Basic Information

Gene Symbol
-
Assembly
GCA_015732765.1
Location
NC:84793025-84794587[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0007 0.57 10.1 0.1 22 45 31 58 20 59 0.82
2 4 3.2e-05 0.026 14.4 0.1 18 45 124 157 110 158 0.82
3 4 7.7 6.3e+03 -2.9 0.0 7 15 205 213 203 220 0.62
4 4 7.1e-07 0.00058 19.7 0.2 21 45 236 261 228 262 0.93

Sequence Information

Coding Sequence
ATGGAGTGGAGTTTTGGCAACACCGTGATGCTCGCAGGAATCGTCAAACAGTATCCGATTTTGTACGACGGAACGATCCACTACAGAAAAAGGCAATTTGCCTGGGGCTTGGTTGCGAAGCGAATAGGACAGGAAGCAACCCCCAAGGACTGCCAAATCAAGTGGAGCAACTTGAAAAAGGAGTTTAGCCTGTCCCTAGGCCGTACTTCGCCATCACCCAACAGTGCACTGGCTCCGCATTTGAGCTTTCTGCTTCCGTTTATGAAGCAGCTGCAAACCACCGAAGAAAGGGCACTTGATCCGATGAATAGTTTGAAGTACTTGATAAAGCTAACAGGTTTAGTTCGAGAGCACCCTTGCCTGTACAACAAACGTGGCAAGCAACTTAGGGCATCCATTTGGGAGCAGATTGCAACGGATATGGAAGATGGAACAACTGGCACACAATGCCAAACCAGATGGTTGAGACTGCGAAACAAATACACCAACTCCCTGAGAATGGGAACTCCAATGACACCAAACGGAATGAAACAGCATCTCGAATTTTTGAACGAGTACGTGAATGTGCAaccacaaatttcacaaaaaccgCCGCCACCCTTGAAGGAGAGCGAAGACGACAAGTTTCTGTACAAGCTGATTGACGTCGTCCGAGATTATCCTATCCTGTACGATGGAACCAAATTCAATCCTGCAATCTTTGAAACTAATTGGCAGAATGTGGCTAAAACGTTAGGAAACGGAGCAACTGCCAGCGATTGCCGATACCGATGGCGAAAACTGCGCAAAAATTTGAAACTTCATCTGAAGGGCACAACGTTTCAGTTGAAAAATCCCGCCTTAATTCAACGGCTAGAGTTCCTAAAGCCGTACGTGATGTATAAACGGCCTGCCGAAGAAACCCACATGACGGAAGCGAAGCGGCGAGCTGGCCTGTTGGTCACCTTTGGTCGGCAGTGCCAGGCCCTGCAAATCGATATCCGGGACAACGATACGATGCATCTGTTGAACTTTCTGCCGGACATGGCAAGCATGAACGAGGCGCAGAAGAGACGCTTCCGGATTGGGGCGGTTAAGACAGCCCGGGAGATTCTCGGCGATGAcgcgactgactga
Protein Sequence
MEWSFGNTVMLAGIVKQYPILYDGTIHYRKRQFAWGLVAKRIGQEATPKDCQIKWSNLKKEFSLSLGRTSPSPNSALAPHLSFLLPFMKQLQTTEERALDPMNSLKYLIKLTGLVREHPCLYNKRGKQLRASIWEQIATDMEDGTTGTQCQTRWLRLRNKYTNSLRMGTPMTPNGMKQHLEFLNEYVNVQPQISQKPPPPLKESEDDKFLYKLIDVVRDYPILYDGTKFNPAIFETNWQNVAKTLGNGATASDCRYRWRKLRKNLKLHLKGTTFQLKNPALIQRLEFLKPYVMYKRPAEETHMTEAKRRAGLLVTFGRQCQALQIDIRDNDTMHLLNFLPDMASMNEAQKRRFRIGAVKTAREILGDDATD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00400511;
90% Identity
iTF_00400511;
80% Identity
-