Cpip003512.3
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- grn
- Assembly
- GCA_016801865.2
- Location
- NC:104502118-104729701[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-19 5.3e-16 58.4 4.7 1 35 382 415 382 416 0.98
Sequence Information
- Coding Sequence
- ATGGATATGACATCGGCGGCGGAGGCTCGAAGCTGGTATGATAATCAGCGACTTGCGGCATCGCCTGGCACTACGGCCGGCTTGGGTGGACACCAGTCGGTTGGAGCCGGGATGGACCCGACTGAAATGAATCCGTTTTACCCGCTCGAAAATGGTTCCCACCGGAGGTATTACCCCACCAGTTATGCACCGCACGCATCCCGCATGTCCAACTCGCACGTGACCTCACCGCAGGTGTGCCGACCGCACCACTTTCACGGGCCCCTCTCGTGGCTCAGCGATCCGACGGCGACCGCGTCAACGTCTCTGACCAAACCTGCCATCGCGTCCAGCAGCGGCGTGTCGTGGGGCAGTCCGTTCGCCTGTCCCCAGGACCCGCAGGACAAGCTTAGCCAGGCCATGGCCATGGGCGTCTCCGGCGGAAGTGGTCAACTGGGTGCGGCTGCGGCCGCCGGTCAGCTGCTCGGCGGAGGTAGCAGTAGTGGCTTCTCGTTTCCTCCGACCCCGCCCAAGGACTCAACGCCGGACTCGGTACATACCGGGCCTACCGAGTACCAGGCCACGATCAACGCCTTCATGCAGCATCAGGCCCAGGTGACGTCCAACAGCTTGGCGGCCCAGCAGGCGGCCGCCGTTGCCGCCCAAGATAGCTGCATTCTGGACGTGAAGCCGTGCTTGACGGGGAACGGGTCCCTCGGAGGGTCGGGACTTACGGGGAGTAGTCacagtggtggtggtgggagtGGAGGGACAGGGTCTAGTGGAAGTGTTGCCAGTGTTGGCGGTGGTGGTGCAAACGGGAGTGGTTCCAGCGGTTCCAGCAACGGACAGAACCAGCCAAAGCAGCGGGAAGGTACGACCTTGAACGGTTCTGTGATCGGTTCTGCTAGTAGTGGTAACAACAGTGCACTGTTTGATTCGTCCGGCCACGGGTCGTACGGTGGCCATACGACGGGATACGATACGACGGCGGCCAGCTATGGTAGCAGCTATGGCCATCACCAGCAAAGCGGTTCGTTTCATCCAAACGTTTCAAGGGCGACCTCCGGTATGACCGGAGGGGGTGGGTCGCACATGAAGTCGGCGTCGTCGCAGATGATGTCGACGAGGACCAAGGCTCGGACCACTGCCGAGGGTCGCGAGTGCGTCAACTGTGGGGCCACGTCGACCCCGCTGTGGCGAAGGGACGGCACCGGCCACTACCTGTGCAATGCCTGTGGGCTGTACTACAAGATGAACGGCCAGAACCGGCCGCTGATCAAGCCCAAGCGAAGACTGGTTAGCGTAAGTACACCAACGACGTTTGGTAACGAATCTCTAGCGGTTggaaattgtttgaagtttgccTAA
- Protein Sequence
- MDMTSAAEARSWYDNQRLAASPGTTAGLGGHQSVGAGMDPTEMNPFYPLENGSHRRYYPTSYAPHASRMSNSHVTSPQVCRPHHFHGPLSWLSDPTATASTSLTKPAIASSSGVSWGSPFACPQDPQDKLSQAMAMGVSGGSGQLGAAAAAGQLLGGGSSSGFSFPPTPPKDSTPDSVHTGPTEYQATINAFMQHQAQVTSNSLAAQQAAAVAAQDSCILDVKPCLTGNGSLGGSGLTGSSHSGGGGSGGTGSSGSVASVGGGGANGSGSSGSSNGQNQPKQREGTTLNGSVIGSASSGNNSALFDSSGHGSYGGHTTGYDTTAASYGSSYGHHQQSGSFHPNVSRATSGMTGGGGSHMKSASSQMMSTRTKARTTAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSVSTPTTFGNESLAVGNCLKFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -