Basic Information

Insect: Culex quinquefasciatus
Gene Symbol: bab1
Assembly: GCA_015732765.1
Location: NC:180068398-180423269[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.4e-17 3.3e-14 52.0 0.0 1 43 462 505 462 507 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.4e-17	3.3e-14	52.0	0.0	1	43	462	505	462	507	0.95

Sequence Information

Coding Sequence: ATGCCCTCGGACACGCCACCACCGATCCACCTGTCACCGCACGGGTTGGACACGGAGCGCCGTCCGGCATCGGTTCCCTCAGCCATCGCTGGGTTGACTGGATTTAAGCGAAGCAGTCTGCTGGACAAATCTTCCGAACCCGTGCTGAAGCCCACGATGAACCAGAACCAGCAATTCTGTCTTCGCTGGAACAACTATCAGACCAACCTGACCAGCGTATTCGATCAGCTGCTTCAGAATGAGTCCTTCGTTGACGTAACGCTGGCCTGTGACGGTCAGTCCATCAAGGCACACAAAATGGTCCTGTCAGCGTGCAGTCCCTACTTCCAGACGTTGTTCTTCGAGAACCCCTGTCAACATCCCATCGTAATCATGCGGGACGTCAAGTGGCCCGAACTGAAAGCCATTGTCGACTTCATGTACAAGGGTGAGATCAACGTGAGTCAGGACCAGATCGGACCGCTGCTCAAAATAGCTGAAATGCTGAAAATCCGTGGCCTGGCCGACGTCAACGGTGACCAGGAGCTAAACCAAATCGAAAACCCAGAGCCGTCGGCAAGTGGCACCGAAGAGAGCAACTCCAACAACAGCTCCCTTTCGCGGGAATTGGCCAAGACGCTCGAGAGCCGTCTCAACCACAGTGACCCGTCccacaataacaacaacaacaataataaCAACACGCCGAGCCACATGCCCAAAAAGCCGCGAACGTCGCGCGACCACCAGCGTGAAATTTCAGTCCGGGACTTCCCCCGCGACCTGTCCCGGGACATGTCCCGTGAGctgaacgctgcagcagctgccGCGGCCGCAGCTGCAGCGGCGGCTGCCGGCGAGTGGCCCCTGGGTTCGGGCCTGGACACCGTGCAGGCCTCCACGCCCAAGAGCAACCGCAAGCGGCGTTGGCCCTCGGGCGAACGGAGCAGCGTGGGCAGTCCGGCCGACAGTACGCCCGATCAGCTGGAGGTGCCGTCGCCGCTTCCACCGACACCGTCCTCGCAGCAGTCCCAGTCCGGGGGTCCCACCGGACCGCCCCAGTTTTCGATTCCCCCGGCGCTGGACCAGTCGGCGCTGGCCGGGCTGTCGTCGCTGTCCACCATGACGAACCATCCGGACGATATGGAGATCAAGCCGGGCATCGCCGAGATGATCCGCGAGGAAGAAAGGgcGAAACTGCTCGAAAACTCGCAGGCATGGCTAGGGGCATCCACGTCTTCGATCACTGGCACGAATCTGCTGAAGGAAGCTGCCTGCACACCACCCACAACCTATGCCGAGAGCTACCAGTACCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACAGCCAGAACCTGATCCACCATCTGCGCTTTCGCGAGCGTGGCCCGCTCAAGTCGTGGCGCCCCGAAACCATGGCCGAGGCCATCTTCAGCGTCCTCAAGGAGGGCCTGTCGCTGTCGCAGGCGGCCCGCAAGTACGACATTCCGTACCCGACCTTTGTGCTGTACGCGAACCGCGTCCACAATATGCTGGGGCCGTCCATCGACGGGGGAACCGACCTGAGACCGAAGGGCAGGGGGCGACCCCAGCGGATCCTGCTCGGCATCTGGCCGGACGACCACATCAAGGGCGTGATCAAGAGTGTGGTTTTTCGCGAtaccaaagaaatcaaagatgACTCCATCCTGTACGGCAGACACTCGTTTTTAGaggcaattttcaacaaaaacagTAAATCAGAAAAATTAGATAAGGCGCCAACCACAAATGACGAAGCATTTTATCAAGAAACACCCTTCCCGTTCCAAGACAACCCACTGAACTACGCCCCAAACGCTAACGGTCAGCTGCAGCCGGGCGTTGCCGGCGCTGGCCCGACCGACGGGATGACACAGGACGCACTGACGGCGGCAACGGTGGCCGCCGTCCGGCAACAGATGTGCAACATGGTGGCCGCCGCCCAGCACCACCCGGATGCAGCCGCAAATCTAGTGGGGTTCAACCTGCAGCCGCCACATCCCCACTCGAACCTCAGCATCCATCCGTCGGTGGGAAATAACGGTGCCGGCGGATCGAGCGGCATTCCGGTGCCCAAGCTGGGCTCGCCGGCCGTCCACAACAACAACGGCGGCGGAGGTGGTGTAGGCGGTGGCATCCAGATGCCACGGCTGGGATCCCCGGCCGGTTCCAGCTTAGCGACGACAACGACCCAAGGCAGCAAGGAGCACGATCTGCAGCAGCACCTGCAACACCACGGTGGCAACGTTCCCTCGAGCACTTCAACCAACAGCCGTGGCAGCAATTCCCACCCCAGCTCAAACCACCATCCCCACCATCCGTTGGCCCACCTCAACAGTGGCAGTCTCAGCATAACCCGGCTCGGATCTCCGGCGTCCGCCCACGATCTCCGTCTGTCCACTCCCCCGACCGAGGACCGGAGCCCCCTGCCCTCTCCCATGGCAATGATCCTTGAACCCGCGGTCAACTTGGCCGTCGGAGGAGGACCCATCCCAGCATCGAACCAGCAGCAACACCACCAGCACCACGCCGACCATCTGAACCAGACCGGGCCCGGCGGAATGCCCCCGGTgtacggcagcagcagcaagtctTCGTCCCGGGCCGGctattcgtcgtcgtcgtctccaCCGCGGCCCGAACATCTCTTCCAGGACCAGGACCTGACCGAGCTGGTTGCGGCCCAACGAAACGCGGCCCAAAAGGACGCGTCCTCGTCGTCGGCGGCAGCGGCGTCACCTCGGCCGGCCATCAAGATGGAACCGATGACGGAGTGCAGGGCGGATTAA
Protein Sequence: MPSDTPPPIHLSPHGLDTERRPASVPSAIAGLTGFKRSSLLDKSSEPVLKPTMNQNQQFCLRWNNYQTNLTSVFDQLLQNESFVDVTLACDGQSIKAHKMVLSACSPYFQTLFFENPCQHPIVIMRDVKWPELKAIVDFMYKGEINVSQDQIGPLLKIAEMLKIRGLADVNGDQELNQIENPEPSASGTEESNSNNSSLSRELAKTLESRLNHSDPSHNNNNNNNNNTPSHMPKKPRTSRDHQREISVRDFPRDLSRDMSRELNAAAAAAAAAAAAAAGEWPLGSGLDTVQASTPKSNRKRRWPSGERSSVGSPADSTPDQLEVPSPLPPTPSSQQSQSGGPTGPPQFSIPPALDQSALAGLSSLSTMTNHPDDMEIKPGIAEMIREEERAKLLENSQAWLGASTSSITGTNLLKEAACTPPTTYAESYQYQLQSMWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKSVVFRDTKEIKDDSILYGRHSFLEAIFNKNSKSEKLDKAPTTNDEAFYQETPFPFQDNPLNYAPNANGQLQPGVAGAGPTDGMTQDALTAATVAAVRQQMCNMVAAAQHHPDAAANLVGFNLQPPHPHSNLSIHPSVGNNGAGGSSGIPVPKLGSPAVHNNNGGGGGVGGGIQMPRLGSPAGSSLATTTTQGSKEHDLQQHLQHHGGNVPSSTSTNSRGSNSHPSSNHHPHHPLAHLNSGSLSITRLGSPASAHDLRLSTPPTEDRSPLPSPMAMILEPAVNLAVGGGPIPASNQQQHHQHHADHLNQTGPGGMPPVYGSSSKSSSRAGYSSSSSPPRPEHLFQDQDLTELVAAQRNAAQKDASSSSAAAASPRPAIKMEPMTECRAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00400704;
90% Identity: iTF_00400704;
80% Identity: iTF_00401831;