Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: -
Assembly: GCA_015732765.1
Location: NC:41969569-41972617[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.2e-05 0.036 13.8 0.3 13 40 208 232 202 235 0.87

2 5 0.00064 1 9.1 0.1 18 41 241 261 236 262 0.89

3 5 0.0001 0.17 11.7 1.4 3 41 255 289 254 292 0.90

4 5 0.099 1.6e+02 2.1 0.4 18 30 297 310 291 318 0.78

5 5 0.056 91 2.9 0.4 35 44 340 349 325 349 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.2e-05	0.036	13.8	0.3	13	40	208	232	202	235	0.87
2	5	0.00064	1	9.1	0.1	18	41	241	261	236	262	0.89
3	5	0.0001	0.17	11.7	1.4	3	41	255	289	254	292	0.90
4	5	0.099	1.6e+02	2.1	0.4	18	30	297	310	291	318	0.78
5	5	0.056	91	2.9	0.4	35	44	340	349	325	349	0.92

Sequence Information

Coding Sequence: ATGGCCGTGATAACAGTGGACAATTATTTGCTGTGCTGCCGGATGTGCCTGGAGTTGGACAAGCACGAGCTGTTCCAGAACATTTTCAGCACCAAGCTGGAGGGAAGTGAAATAACTCTCCAGCTGGCGCTGGAGAAGACGACGGGTATCAAGTGCTCCTTCGACGATGAGCTCCCATCGCACATTTGTTCGAGCTGCCAGCTCCGGCTGCAGGATGCGCACAACTTCATGCTGCAGGGCTGCGTGAATCAGGACTTGCTAAAGACGCTCAAGATCGCGGCAGCTATGAGAGCTACTGCAGAACAATGCACGCCAATTAAGGTAGACCCCGGCGAGCAGGATGACGTTGTAAACGTAACTTTTGATAGAGGAGATAGCTTCCGCGTCGAGTATCTGGACGATGACAGTTTGCATGAAGACACCGTTGAAGATGATTGCGACGATTCAAAGGAGCAGAACGACTTTGGGAACGATTCTGAGGAACAGCTGGAGGAAGACTCGGACGAGTCGTCGCACATTGTGTTTGATGAGCCGACGGATGCTGTGGATTTCAtcttgcaaaacttcaaggacGTGAGCAAACAGCACTCGCCGACGAAAGCGAAAAAAGCACCGCCCATTGTTTCGCAAAGACACGAGTGCGAAGTGTGCCACAAGACGTTCCAGCGGAAATCAAATCTGGTTGACCATCTAAGGTTGCACGCTAACGTGAAGCTCTTCTCTTGCAATTACTGCGACGCAGCGTTCGTTCAGTCTGGTAACCTCAAGAGCCATATCCGAACTCACACTCAGGAGAAACCGTTCACGTGCAGCGATTGCGGGAAGGCTTTCAGTCAGTCCAGTGCGCTGAAAACGCACATGAGATCTCATACCAACACGCGAGACTACATTTGTGACATTTGCCAAAAGGGCTTCACCAACAAGTCGGACCTGACGAAGCATAAAATCACCCACTCGGATCTGCGGTACTATCAGTGCGTCCAGTGTACCGACCGGTACTTTGCCCAGAAGGTGCATCTCAAAAAACATCTCAAATCGCAACACTCCGAAGAAGACGAGGAAGACCTGCTGAGGCGTGGCACGTTGAAGGAGGGTGTACACCTGAGCGATGTGAAGCCGCCGACTAGTGGGTCGATTTTTATTCGGACCAGATATACTCCAAATGAGTAA
Protein Sequence: MAVITVDNYLLCCRMCLELDKHELFQNIFSTKLEGSEITLQLALEKTTGIKCSFDDELPSHICSSCQLRLQDAHNFMLQGCVNQDLLKTLKIAAAMRATAEQCTPIKVDPGEQDDVVNVTFDRGDSFRVEYLDDDSLHEDTVEDDCDDSKEQNDFGNDSEEQLEEDSDESSHIVFDEPTDAVDFILQNFKDVSKQHSPTKAKKAPPIVSQRHECEVCHKTFQRKSNLVDHLRLHANVKLFSCNYCDAAFVQSGNLKSHIRTHTQEKPFTCSDCGKAFSQSSALKTHMRSHTNTRDYICDICQKGFTNKSDLTKHKITHSDLRYYQCVQCTDRYFAQKVHLKKHLKSQHSEEDEEDLLRRGTLKEGVHLSDVKPPTSGSIFIRTRYTPNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00402060; iTF_00400976; iTF_00400786;
90% Identity: iTF_00402060; iTF_00400976; iTF_00400786;
80% Identity: iTF_00402060;