Cpip008704.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- ncor1
- Assembly
- GCA_016801865.2
- Location
- NC:121080381-121178911[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-05 0.038 14.6 0.0 3 43 494 534 493 536 0.97 2 2 0.00013 0.1 13.2 0.0 5 45 1279 1318 1276 1319 0.93
Sequence Information
- Coding Sequence
- ATGGAAGCGGCTATACGTTCTGTGCAGCAGGTTGGGCCACCAGGCCAGAGGGCCGACACTGGCCCTTCTCCGCAGCCTCCCCCAACGATGTCATTTCAACAGCGTGTGCCACCAGGTGCTGCGCAAATTCATAGATCTGTTGACGCGTCCCAAAGTTACAGCAGAGGGGGCCCATCGCCGTCTCAGTCCGCCCCCCGGTCGGCAGCTAGTCCACTCTCGCCACCCCGGCCCGGTCCGGGAGCGGGAGCCGCGAATTATCCACCATTCGCAGGAGCACCCGCACGCGAGGCACCGCTTAGGTATGGGCCGAACAACTCGTACTATCGGGACAACCCCTACACCCGCGTGTCACAGGTACCACAGGTTTCCGAGTACCATCGATCGGTGCCGGTGGTTTCGGTCTCTAGTAGCATACCCGCCCCTATTAGTATAGCAAATTCCATGGAGCCAGTACAACAACAGCAACCTACTAGACACCGGATGTCCCTGTTACCCCACACGCCCGATTACCTGCAGGGGCGGTCTGCGCAGCAATCGCAGTCGGCCCAGTCGGATTCCGGTCCACCTGCATTTAAAAAGATTCGCCTGAACGACACCAGCCAACCTGCGCAATCCCCTCTGAACGTTGATACACGTGATCCACCGGTCTCTTCCGGTGCGTATCATCCTCAGGTGGAGGCGATCTCACCCACGCTGCCAAGCGATCCGACTGAAGAGCTGCGTGCCACCAAGGACGACCTGTTACAGCAGATTGCCAAGGTGGACATGGAGATCGACAAGGCGGAGAAGAAGATCGCCATGCTGAAGAAGAAACAGGAATCGCTCGAAGAGGCTTCGTTGAAACCGGCCGTCGAGGAGAGTGCCGCCGAGGCGCAACCCAAGCACCGCAGCTTAGCACAGCAAATCTACGCCGAAAATCGGAAACGAGCTTCGACGGCGCACGCTGTCCTGAGCGCGCTTGGCACTGCCACCGATCTGCCGCTGTACAATCAGCCGTCCGATGCGGAAACCTGCCGCGACATCCAGGACCGCCACAAAACGTTCCGGCAGCATCTGCTGGCGCATTTCAAGAAGATCAAATCGGAACGGGCGGCCAAACAGGTCGAACTGACTGAGCGGTACGCGCAGATGTCGCAAGACTGGTCCAAACGTGTAGATAAGATGGAAGCGAGTGCAAAGCGGAAGGCGAAAGAGGCGAAGAACCGGGAGTTTTTCGAGAAGGTGTTCCCCGAGCTTCGAAAGCAGAGGGAGGATAAAGAGCGATTTAATCGTGTAGGTTCTAGGATTAAATCCGAAGCCGATCTTGAAGAGATCATGGATGGTCTTCAGGAGCAGGCGATGGAGGATAAAAAAATGCGTTCATATGCTGTGATTCCACCTTTAATGTTAGACTCCAGACAAAGAAGGCTAGTGTTTAATAATGAAAATGGAGCGCTAATAGATATGGAAACAGAATTCAAGGAACGGTTAAATTTGAATGTGTGGACGGTTGGCGAGAAGGAGGTTTTTCGGGAGAAATTTTTGCAACATCCGAAAAACTTCGGTATGATTGCAGCCAGTTTGGATCGTAAATGTGCGCAGGACTGTGTGCGATATTACTACCTCAGTAAAAAGGCGGAAAACTATAAGCAGTTGTTGCGAAAGTCTAGGCAGCGGACACGGAGTTCGAGGAATATACAGAAAACCAATCAAAATCAGACGCAGTGCATAGTAGATGCATTAACAACTGGTGTTACAACAAGACTACAAcgtgaacaacaacaaaagactgTAGGCCGTGATCGTGCCGCGAATTCAACAAATAGTTCAATAGGAAATAGTTCGGCATCTAATGTCACAACAAATTCATCTTCAAATATTACTAATAACAATAATGGTAGCAGTAGTAGCAGTAGTGCAAATAGTATTAGCGTGAGTAACAACAGCCCGCAACAGGCGAAACACGATCAGCCGCAGCCAAGTGCGACTTCTGGAAGCACAACGGTTACGACGGCGTCTGTGGCGACAGCAGCACCAGTAACCAGCAGCACGGTAACAACATCTACGGCATCTCCTCCCTCGTCATTGTCAACGGTTTCGTCATCCTCGGCATCAACGACGGTGACGACTACGTCAGCGGCGGGTTCGACTCCATCGTCCACATCTGCGACTAGCATAGGAAACAGTACCAGCAGCAACTCCAGCAGTACCATCTCGAGTAGCAATGGCACGACGAGTACTAGCGAAAGCAGCAGCAGTGCGACGTCAGTTGTTCCGGGCAGTGCGGAAAGTGCGACGGAAGCTATCGCCAGCAAGGATGAGACTAGCAAAGATAAGCAAGCAGCTGGTTCTGATGCGACTGTGACGTCTCAACCTGGCCTGGTCGCGCCTGTTACGGAGAATAGTACTACTGTACCTACTATTACGACTACTTCCACAACTGCCACTGTATCGACAGCAGCGAGCACGGCACCCGGCACCACGAACGCAAGTTTATCGCGAAGTGCAACGCCTTCATCCGCAGCAGTTCCAACACCTCCATCGATCACCtcctcctcgtcgtcgtcgttgtcttcATCGGTATCGTCTTCGCCCAGTATATCGTCGTCCGGCATCGCTCCGACGTCGACCATCTCATCGTCCGTTGCGGCCTCACCATTGTCTGTCTCATCAAccatcatcagcagcagcagtagcagtacCTTGGCCACGTCTGTCAGCAACACAGCAAGCAGTATCAGCGTGACTAGCAACAGCAGTAGTAACAGCACCAGCATCGCGAACAACATCGGTGGCCATCCGCTGTCGAGCGTAACTGCCGTGGAAACGTCTTTTGTACCTAATTCTAGTAGCTCTAGTATATCTACGATTCCGCTGAACGGCGTGAAAACGGACGTACTAAACTCGACCACGGTGACCGCCACGACGGTCGCGGCGACGACGcccctcaacaacaacaacaacagttaCGGCGGCGTTGGCATCaatgtaaataatgtaaattcaaCCATGCCCAACCTAACCCACGGCTCAGTACCAGTTACGCTTACGGCAGCGGCGGTCCCGGGCGGACCGACGTCGATGCCGCCCAGCTCACAGCCACCATCGCATTTACCCTCactgcaacagcagcagcagttgttCAACAATACGACCAGCACGCCCAAGAACGCGTCCTCGGCGGCCTCGTCGATGGAGATCATCATCAAGGACTTTACGCTGGAGACGCTCGTGTCCAACGTGGTGAAGAAGAAGTTTGGCGTCAAGGACAACAACCTGCTCAAAGACGAACTGGAACCAAGTGATCCTAAAAAGATGCGGTTAGACCTTGATGGCATCAAGGACGGCAGCATCAATCAGGACGGCAAAGACAAAAGTGGTCCGCTGCACGCGTGTTTCGTATGCAAAACCGAGCTGTGTCCCCGCACGCGGCCCCTGGAACGTGGCCGCGGTGCCCAGTACGGCATCCCGGAGGAGGCGATACCGCCGGGGGCACGCGTTTGCAATACGTGCCAGTGCAAGTCGGTCAAATCGAGGTACGACCCGTCGCAACAACAATATCCCAATTACACAACAAACCCCCAACAACAACTCGGTCATGGCAATCAATCATCATCCGATCAATCCGTCCATTCTTCTAGATACACGCACTGTCCGCTGCCGACGTGTCCCAATCCGAAGGATCGCGTCAAGCGGTTCCGCAATCTACCGCCGCGGCTGTTTGAGCTCGCGCCGGAGATTCGCGACCCGATCGTGCAGGAGCTGCAGATTCCGCCGAACGTGAGCAAATGCTGCACGGCCTGCCTGACGCGCATCCGGCGCAAAATGGGTCCGCACCTGTTTGGGACGAATCTCACCGACGACGAGGTGGCCCGGATGAAGAAACTGCTCCAGGACGTTGGCCCCAAGTGGAACCAGCTGGCGGAGGCGCTGAACAAGACTCCGGTCGCGCTGAAGAGCTTCTACTTCCACTACAAGAAAAAGTGCGGCTTTGACGCGGCCGTAACGGAGTACTACAAGCAACATCCGGGCGAGGATCGCCGGCCCGCGATGACCGACGGGGACGAGTCCGATCTGAGTGCGTCGTCTTCGGACGAACGGGACGGCAGCAGCGATACGACGGCCTCCGCCGAAAGTCCAAACAATTCAGTCCCACTGAACGTGACAAAGGACGAAATCAACACCGTGCCGGAAGCGCTCGCTCCTCCTCCCCTCACAAAGTCCTTCGACGACGACCTCCGGTTGCTGCCTCCGGGTCAACCTCCGCGGAAGCAAAAACTCACCGAAGAGTACGACAGCTCGGCGACGGAAACGGCCGACGAAGAGAACGAAACGTCCCCGGCGAATCGACAAAGTCCCAAGGTGCACTATCCGCCGATGAATCCGGTCATTTCCGTGCACCATCCGCTGCAGAACGGACCGCGACTCGGCGAAGTTGGCTCACCGCAAAACGTGCGAGACGCCATCCAACACGTGATAGAACGATCGCTCAAGTCCAACAACATGATGTCGGGCTCGGTGAAGCCACCGACGATGAAACCCATGAACGATTCTCCGTTCGTGCGAGACTACCGAGACCTGTCCAAGGGACCACCTCCTCCGACGTCCATCCAACGCTCCGAAGGAATGGCCACCCTTTCCGTGGTGAACTCTCACGCTCCCCACGGTCAGCTCATCTCCCATCATCCGCACTCGATCGGATCGCAGATCCAAGCCACGATCACCCCAGTTccgcaccagcagcagcagcaacagtcgGGACCACCTCCGACATCTCAACCGCAGCCACCACCATCGTCACAGTCGGTCAGCTCCAGCGAAAAGGACGTCCCGGTGGTGTTCCTCCGCGACCCGGAACCACAAACGCTCGATCTCAGCATCAAAAAGCCCCAGCGGGACAATTTCCCACCGCCGGCGCACAACAGCAAACCGCCCAGTCTGGCGTCCACGCAGGGCACGCTAACTCTGTACACCCACGGATCACGGACGGAGTTTCCCCCGCcgagccagcagcagcaacaaaacATTCCAACGCACGGAACACCGTACGGATTGAGCTTCCACGGCGATTCGATGGGACGGCCGTCAAAGTCCCCGTCCGGCTACATTACCACCCTCTCCGGAGGTCCGACGCTGACGCTGAACCAGGGCGGCGGTCCACCGAATCAACCCCCGAATTCCGTCATCGGAGGACGGGGTGGGCCgatgcagcagcaacagcacacGATCTCGCTGACTCCGCCGCCGATGAAAAAGTCCAACGCGCCCAAACTGAGCCCCAAAATGCAGCCCCAacaccagcaacaacaagtGCAATCCGGAATGCAGCAACCTCCGCCGCAGTCCGCCCACGGTGGTGGTCCCAAGGGATCGATCACCCACGGAACGCCGGTCAACGCCGCCGGCCAGCAGATCATCATCCAGGGTCAAACCACGCTCAGTCCACGGTACGACAACATGCTTCGGCAGACGCCGCCCTCGTCCAACGACAAGCACGGCTCGATCACCCAGGGAACGCCGGTTCATCTGTCGCACGCACTGCCCGACAAACGGTCCGCGTACGAGTACAAATCCGCGTACAACAACCGACAAAGTCCGGCCCAAGTGTCGCAACCTCCACCCCAAGGCAGCCCGCAGGCACCACCACCACAGTTTGCCTACTCGAGAACCGGGCCGACCTTTTCGCTGGAACCGCCACCGCCCCAGTTCAGCTCGCAGCAGATCATCATGAACGACTACATAACCTCACAGCAGATGCAAGGCCGAAACGCCGGCTCTGCTGGTGGTTCCAGTGGCGGCGGTGGCCGGCCAGAAAAAGAATCTCCCTCTCCGCGCAGCGTTCCAACCAGTTCGCCAGCGTCGCTACTGTTCTCCGTTCCCGACCGGTCCGACCGATCCTCGCGGCCAGAGTATCTGAGCCGGGCGTCACCCGCCGACCACGTCAACCGGGTTTCGCCCGTCTTCAGCACTCCGAGCCCCCATCGAACACCTCCTCCACCCCAGCGGCAAGGAGTCATCCAGCGGCACAACACCGGAAGCGGTGCCAGCGGCGGAATTGGCAGCAGCAACAGTGGGGCCGGTTCCAAACCACCAAGCCCGGCGCCAAATCGGCTGCACCTGGTGCCACCGCCGTCCCATCACTACATGTCAGGACACGACGCATTTACCTCGCTGGTTGACCTAGCCGTACAGCAGCAACCGATGACGGTGCCGCACAAGGACGAGAAGCGACCCTCGATCGctgaacagcagcagcagcagcaacaacaacagcagcagccacCTCCACCGCCTCCGACGCATCACGACATCCGGTACCATCCGGCCGCCATGATCCAGATCCATCACCAGCAACAGCAAGCGGTCGCAGCTGCAGCCGCGGCAGCCGCTgcccaacaacagcagcagcaacaccagcaccagcagcatGCGGCGGCCGTGGCTGCGGCCCAGCAACAACACGCTGCTGCGGCGGCGGCAGCAGTcgcccagcagcagcaacagcaaatcCAGCGACAGCAACAGATGGACCTCCAGCGTCGACAGGCCCAGCTGCATCCGTCgatccagcagcagcaccagtcgGCGGCGCTCGCCTACCGGGAGCAGCAGATGGAGCGTGATCGGGAGTTGAACTATCGCATCGAGCGAGATCGCCAACAGGCGGAGGCCGAGAATGAGGATCGACGCCGGAGGCAGCAGCAACGTGAGCGGATAGCTCACCAGGAAGAGGAAGATCGCCGCCGGAAGCATTACGATATGATCAACGAGCGAATGGAGAGACCAATGGAGACGATCGGTATACGCTCGTCGTCGGACGGATCGCTGACCGCGGCGAACCTGATTGACGCGATCATCACCCATCAGATCAATCAGACCGCTTCGGAGCCACCGTTTCCGCCCAGCCGTGACATGCAGCGGCCTCCCTTTTTCCCAACGCGTGATCACCGGCCCTCGCCCATCTCCGAAAACAACGGAAAGTCACACTCGCCGAACGTGATCAACATCGACGTGGACTCGGAACCATCGGTCCCAAGAACCAAGAACATCACGATCGGCGAGCTGGCCGAGAGTATAATCGCGAAGGACTACTCGCCCAACCCGatgccgttcctgcagctgcgTCAGTCGATGATGGCTGGACCGCCAGGTTCTGGTCCTCCCGGCGGGTTGGATCCGGCCGCCATGGGGGCACCGGACGCGTGGAAGTACCGTCGGATGGCGCCGGGAGGTAAGGACGATCATCCGCCACCTCCTCAGTCTGCCGCtcagcaaaaacaacaacagcaacaacatcagcagcaacagcagcagattCACCACCAGCTGCAGATGCAACAGGCGgcccagcaacagcagcaacaacaacagcagcagcagggtcCACCTGGTCATCAGTACATGCATCCctcgcaacagcagcagcagcagcaacagcaacaacaacaccatcaacaacagcagcagcaacatcagATGCAACAAAACAAGGCTATGGGCAGATCGGCCCAACCCGACGATCGTCACATAATCCGAATGGCACAGTCGCCGCGACCGCGCAACAAGTTCCACGAACCTGTTGGCCAGCAGGACGCGCAGTTCTTCCATCCAGGAGCTCCGCTAAGCCGCGGTCCGCGAGACTTTGCCCTCGATTGCTACGTCAAGAACCGAATCGTCGAAGCGATGCGAACCGAAGACGACAAACGTGGGGACGACGGCCGGGAtcaccaacagcagcagcaacagcagcagtcgTCGCGTAATCCTTCGCCGgcccagcagcaacagcagcatggTCCTCCACCGCCGGCTCACCACAACAAAGATCACGACCGCAGCTCAACGCCCGGCGACATGATGATTGACGAGGAAACGGGTCGTCCGGCGTCCGGTGGAAACCATCATCGCCAACCGCCGTcctcccagcagcagcagtctctGCCTCCTCACTCGCAGTCGTCCCAAGGAGGGGTCGTCCACAACTCGCTCCACTCGTCGCCGTACATGGGCGGCCAACCCGTGCCGGTGACGACGTTCCCTCCGCAGACCTACTACCCGTACAGCGCCCTGACGGTGTCGGGTGGTCCCGTGACCGTGGGCAGCCTCGGACCGCCGCCCGGACATGGCCCGAAGGTGTCGTCAATGGGTGGAGTACAGAACATGGGCGGAGGTGGCCCCGGCGGTGGCGGAGGAATGAACGACGACCGGCAGcagtcttcgtcgtcgtcggtcgccATGGAACCGAAGCCACTGCTTTCGGCCCAGTACGAGGCACTCAGCGACGAAGATTAG
- Protein Sequence
- MEAAIRSVQQVGPPGQRADTGPSPQPPPTMSFQQRVPPGAAQIHRSVDASQSYSRGGPSPSQSAPRSAASPLSPPRPGPGAGAANYPPFAGAPAREAPLRYGPNNSYYRDNPYTRVSQVPQVSEYHRSVPVVSVSSSIPAPISIANSMEPVQQQQPTRHRMSLLPHTPDYLQGRSAQQSQSAQSDSGPPAFKKIRLNDTSQPAQSPLNVDTRDPPVSSGAYHPQVEAISPTLPSDPTEELRATKDDLLQQIAKVDMEIDKAEKKIAMLKKKQESLEEASLKPAVEESAAEAQPKHRSLAQQIYAENRKRASTAHAVLSALGTATDLPLYNQPSDAETCRDIQDRHKTFRQHLLAHFKKIKSERAAKQVELTERYAQMSQDWSKRVDKMEASAKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMLDSRQRRLVFNNENGALIDMETEFKERLNLNVWTVGEKEVFREKFLQHPKNFGMIAASLDRKCAQDCVRYYYLSKKAENYKQLLRKSRQRTRSSRNIQKTNQNQTQCIVDALTTGVTTRLQREQQQKTVGRDRAANSTNSSIGNSSASNVTTNSSSNITNNNNGSSSSSSANSISVSNNSPQQAKHDQPQPSATSGSTTVTTASVATAAPVTSSTVTTSTASPPSSLSTVSSSSASTTVTTTSAAGSTPSSTSATSIGNSTSSNSSSTISSSNGTTSTSESSSSATSVVPGSAESATEAIASKDETSKDKQAAGSDATVTSQPGLVAPVTENSTTVPTITTTSTTATVSTAASTAPGTTNASLSRSATPSSAAVPTPPSITSSSSSSLSSSVSSSPSISSSGIAPTSTISSSVAASPLSVSSTIISSSSSSTLATSVSNTASSISVTSNSSSNSTSIANNIGGHPLSSVTAVETSFVPNSSSSSISTIPLNGVKTDVLNSTTVTATTVAATTPLNNNNNSYGGVGINVNNVNSTMPNLTHGSVPVTLTAAAVPGGPTSMPPSSQPPSHLPSLQQQQQLFNNTTSTPKNASSAASSMEIIIKDFTLETLVSNVVKKKFGVKDNNLLKDELEPSDPKKMRLDLDGIKDGSINQDGKDKSGPLHACFVCKTELCPRTRPLERGRGAQYGIPEEAIPPGARVCNTCQCKSVKSRYDPSQQQYPNYTTNPQQQLGHGNQSSSDQSVHSSRYTHCPLPTCPNPKDRVKRFRNLPPRLFELAPEIRDPIVQELQIPPNVSKCCTACLTRIRRKMGPHLFGTNLTDDEVARMKKLLQDVGPKWNQLAEALNKTPVALKSFYFHYKKKCGFDAAVTEYYKQHPGEDRRPAMTDGDESDLSASSSDERDGSSDTTASAESPNNSVPLNVTKDEINTVPEALAPPPLTKSFDDDLRLLPPGQPPRKQKLTEEYDSSATETADEENETSPANRQSPKVHYPPMNPVISVHHPLQNGPRLGEVGSPQNVRDAIQHVIERSLKSNNMMSGSVKPPTMKPMNDSPFVRDYRDLSKGPPPPTSIQRSEGMATLSVVNSHAPHGQLISHHPHSIGSQIQATITPVPHQQQQQQSGPPPTSQPQPPPSSQSVSSSEKDVPVVFLRDPEPQTLDLSIKKPQRDNFPPPAHNSKPPSLASTQGTLTLYTHGSRTEFPPPSQQQQQNIPTHGTPYGLSFHGDSMGRPSKSPSGYITTLSGGPTLTLNQGGGPPNQPPNSVIGGRGGPMQQQQHTISLTPPPMKKSNAPKLSPKMQPQHQQQQVQSGMQQPPPQSAHGGGPKGSITHGTPVNAAGQQIIIQGQTTLSPRYDNMLRQTPPSSNDKHGSITQGTPVHLSHALPDKRSAYEYKSAYNNRQSPAQVSQPPPQGSPQAPPPQFAYSRTGPTFSLEPPPPQFSSQQIIMNDYITSQQMQGRNAGSAGGSSGGGGRPEKESPSPRSVPTSSPASLLFSVPDRSDRSSRPEYLSRASPADHVNRVSPVFSTPSPHRTPPPPQRQGVIQRHNTGSGASGGIGSSNSGAGSKPPSPAPNRLHLVPPPSHHYMSGHDAFTSLVDLAVQQQPMTVPHKDEKRPSIAEQQQQQQQQQQQPPPPPPTHHDIRYHPAAMIQIHHQQQQAVAAAAAAAAAQQQQQQHQHQQHAAAVAAAQQQHAAAAAAAVAQQQQQQIQRQQQMDLQRRQAQLHPSIQQQHQSAALAYREQQMERDRELNYRIERDRQQAEAENEDRRRRQQQRERIAHQEEEDRRRKHYDMINERMERPMETIGIRSSSDGSLTAANLIDAIITHQINQTASEPPFPPSRDMQRPPFFPTRDHRPSPISENNGKSHSPNVINIDVDSEPSVPRTKNITIGELAESIIAKDYSPNPMPFLQLRQSMMAGPPGSGPPGGLDPAAMGAPDAWKYRRMAPGGKDDHPPPPQSAAQQKQQQQQHQQQQQQIHHQLQMQQAAQQQQQQQQQQQGPPGHQYMHPSQQQQQQQQQQQHHQQQQQQHQMQQNKAMGRSAQPDDRHIIRMAQSPRPRNKFHEPVGQQDAQFFHPGAPLSRGPRDFALDCYVKNRIVEAMRTEDDKRGDDGRDHQQQQQQQQSSRNPSPAQQQQQHGPPPPAHHNKDHDRSSTPGDMMIDEETGRPASGGNHHRQPPSSQQQQSLPPHSQSSQGGVVHNSLHSSPYMGGQPVPVTTFPPQTYYPYSALTVSGGPVTVGSLGPPPGHGPKVSSMGGVQNMGGGGPGGGGGMNDDRQQSSSSSVAMEPKPLLSAQYEALSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401653;
- 90% Identity
- iTF_00401653;
- 80% Identity
- -