Cqui009744.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_015732765.1
- Location
- NC:10901835-10911936[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7 6.3e+03 -2.9 0.1 33 43 200 210 199 212 0.89 2 2 1.2e-14 9.5e-12 44.6 0.1 3 44 633 674 631 676 0.95
Sequence Information
- Coding Sequence
- ATGGTCACGCTAGGCCCCAAAAAGGATGGCGGACCGAACGCCGAGTTCTTCAACGCGCCCGAATCGCTGCAGGGGTTTGAAACGGTGCGCCAGTGGCTGCAGAAAAACTTCAAGAAGTACTTGGCGCCGGATCCGCCCACCAAGGAGTCGCTGGCCCAGCTGATCGTGCAGTTTGTGCAGTACCAGGAGACCAAGCTGGGCAAAAGTTCGCAGGATCCGCCGACGACCCGGCTGCCGaTGCGATGCTTCATGGACTTTAAGCCGGGCGGTGCGCTGTGCCACATTCTGGCCACCATGTACCGGTACAAGGCGGAGCAGCGCTGGCGCAAGTTTGACTTTACCGTCAACAAGAACCCGATGCGCAAGGACCCCATCATCCAGATGCTGTTGGACATGGAGACGGCTCTGATCGAGGCCGAGTGCATGCGGCTGCCGATTGTGTACATCCGGCCGGAGGTGGACAAGCAGACGGCGAACCGCATCACGGACATTGTGACGAACCACCAGGGCGAGATGACTCCGGATGAGGAGGAGGCGACGCACATCATCTACCCGGCGGTCGATCCGTTGCCGGAGGATTACGCTAGGCCTACGTTCCGTCGGGACAAGCACGTAATGATCCACTGGTATTACTTCCCGGAGTCGTTCGATACGTGGGTTCCGAACACGTTCGATCTGCCGGACAACGTTCCGGATTGTCCGCTGTCGCCGGGGGATCGTTGGCGCGTGTCGGCTTCCTGGGTCACCGACCTAGAAGAGTACAACGAGTGGATGGCCGAGGAGGATTACGAAGTGGACGAAGCCGGTCGCAAGAAGGTCCACAAGCATCGGCTCAGCGTTGACGATTTGATGTCCGCCGGGGACGAGAAGGTCAAGAAACCGGGCAAGTTGACTCACCAGAAGCGCAAACGTTCGCCGTCGCCCCAAGCCAAGGGTGGAAAGCGCAAGAGTGGCCGTTCGCCGGCCGTTTTCCAGAAGAAGCCACGCGCCGACGACGAGGAATCGGAAGATTTGACGAAAGACATGGACGATCCCCCAGCGGAAACCAACCTGACCGAGGTGAAGGCCAGCTCGAGCAACTCGGCGTCCGGCCCGGCAACTCCGCAGCCGCCCAAGCGAGACCCGGAGATGATGCCGTTGAAGTACGCCACCATGACCGATCTGGACGACGACATCGATCGAGCCAACGCGGATCGTGCCGGAGATGACAGCCAGGCTGGCAAAACCAGCGACAACAGCAACACGCAGGAATTCCCCCACAAGGGCGACCTCGAGGACAACGTTACCGAACAAACCCATCACATTGTCGTCCCATCTTATTCGGCATGGTTCGATTACAACTCGATCCACGTCGTCGAGAAGCGCGCCCTGCCCGAGTTCTTCAACGGCAAAAACAAATCCAAAACCCCGGAGATTTTCCTCGCTTATCGCAACTTCATGATCGACACCTACCGGCTGAACCCAACCGAGTACTTGACGAGCACCGCTTGCCGGCGCAATCTGGCCGGTGACGTGTGTGCGATCATGCGCGTCCACGCCTTCCTCGAGCAGTGGGGCCTCATCAACTACCAGATCGATGCCGACTCGCGCCCAACCCCGATGGGACCTCCCCCGACCTCGCACTTCCACGTGCTGAGCGACACCCCGTCGGGCCTCCAACCGCTAAACCCACCCAAAACGGCCCAACCCTCGGCCGCCAAAACCCTCCTCGACCTGGACAAAAAAACCGACAAAAAAGAGGACGCACCCGCTGGCTCCGCCGACGCAATCAAATCCGAACCCGGCGCACCCGCCCTCCCCGGTTCCGACCCCAGCGGCCAGTTTGGCCTCCGTCTCGACCAATACGCCAAGAAACCATCCGCGATGCGCAACAAAACCGCCGCCAGCATGTCCCGCGACTGGACCGAACAGGAAACGCTCCTCCTGCTCGAAGGCCTCGAGATGTACAAGGACGACTGGAACAAGGTCTGCGAACACGTCGGATCGCGCACCCAGGACGAGTGCATCCTGCACTTCCTCCGTCTTCCGATCGAGGATCCCTACCTGGAAGACGACAACACCTACCTCGGTCCGCTCTCCTACCAACCCATCCCGTTCAGCAAAGCCGGAAACCCCATCATGTCCACCGTGGCCTTCCTCGCTTCGGTCGTCGACCCGCGCATCGCTGCAAGTGCGGCCAAAGCAGCCATGGAAGAGTTTGCTGCCATCAAGGACGAAGTGCCCGCCTCGATGATGGACGCGCACCTGAAGAACGTGGAAAAGTCCAGCTTCGGTGGAAAGTTTGACCCGTACGCGGGGCTGACGACCAGCGGAATCGCCGGCACCGGCACCGACAAGGACAAGGAGGAAGAGGAGGGAAAGACGGCAGGAGGAGCGACGACGCAGGCGGGATCATCGGGGGCCACCCCGGCGACGCCCGGTGGCGATGTGGAGATGAAGGATGTCACCAAGAAGGAGGACGAAAAAGACAAACCGACCGagaagtcgtcgtcgtcctcggaAGAGGGTACTAAATCTTCTGATTCTGATGCCGCAGCAGGAAGTGACCCGACCAAGCCGGCCGAAGCAGGTGCGGACCCCGCCGCTGCCTCCGGAGACAAGACCAAGGACAAGGACGCAGAGTCAACTGCGGTGGTCGCTGTCGCCAAGGAGAACGGCGACCCGAAGGTGTTCAACGAGGGAAATCTGCagtcggctgctgctgctgccctgGCCGCGGCCGCCGTCAAGGCGAAACACCTGGCCGCCGTTGAGGAGCGCAAAATCAAGAGTCTGGTCGCGCTGCTCGTTGAAACGCAGATGAAAAAGTTGGAGATCAAGTTGCGCCACTTTGAGGAGCTCGAAACGACGATGGAACGCGAACGGGAAGGTCTGGAGTACCAGCGGCAGCAGCTGATTCAGGAGCGGCAACAGTTCCACCTGGAACAGCTGAAGGCGGCCGAGTTCCGGGCTCGCCAGCAAGCCCACCAGCGATTCCAGATGGAACAAGGCCAGTGGCAGCAGCCGCCACCGATGGGCGTTGGTCCGGGTGTGCCTCCTCCGCCAGGTGGCATTCCGGCCGCACAACAGCAGCAACCCCAAGGACCACCGGGACAGGGTCCAATGCCGACCCCCGGAACTAACCCTCAGCAGCAGCCACCAGTGCCGTCTACCGGTGGACACCCTGGACCGGTTCCACCGAACATCTCGGCACCAGCCCAGCAGCCGCAACTGCAGCCACCCAGCAGCAACGGAGTTATCTCTGCTCCTCCTACTTCGATGCCTGTCGACGCTGGTACTACGCCGCCAAATAGCGTTATGCCCCCGACGGCAGCCCCGGCCCAACCTGGAATACCCCCGGCGGTgctacagcagcagcagcctccCCAGTCCCAGCAGCTAGCAGCGGCACaaccagcaccagcagcagcacaggCCGCTCCCGGAGGCGTTCCACCGTCCAGCGTCGGGGGACCACCCGGGCCTATGCCGCCGCAGGCACCTTCTTCGTAA
- Protein Sequence
- MVTLGPKKDGGPNAEFFNAPESLQGFETVRQWLQKNFKKYLAPDPPTKESLAQLIVQFVQYQETKLGKSSQDPPTTRLPMRCFMDFKPGGALCHILATMYRYKAEQRWRKFDFTVNKNPMRKDPIIQMLLDMETALIEAECMRLPIVYIRPEVDKQTANRITDIVTNHQGEMTPDEEEATHIIYPAVDPLPEDYARPTFRRDKHVMIHWYYFPESFDTWVPNTFDLPDNVPDCPLSPGDRWRVSASWVTDLEEYNEWMAEEDYEVDEAGRKKVHKHRLSVDDLMSAGDEKVKKPGKLTHQKRKRSPSPQAKGGKRKSGRSPAVFQKKPRADDEESEDLTKDMDDPPAETNLTEVKASSSNSASGPATPQPPKRDPEMMPLKYATMTDLDDDIDRANADRAGDDSQAGKTSDNSNTQEFPHKGDLEDNVTEQTHHIVVPSYSAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIFLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPLNPPKTAQPSAAKTLLDLDKKTDKKEDAPAGSADAIKSEPGAPALPGSDPSGQFGLRLDQYAKKPSAMRNKTAASMSRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTYLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPYAGLTTSGIAGTGTDKDKEEEEGKTAGGATTQAGSSGATPATPGGDVEMKDVTKKEDEKDKPTEKSSSSSEEGTKSSDSDAAAGSDPTKPAEAGADPAAASGDKTKDKDAESTAVVAVAKENGDPKVFNEGNLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQMEQGQWQQPPPMGVGPGVPPPPGGIPAAQQQQPQGPPGQGPMPTPGTNPQQQPPVPSTGGHPGPVPPNISAPAQQPQLQPPSSNGVISAPPTSMPVDAGTTPPNSVMPPTAAPAQPGIPPAVLQQQQPPQSQQLAAAQPAPAAAQAAPGGVPPSSVGGPPGPMPPQAPSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400510;
- 90% Identity
- iTF_00400510;
- 80% Identity
- -