Cqui004339.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- bab1
- Assembly
- GCA_015732765.1
- Location
- NC:28068221-28076981[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-12 2.3e-09 36.6 0.0 2 45 437 480 436 480 0.93 2 2 3.2 2e+03 -1.6 0.3 4 15 582 593 582 597 0.85
Sequence Information
- Coding Sequence
- atgggcagcagcgaaGCGCAGACGTACTGCCTGCGATGGAACAACCACAAGTCCAACCTGGTCGAGATCCTCGACGCGCTCATCAAGATGGAGTGCTACGTGGACTGCACGATCGTGGTGGACGAGCAGAAGCAGTTCAAGGCGCACCGCGTGGTGCTCGCCGCGAACTCGCCCTACTTCCAGTCGATCCTGCAGGATGTCCCGATGGACCACTGTAGCATCCTGTTCCCAGGCGTGGCGGCCTTCGAGATGCAGGCCCTGCTCGAGTACATGTACACCGGTGAGGTTAACGTAACGCAAGCGCAGATCCCGCGCATCATGAAGATCGCCGAGCAGCTGGAGGTCAAGGGCCTGTTTGACATGGCCGACCTGAAGGGTCGCTTCGAGAAGATGGTGGTCGAACGCGAGACGGAGTTTGCCAGCAACAACAACTACGCCAGCAAGTCGTCGCAACCGCCGGTCAGTGAACAGTCCCAGCAGCAGTCGTCACCCCCGGTGATCTCGACCTCCACGAACGTCTCGATCGCACAAAGTAGCAGCTCATCCCCGCCGTACACGTACAAATCCCCCTACACAAGCCTGTACTCACGCACCAGCCCCACGGCAATCGAGCGGGAGCGGGAACGTGAGCGGGAAAGAGATCGTGAACGCGATCATGAAGAACGTGAACGCCGCGATCACTCCTCTTCGTCGACCTACTCGCAGCCGCCACCCCACCAGTCCTACCCCCACGACAACGAACCCCGCCCAGATGACCTCCCGCAAACCTCCTCGgccgcatcatcatcctcccAGCAGCCCCCGCAGAACCTCCGATGGCCACTACCCGGTCAGATCCCGGTGACCCTGCACCAACCCCATCAACCCCTGCACAGCATGCTCAGCTCCGTGTACGACTCCAGCTCGGACATGAACCCCCTGAAGCGCAAGAAGCTCCAATCCATGACGACCATGCTGCGCGACACCCCCATCCTGAGGAACGTCCTCGCCCAACCGAACGCCGCCGACTCCTCGCAAAGCTCGCCGTCCCCGCTCTCGCTCCAGCCGATGCCCGGCATGAAGCCGGAAGCGGGACCTGCCACCGCCGGCGGTCATCATCACCCGGCCGATCTCACCAGCAGTCACCACTCCAACGGTGGAGGTTACAAGCACCACAAGGAGCCCCTCTCGCCGTACGGTGACAAGTCGTACGACGACGATGCCCTGCTCGACTCGCGCCTCAACTACAGCGCGGACGATGCCCGCCTTGCATCGTACGTCCCACACCAGCAGCAGAAGCCCGAGTGGAAGCGCTACAAGCAGTACACCCGCCAGGACATCATCAACGCGATCGAGTGCGTGCGCAAGGGCATGAGTGCGCTGCAGGCTTCGCGCAAGTTTGGCGTCCCCTCGCGCACCCTGTACGACAAGGTGAAAAAGCTGGGCATCACCACCGGCCGTCCGATGAACCGAGCGATCAAGCGTAGCCCCAGTTCCGGCGGTAGCCCGGCGCCCTTCCCGTATGGTTTGAGCGGAGCGTCGCACATGTTCGGCGGCGAGCAGCCCATGCCATCGCAGTCCCAGATGCAGCAGCACCGTGACGAAGAGGACAAGAACCGCATGATGAAGATGGACCACTCGGGGCACCATCTGCCTCCGACGATCCCCCATCCGGCGGCGGCCCTGCTCGATCCGTCCTTCCTCCAGCAGGCTCTGGAGGCCCGCGGTGGAGACATCGCCGGACGTGAAGCCCTGCACGCCATGGCTTTTGCCGCCGCAGCCCATGCAGCGGTCAACGGTATCAACACCTCGCCGGGAACCCACGGCACCGCTCGCTCCCCAAGCCCGAACGTACTCATGAAGTACATGCGATCGGCAATGGGATCCCCGGAGGATCGCGATCACCACCCGCGGGACTCGAGCGAAGGTGACCGACACCACCACAGCAACGGCTCCGAGGTGTACGATCGCTCCGGAACCGAGCGGGACTCGATGGATCACGAAGATCCGCGGGACGTGAGCGGCGGCGGAGACGATCTCGTCGAGGATCTCTCCATGGCCCGACGCGGAGGTGCTGGCCCAGATTCGGACCGTGGATCGGTCCCGCAGCCCATGCCCTCgagccaccaacaccacccctCCGTTCTGTCCATGCCCCCGCAGCAAGGTTCCGTGATCGTGCCGGCCCCGCCCAAGATCAAGGACGACTACAACCCGCTCAACATCAAGCGCGAAATCATCGCCGACAGCAACGCCGCTCCCATGGAGTCGTCGTAA
- Protein Sequence
- MGSSEAQTYCLRWNNHKSNLVEILDALIKMECYVDCTIVVDEQKQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVAAFEMQALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLFDMADLKGRFEKMVVERETEFASNNNYASKSSQPPVSEQSQQQSSPPVISTSTNVSIAQSSSSSPPYTYKSPYTSLYSRTSPTAIERERERERERDRERDHEERERRDHSSSSTYSQPPPHQSYPHDNEPRPDDLPQTSSAASSSSQQPPQNLRWPLPGQIPVTLHQPHQPLHSMLSSVYDSSSDMNPLKRKKLQSMTTMLRDTPILRNVLAQPNAADSSQSSPSPLSLQPMPGMKPEAGPATAGGHHHPADLTSSHHSNGGGYKHHKEPLSPYGDKSYDDDALLDSRLNYSADDARLASYVPHQQQKPEWKRYKQYTRQDIINAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRAIKRSPSSGGSPAPFPYGLSGASHMFGGEQPMPSQSQMQQHRDEEDKNRMMKMDHSGHHLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGINTSPGTHGTARSPSPNVLMKYMRSAMGSPEDRDHHPRDSSEGDRHHHSNGSEVYDRSGTERDSMDHEDPRDVSGGGDDLVEDLSMARRGGAGPDSDRGSVPQPMPSSHQHHPSVLSMPPQQGSVIVPAPPKIKDDYNPLNIKREIIADSNAAPMESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00400740;
- 90% Identity
- iTF_00400740;
- 80% Identity
- iTF_00401859;