDRCDEGFRLLTDLRQHYRVHVQSTEGGADQMEEVRFTTMAILQRAFSKDKQQQAEGKLESPLAIKMKFGLFADTKALCRVCMTATDGHRTDLYDGTSLVAGQPSLHEMLKAICAAVFDKSDADYPPGFPTQVCANCRNAILVAFKLHQTCIETDRRLGELLALKWELQDLGGGGESGDPLRSSLRPFECQICGFKLFTSTQLKRHLLGHSKEKPYKCELCTQAFVKTDELANHVARKHRGGLPYPCDRCDESFRLMTELRHHYRVHVQAGEQIDEMRFTAMATLQRIFARDKQKLPEEGNCSVTMFDQTGGTAKLCRVCMTAKEGHRTDLYDTTSLVSGQPSLHGMLKAICAPVFEKSESDRPPGMPTKVCSICRNAILAAFKLHQTCIETDRRLGELLAVKRELQDLEHNDGPGDPLGSNSKETLRDEMLNMSVEGGCVKTDGATLLLKEEQPKEEKADSLPEAEHVGTIKVEELNLMEASDNDNDNASDCDEDEEPLVDEDTSKTTCKICSKSFSKASLLRKHMSIKHKKTLKKSVKCSCGRIFKSEKRFNEHTASGTCSGEIGRKCNLCDKIFKSVDVMVRHRNSVHSEPVVCSECGKTMANFNSLRMHLRVGYCSKQKDKPPTEAMLAARTCKVCGELQKTRFAVSGHMKVAHPDRMFRCDICGKEFQLQRYLDLHKVSHGPKTYLCQSCNEILPTKEALKKHRRTHKAPITCNVCGKVVATNYSLSVHMERHVGLKPFACDNCPMRFFTKAEIRGHMLTHTKKQDHVCDLCGSRFTTNHSLKKHVIHVHEGQRPFPCSLCSLKFAHANQLQRHMYTHTGEKPHKCELCPQAYAQTNDLVKHVARAHGDGNPYLCDLCDEGFRLLTDLRQHYRVHVQSTKGGADQMEEVRFTSVAILKRAFAKAKQRLGIDSGLNYTAGIITTMQFDLVRDTTKLCRVCLTDSVGHRTDLYEALVSDQTSLHEMLKAICATVFDKSNAECPPGMPTTVCADCRNNILVAFKLHQSCIDSERRLIELLALKWELRDLKSEDESGDPLKSVGEEAPQEKMLSVELESQVKLQREMHLLEEEQPKDEMEDSLLDSEHGETIKVEELDLIDVDDNENGDISETGIRPFACSQCSLRFSTAHRLQIHMYTHTGEKPNKCELCPQAYAQTNDLVKHVARAHGDGNPYLCDLCDEGFKLMTDLRQHYRVHVQSTEGGADQMEEVRFTSVTILKRAFAKKGAVMPLDLIADTTKLCRVCMTAKEGHRTDLYDAASFVSGQPSLHGMLRAVCAPVFDKSDDAVDRPPGMPTKVCAICRNATIAAFKLHQICIDTERRLGQLLALKRELREGSEGDEIGGECGDPLKSNAEGALEPTVQTQPAMPEEEHEEETEPQESEQIPENIEDSLPNGEHEGSIKVEELDLVDTSDNEEHAEHASDSAENQEPTSVDYKVKRNCKICSETFYKPSLLRNHMTQTHQLYMCEICHETFGSLSWFVQHKSMKHRKRPACSNCGEKFVTKLDLKNHQQQGSCSGKINQCSICKEVFPTRASLYKHRITHRTTYKCNICDVMSISKSTHDLHMRRHLGDKQFACNHCPMRFHTRVELAKHILTHTKTKNTVCEICGSRFTRKESLKMHVKRVHEGYRPHECSLCGLKFSLICLLKRHMYTHTGEKPFKCQLCPQAYAQTNDLVKHVARVHGLDKPYQCDRCDEGFRLLTELRQHYRVHVQSTEGGAEQMEEVRFTSVAILQRAFAKDRQPTGDEAFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -