Cpip003413.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- Cdc5l
- Assembly
- GCA_016801865.2
- Location
- NC:101497055-101500081[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-17 6.6e-14 52.3 1.8 2 46 9 54 8 54 0.97 2 2 9.7e-12 7.6e-09 36.1 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGAATCATGATAAAAGGAGGTGTCTGGCGCAACACCGAGGATGAAATCCTTAAAGCGGCCGTCATGAAATATGGCAAGAACCAGTGGTCCCGAATTGCCTCGCTGCTGCACCGAAAGTCCGCCAAGCAGTGCAAGGCGCGCTGGTACGAGTGGCTCGACCCGAGCATCAAGAAGACGGAATGGTCCCGCGAGGAGGACGAGAAGTTGCTCCATCTGGCCAAGCTGATGCCGACCCAGTGGCGGACGATCGCGCCGATTATTGGCCGTACGGCGGCGCAATGTTTGGAGCGGTACGAGTACCTGCTGGATCAGGCCCAGCGCAAGGAGGACGGGGAGGATGGTGGGATGGACGACCCGAGGAAGCTGAAGCCGGGCGAGATTGATCCGAATCCGGAGACGAAGCCGGCGCGGCCCGATCCAAAGGACATGGACGAGGACGAGCTGGAGATGCTGTCGGAGGCGCGTGCCCGCTTGGCAAATACGCAGGGCAAGAAGGCGAAGAGGAAGGCTCGGGAGAAGCAGCTGGAGGAGGCACGCCGATTGGCCGCGCTGCAGAAGCGGAGGGAGTTGAGGGCGGCCGGCATTGGGTTGGGCAACCGGAAGCGCAAGTTGAAGGGCATTGATTACAACTCGGAGATTCCGTTTGAGAAGGAACCACAGGCTGGGTTCTACGACACGACTGACGAGTTTGTCGTTCCGATAGCGGCGGATTTCTCCAGCTTGAGACAGCAGAACTTGGACGGGGAGTTGCGCACGGAGAAGGAGGCGAGAGAGCGCAAGAAGGACAAGGAAAAGTTGAAGCAGAAGAAGGAGAATGACATCCCGTTGGCGATGCTGCAGAATCAGGAACCGGCGAAGAAGCGGTCCAAGTTGGTGCTGCCGGAGCCGCAGATTTCCGATCAGGAGTTGCAGCAGGTCGTAAAGTTGGGACGGGCCAGTGAGATCGCCAAAGAGGTTGCGTCCGAGTCGGGTGTGGAGACGACCGATGCTTTGCTGGCGGATTACAGCATTACGCCGCAGGTGCAGGCCACTCCCAGAACTCCGGCACCCGTCACGGATCGTATTCTGCAGGAGGCCCAGAACATGATGGctctcacccacgtggatacTCCGCTTAAGGGTGGAGTCAACACTCCGCTTGTTCAGTCGGACTTTTCCGGGGCTCTTCCGCAGAGCCAAGTGGCTGCCACGCCGAACACGGTTCTGGCGACGCCATTCCGTTCCGTTCGAGGACCTGACGGGGCGGCCACTCCGGTTGGTTTCCTTACGCCTGCATCCGGTGCAATGGTGCCGGTCGGAGCAACTCCCGGCGGTACCACCCACACGGGAGCCACGCCAAACTTTGTCCGGGACAAGCTGAACATCAACGCCGAAGAGACGATGTCGGTGGTGGAAACTCCCGCCGCTTACAAAAACTACCAGAAACAGCTGAAATCATCGCTGAAGGAAGGTCTTTCCTTGCTGCCGGCGCCTCGCAACGATTACGAAATTGTTGTACCGGACAATGAAACCGACGAAACCGCCGACGACGGATCGGGCGCCGAGCCGATGGTGGCCGACCAGGCCGATGTCGACGCCCAGCGTAAGAAGGCAAAACGTGCCCAAGAAGCGAAAGAACTAGCGCTCCGTTCGCAGGTCATCCAGCGTGAGCTGCCGCGTCCCCTGGACATCAACATGACCGTGCTTCGTCCCCCGAACGAAATGCAAGGTCTAACCGAGTTGCAGCGCGCCGAGGAACTCGTCAAGCAGGAAATGGTCAAAATGCTCAACTACGACGCAGTTCGCAACCCGGTGGTCAATCCGCAAGCCCCGCCCACCAAGAAGAACCCGCTGTCCGCCCATCTGTCCTACCTGGAGCAGCACCCGTACGAAGACATTGAAGAAACCGACCTCGACCAGGCCAAAGAACTGCTGCGCGAAGAAATGGGCGTCGTCAAAACCGGCATGGCCCACGGCGACCTCTCGCTCGAATCGTACACCCAAGTCTGGACCGAGTGTCTCTCGCAGGTGCTCTACCTGCCCTCCCAGAATCGCTACACCCGCGCCAATCTGGCCAGCAAGAAAGACCGCATCGAATCCGCCGAAAAGCGGCTGGAAATCAACCGCAAACACATGGCCAAAGAGGCCAAACGGTGCGGCAAGATCGAGAAGAAGCTCAAAATCCTCACCGGAGGCTACCAGGCGCGTGCCCAAGCCCTCATCAAGCAGTACCAGGAAACCAACGAGCAAATCGAACAGAACAACCTGGCCCTGTCCACGTTCAAGTTCCTCGCCGCCCAGGAGGACCTCGCCATTCCGAAGCGCATGGAATCGCTCACGGAGGACGTGATGCGGCAGACCGAGCGCGAAAAGACACTCCAGAAGCGGTACGCCGCGCTGACCGAGGAGTTTAGGGATCTGTTCCGGGAGGAGTCACGACAGCCGCAACCGGTGGAAACGAGCCGTCAGAACGGACGAGGAGCAGGCGTGCAGAAACGGCTCGAGGAAGAACAGGAGAGCGAGAgtgaagaggaggaggaggaggaggaggaggagcaggCGGTTGAACCTGTGGTTGAGGAAGCGGTGGCGGAGGAGGAAGAAGGTCCGGGAGATCCAGAAGAAAAGGACGGGCGAGAAGAGGAGCAGCAGCCTGAACGGGAAAAACCAGCGGTGGCGGAAGAAGCTGATGCCATGGACTGTCAAGAGGACGAAGATGGCCAGCCGAGTCACAAAGCCTCCTCAACTTCCTCCTTCTTCCACACCCACTATTCCTCCAACCATACCAATTACCACAACCAACACCCCACCCCCTCCAATCCCCCAATACCATAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGEDGGMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGLGNRKRKLKGIDYNSEIPFEKEPQAGFYDTTDEFVVPIAADFSSLRQQNLDGELRTEKEARERKKDKEKLKQKKENDIPLAMLQNQEPAKKRSKLVLPEPQISDQELQQVVKLGRASEIAKEVASESGVETTDALLADYSITPQVQATPRTPAPVTDRILQEAQNMMALTHVDTPLKGGVNTPLVQSDFSGALPQSQVAATPNTVLATPFRSVRGPDGAATPVGFLTPASGAMVPVGATPGGTTHTGATPNFVRDKLNINAEETMSVVETPAAYKNYQKQLKSSLKEGLSLLPAPRNDYEIVVPDNETDETADDGSGAEPMVADQADVDAQRKKAKRAQEAKELALRSQVIQRELPRPLDINMTVLRPPNEMQGLTELQRAEELVKQEMVKMLNYDAVRNPVVNPQAPPTKKNPLSAHLSYLEQHPYEDIEETDLDQAKELLREEMGVVKTGMAHGDLSLESYTQVWTECLSQVLYLPSQNRYTRANLASKKDRIESAEKRLEINRKHMAKEAKRCGKIEKKLKILTGGYQARAQALIKQYQETNEQIEQNNLALSTFKFLAAQEDLAIPKRMESLTEDVMRQTEREKTLQKRYAALTEEFRDLFREESRQPQPVETSRQNGRGAGVQKRLEEEQESESEEEEEEEEEEQAVEPVVEEAVAEEEEGPGDPEEKDGREEEQQPEREKPAVAEEADAMDCQEDEDGQPSHKASSTSSFFHTHYSSNHTNYHNQHPTPSNPPIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00098941;
- 90% Identity
- iTF_00401644;
- 80% Identity
- -