Cpip017948.4
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- ct_1
- Assembly
- GCA_016801865.2
- Location
- NC:181102601-181301258[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-26 2.9e-23 82.2 0.0 3 72 691 761 689 766 0.95 2 4 2.1 5.6e+03 -2.0 0.0 31 51 884 904 877 906 0.79 3 4 3.1e-31 8.1e-28 96.8 0.0 3 77 1135 1210 1133 1212 0.96 4 4 1.6e-30 4.1e-27 94.5 0.1 3 76 1430 1504 1428 1507 0.96
Sequence Information
- Coding Sequence
- ATGCAGCCAACCGCACCGCAGAGCACGGGAGGTGGACCTGATATGGACCTCCCCACCGTACAGTCCATGGATTGGGTGTTCCAGAACAAGCAGCTCTACTTCCTCGCGCAGTATCTCGCACAGCAAGCTGAAAAGAAGGAAAAACTATCGACCACAGCCGCCAGCATGGACGGGTTGTTGAACGCCGCAGccggcaccaccaccaccgccaccGCCAACGCCACGTCCCCGCTGATGAGCGCCGTCCTGGAGCAGAACGGCGTTACGCCGCCGTCCCCCTCGACGACGCCCCTGTCCGAGGCGGGCAGCACCAGCGGGAAGCTGCTGATGGACAGCAGCCCGGATAAGCCCGCCAGCCTGGACGGCGATGCCCGGCTGGACCTGCTGCGCGAGGTCAAGGCGCTgaccatcaacaacaacaacaacagtagcagcaacaacaacaacaaaagcagTAGTGACAGCTGCAGCAGGGTCAGTCCCAGTCCCGACAAGGACGAAAGTGGGTTAGATGGTAGCGAACAGGCTAGCAGTAACGACAAAGGCAGCAGTAACGTGCACTGTAACGCAAGTAACGCCAACGAAAGCACAAACAGCACGTCGAAtaacagcagcagtagcagtagTAACGTCGAGGCCAAGGAAGGTGACTCCAAGGAGACCGAAAGCCGGACGACCAGAACGCTGGCGGAGGAACTGTCGGCGAAAAATAGAGAGgtatGTATAGTAAACTCCATGGCAAACGTAAaagtaaacaacaacaacaacaacaacaacagcagcgggagcgatgacgatgacgactgCAAGATATCGGCCCTGTTCGAGGAAGTGGCCCGCCTGCGGACGGCCATCGCCAACATCCAGGAGTCGCACAACGTGCAGATCCAGCGGCTAGAGGACCGCCTCGAGGAGAAGCGGCAGCACATCGTGCGGTTAGAATCTCGCATCGAGAAGCAGCAGGACTTTGACGATCTGAAGAAGGAAAACAACATTCTCCGATCGGTCGACCTGAGCACGTCGCACGACTCGAAGCAGTTCCAGGAACTGCTGCTCGAACGCACCAAAGCCCTGGCGGCCCAAACCGAGGCGATCAAGTCGTCCAACTCCGAAGGATCTCCGTCGAGCGGCCAGCCGAAGCCCGCTTCGTCGCCAGCAGCGACGAGCAGCTGCAGCACCGCCACGACCACCATCCCCACTCACGCTGCTAACGCTTGTAACGCTAGTAACGACCTCCTGCCTGTCAAcaacagcagcggcagcagcagtaATGGCAACGCCGTTAGCACTagtagcattagcattagcacgCCCGCAGCAATCAGCACAACGGCTGCaagtaacaacaacaacatcaacagcaTCAGCAACAGCTTTGTCTCGAGTCGGAGGCCCAGCGTGACGCCGTCACCGTCGGCCATTGGTCCGCTGGTGGGCCCTCCGGCCCACGTGATCTCCGGTAGCAATAGCCTAGCCCAGCTCAGCTCCTTCCTTCCGCCTCCGTTGCAAAACGTTGAACAGTTTGGCTCGTTTCTGGGTGAGGAGATTGTCAGCACCTGGCGGCACGGTCTGGAACTACCCCCTCCACCACCGGGCCTGGCCGCGGCAGCAGTCGCCGCCGCCGCACGCAACCATTCGCAACAGTTACTAATGAACCACAACCAtcatcctcctcctccacctccCACAGATCTGATTCACCACGAGCAGGACAAGGCTAGCTCCCACCATGATAACAACTCCTCGAGTGCGAGTACACCGATCCTGCAGGAGAGCTCCCGCCACGACGAGCTCATGAACGGCGGTGGCCTGACCCCGATGCGGATGTCCAAGAGCCCGCTGGAGGACAACAACAACACCCTGCTACCCCTGCCAAACACCGGCCCAAGCCTGATACAGGGTCTGCCGTTCCAGTTCCAGGAGCGCGGTCACTTCCGGTTCGCCGAAGACCTCCAGCTGCCGCCCGGCGCGATGGTCGGCCGCCTCGGCGACTCGCTCATCCCCAAGGGTGACCCCATGGAGGCCAAACTGCAGGAAATGCTCCGCTACAACATGGACAAGTACGCCAACCAGAACCTGGACACGCTGCACATCTCGCGGCGCGTCCGGGAGCTCCTGTCGGTGCACAACATCGGCCAGCGCCTCTTCGCCAAGTACGTGCTCGGCCTGTCCCAGGGCACCGTCTCCGAGCTGCTCTCGAAGCCCAAACCGTGGGACAAGCTGACCGAAAAGGGCCGCGACAGCTACCGGAAGATGCACGCCTGGGCCTGCGACGAGAACGCCGTCCTGCTGCTCAAGTCGCTGATCCCGAAAAAAGGTAAAGAACCCGGAATGCCATCGTTTGGCCGGCCCGAGGGCTCCGACATGAACGACGACCGAATCCAGCACATTCTCTCGGAGGCCCAATCGATGATCAAGCGGGACCCGCCGCCGGGTCCGCACCACCCGCATCCGCACCCGCAGCTGCACCAGCAGCTCCAGCTGCAGCAGCAACTGCAGCTCAACTCGCTGGACGACTCCCAGCACAGTGATAACGACTCCAAGTCGCCGCACAGCCGGGACGTCCAGTCGCCGTTTGCCAAAGATTACCTGAACCGACGGGCCGCGATGAAGAAGTTCAGCGACAACAACGACGACATCCCCCAGGACAAGATCGCCAAGATCTACCAGGAGGAGTTTTCGAAGCTGATCAGGAGTCCGCGCGAGTTTCCAAATTTCCTCTTCCCGCACTTCCTCGGCGGTGGCATGCCACCCATGGAGCGCCCAGCCCAGGACGACAACATCCGGATGGCGCTGGAGGCGTACCATCGCGAGCTGGCCAAGCTGCAGCAGAATGCCGCAGCTGGAGCCGGCATCCCCAGCATGCCAAACATCTCCAACCTGCCCAACTTCCTGGCGTTGCACCAgcaacaccaacaacaacagcagcagcagcagcaacaagccGCAGCTCAACAGCAACAACCCCCTCACCATCCGACCGGACTCAACGGCTCCGTTCAGGATCTCTCCCTCCCAAAGGAGAAGCAGATGGCTGCCGCCGGCGGCAAGCTGAACGGCTCGATGACCGACCTCGAGAGCGAAATCGACGCCGCAAACAAGGAGGTGGACGACGCCATGAAGCACAGCGCGTTCAGCATGGTCAAGCCCAAACCCGAACCGGGCACGTGCACTCCCACCACCACGGCTTCGTCCGCCCCGAGCCCCATCAGCAACAGCATCCTGCCACCGGTGATCGCCCCGTCCGAGGAGTTCTCCGTGTCGGCCAGCCCGCTCCAGCGGATGGCCTCCATCACCAACTCGCTCATCACGCAACCTCCGGTCACGCCGCACCACTCTTCGCAGCAGCGACCGCTCAAAGCCATCCTGCCTCCGATCACTCAGCAACAGTTTGATCTCTACAACAGCCTAAACACCGAGGACATTGTGCGCCGGGTCAAGGAATCCCTCTCCCAGTACTCCATCAGCCAACGCCTCTTCGGCGAGTCCGTGCTCGGCCTGTCCCAGGGATCCGTGAGCGACCTGCTCGCCCGGCCCAAACCCTGGCACATGCTGACCCAAAAGGGCCGCGAACCGTTCATCCGCATGAAGATGTTCCTCGAGGATGACAACGCCGTGCACAAGCTAGTCGCCAGCCAGTACAAGATCGCGCCGGAAAAGCTCATGCGAACCGGCAACTACAGCGGAACGCCCCAAATCCCCGGCATGATGGTCAAAAACATGCCCCCGATGCCCAAGATGCTCAGCGACTCCATCAACAAGCTCCAGCAAGACCAAAAGACGCTCCTCCAGCTGCAAATGTCCCAGATGCAGCAAATGCCACCCACTTCCCAAGCGCAGCAAATGCAACAGCACCAGCAGCAACTCCACCAACAACAACTCGCAGCCGCCGCCGCTGCCCAGCATCAAGCCCAACAAGAAGCCGCTgcggcagcagcggcagccgcCGTTCGCCAACCCCCCTCCTCCCAACCATCCCCCGTCCCCAGTCAAACCTCCCAATCCAGCCGGCAGCAACCATCGCCGCAAACGATGCTGCTAACCCCGCCCGGAATTCCCCCGCAACACGCCATCACGCTCCAAACGCCCCACGGAGGCGGTGGAGGTGCCCCCTCGGACAAAAAGTCCTCCTCCATCATGATGGGTATCCACTcgccccagcagcagcagcagcagcacacccCGCCTTCGTCCGGCCAGCCCGGACCGCCGCCGGGGGTGAACTCGATGCGCGGAGCGCTGCACCAGCACATCTCGCCGACCGTGTACGAGATGGCGGCGCTCACCCAGGACCTGGACACCCAGGTCATCACGACGAAGATCAAGGAGGCGCTGCTCGCGAACAACATCGGGCAGAAgATCTTCGGCGAAGCCGTTCTCGGTCTTTCGCAGGGATCCGTCTCGGAACTGCTCTCCAAGCCTAAACCCTGGCACATGTTGAGCATCAAGGGCCGGGAACCGTTCATCCGGATGCAGCTGTGGCTCAGCGATTCCAACAACGTCGAGCGGCTGCAAATGCTCAAGAACGAGCGACGCGAAGCCAGCAAACGGCGAAGGTCAACGGGCCCCGGAGCGCAAGACAATAGCTCGGACACCAGCAGCAACGACACGTCCGAGTTTTACCACTCAAACTCACCCGGACCAGGCTCGGTCGGATCGGCCGCGGCTCCTCCCAACAAGAAACAACGCGTGCTGTTCTCCGAAGAGCAGAAGGAAGCGTTGCGGTTGGCGTTTGCGCTGGATCCGTACCCGAACGTGCAGACGATCGAGTTTTTGGCGACGGAGCTGGGTCTTTCGACGCGAACCATCACCAACTGgttccacaaccaccggatgcGACTGAAGCAGCAGGTCCCGCACGGGCAGCCCTCGGAGCCGATTCCCTCGCGGGAGAACCAAACCGGAGCGCCGTTCGATCCGGTTCAGTTCCGCGTGCTGCTGAGCCAACGGTTGATGGAGATCCAGAAGGAGCGGCTGGGACTGAGTGGGGTTCCGCTGCCGTACCCGCCATACTTTGCCGCCAACCCGAACCTGGCGGCGCTCATCGGGCGAGGGTTCATCCCCGGCGATGTGGACCTGGCCGCGCTCAACAAAGCCGTCAGCGAGCAGATGAGCGGGCTGGACCTGTCGATGCCGTCGTCGGTGAAGCGAGAGGGCGAAGAGGATTACGAAGAGGACGGTGACCACGACGGGGAGAGTCACGTTTCGGACTCGGAATCGATGAACGACAACCGGGGCGGTGACGGAACGGACGACCAGCACTCGGTGTCGGGCCTTTCGCTGGCGAGCCTGCACGCCATGTCGCGGATCAGCCGGAGGAAGCCGGCGGCGCCGCAGTGGGTCAACCCGGACTGGCAGGCCGACGACAAGAAATCCAACATTCCAGGCGGTGAAAAGAAGGACGCCGCCGACATCATCAACGGCGTGTGCGTGCTCCAGCCGGACAACGTGCCATCGGTGCAGCAACGGTTTGTTGCGGCGATGGCGGCGGCGGCTGCGGCCGTAGCAGCGGCTGCGTCCGGCAGCGATCACGACGATCAGGACGATGCCAGATCGACGCACTCGAGGCAATCGGGGGAGGAGCAGCGAGAGGCTGGTGAGGAGGAGGGTCGTGCGGAAAAGGACGCTTCCGagtcggcggcggcggctgcgACCACGGTGGAAAACAGTGGTGACAACTCCGAGAAGGAGGTCCAGGTCAAGACGGAACTGATGGAGGAGGGTGGAGGTGAACGGTGGGAGTATTAG
- Protein Sequence
- MQPTAPQSTGGGPDMDLPTVQSMDWVFQNKQLYFLAQYLAQQAEKKEKLSTTAASMDGLLNAAAGTTTTATANATSPLMSAVLEQNGVTPPSPSTTPLSEAGSTSGKLLMDSSPDKPASLDGDARLDLLREVKALTINNNNNSSSNNNNKSSSDSCSRVSPSPDKDESGLDGSEQASSNDKGSSNVHCNASNANESTNSTSNNSSSSSSNVEAKEGDSKETESRTTRTLAEELSAKNREVCIVNSMANVKVNNNNNNNNSSGSDDDDDCKISALFEEVARLRTAIANIQESHNVQIQRLEDRLEEKRQHIVRLESRIEKQQDFDDLKKENNILRSVDLSTSHDSKQFQELLLERTKALAAQTEAIKSSNSEGSPSSGQPKPASSPAATSSCSTATTTIPTHAANACNASNDLLPVNNSSGSSSNGNAVSTSSISISTPAAISTTAASNNNNINSISNSFVSSRRPSVTPSPSAIGPLVGPPAHVISGSNSLAQLSSFLPPPLQNVEQFGSFLGEEIVSTWRHGLELPPPPPGLAAAAVAAAARNHSQQLLMNHNHHPPPPPPTDLIHHEQDKASSHHDNNSSSASTPILQESSRHDELMNGGGLTPMRMSKSPLEDNNNTLLPLPNTGPSLIQGLPFQFQERGHFRFAEDLQLPPGAMVGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKGKEPGMPSFGRPEGSDMNDDRIQHILSEAQSMIKRDPPPGPHHPHPHPQLHQQLQLQQQLQLNSLDDSQHSDNDSKSPHSRDVQSPFAKDYLNRRAAMKKFSDNNDDIPQDKIAKIYQEEFSKLIRSPREFPNFLFPHFLGGGMPPMERPAQDDNIRMALEAYHRELAKLQQNAAAGAGIPSMPNISNLPNFLALHQQHQQQQQQQQQQAAAQQQQPPHHPTGLNGSVQDLSLPKEKQMAAAGGKLNGSMTDLESEIDAANKEVDDAMKHSAFSMVKPKPEPGTCTPTTTASSAPSPISNSILPPVIAPSEEFSVSASPLQRMASITNSLITQPPVTPHHSSQQRPLKAILPPITQQQFDLYNSLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGTPQIPGMMVKNMPPMPKMLSDSINKLQQDQKTLLQLQMSQMQQMPPTSQAQQMQQHQQQLHQQQLAAAAAAQHQAQQEAAAAAAAAAVRQPPSSQPSPVPSQTSQSSRQQPSPQTMLLTPPGIPPQHAITLQTPHGGGGGAPSDKKSSSIMMGIHSPQQQQQQHTPPSSGQPGPPPGVNSMRGALHQHISPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNVERLQMLKNERREASKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPGSVGSAAAPPNKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLATELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPIPSRENQTGAPFDPVQFRVLLSQRLMEIQKERLGLSGVPLPYPPYFAANPNLAALIGRGFIPGDVDLAALNKAVSEQMSGLDLSMPSSVKREGEEDYEEDGDHDGESHVSDSESMNDNRGGDGTDDQHSVSGLSLASLHAMSRISRRKPAAPQWVNPDWQADDKKSNIPGGEKKDAADIINGVCVLQPDNVPSVQQRFVAAMAAAAAAVAAAASGSDHDDQDDARSTHSRQSGEEQREAGEEEGRAEKDASESAAAAATTVENSGDNSEKEVQVKTELMEEGGGERWEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00401600;
- 90% Identity
- iTF_00401506;
- 80% Identity
- iTF_00400460;