Cpip011716.4
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- kn
- Assembly
- GCA_016801865.2
- Location
- NC:213536675-213610133[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-231 6e-228 758.4 0.0 10 385 20 411 11 415 0.97 2 2 1.9e-08 7.2e-05 21.8 20.8 422 535 414 531 410 545 0.65
Sequence Information
- Coding Sequence
- ATGATGTTCGGCCTTCCGCCATCCGGGGCCGACATGAACCAGCCGCGCGGCCCGATGACCTCGCTCAAGGAGGAACCGCTCGGAGCCCGCGCCTGGATGCAGCCTGCCGTCGATACCACCAACTTGGGCATCGGGCGGGCCCACTTTGAGAAGCAGCCTCCGAGCAACCTGAGAAAGTCCAACTTTTTCCACTTTGTGGTGGCGCTGTACGACCGGGCCGGCCAGCCCATTGAGATCGAGCGGACGGCCTTCATCGGGTTCATCGAGAAGGACCAGGTAGAATCGGATGGACAAAAGACTAACAACGGAATCCAGTACCGGTTACAGCTGTTATACGCGAATGGTGCCCGCCAGGAGCAGGACATCTTTGTGCGGCTCATCGATTCCGTTACGAAACAGGCAATAGTGTACGAAGGTCAGGACAAGAACCCGGAAATGTGCAGGGTGCTACTGACCCACGAAGTGATGTGCAGCCGATGCTGCGACAAGAAGAGCTGTGGCAATCGCAACGAAACACCGTCAGATCCTGTGATTATAGACCGatttttccttaaatttttcCTCAAGTGTAACCAGAACTGCTTAAAGAATGCCGGCAATCCGCGCGACATGCGACGATTTCAAGTAGTGATAGCGACCCAGGTCTCGGTGGACGGCCCGCTGCTCGCCATCTCGGACAACATGTTCGTGCACAACAACAGCAAGCACGGCCGCCGGGCGAAACGGCTCGATCCCGAAGGTACGGGAAGTTCTCCGTTGGCAATCTCGGGCCATCCGCTGGCCCCGGACAGTACGTACGACGGCATCTATCCCCCGCTACCCATGGCAACGCCCTGCATCAAGGCGATCTCGCCGAGCGAAGGCTGGACCACGGGCGGCGCGCAGGTCATCATCGTCGGCGACAACTTCTTCGACGGGCTACAGGTGGTCTTCGGGACGATGCTGGTGTGGAGTGAGTTGATAACATCGCACGCGATACGGGTCCAAACGCCGCCGCGGCACATACCCGGTGTGGTCGAGGTTACGCTGTCCTACAAGAGCAAACAGTTCTGCAAGGGATCGCCGGGCCGGTTTGTCTATGTCTCTCTAAGTGAACCCACCATCGACTACGGTTTCCAGCGACTTCAAAAGCTAATCCCGCGACATCCGGGCGATCCGGACAAGCTCCCAAAGGAGATCATCCTGAAGCGAGCCGCCGACCTGGCCGAGGCGCTCTACTCGATGCCCCGATCGCCGAACGGTTCCTCCGGCTTCAACTCGTACAGTGGCCAGCTGGCGGTCAGCGTCCAGGACGGCACGGGCCAGTGGGCGGAAGccGACGAGTACACCCGGGCCCAGAGCAGCAGCGTGAGTCCCCGGGGAGGGTACTGCAGCAGTGCGTCGACGCCGCACTCGTCCGGCGGGGGGTCGTACGGCAGCAGCAACGGGTACGCGACCGCGTCCAACATGAGCGGGCTCACGTCCTCGCCGGCCAGTGTCTTCAACTCTTCGTCGATCACTTCGTCGGCCAACCTGTGGCACTCGCAGCTGGTTCCGTCGCACGCCGGGTACACGGCCGCGGCCGCTGCCGCCGCCACCGGTTCCCACCAGTTCTGGCACGCCTCGTCCACGGCGTCCTCTGTAGCGACTGCGGTTTAA
- Protein Sequence
- MMFGLPPSGADMNQPRGPMTSLKEEPLGARAWMQPAVDTTNLGIGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDQVESDGQKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVDGPLLAISDNMFVHNNSKHGRRAKRLDPEGTGSSPLAISGHPLAPDSTYDGIYPPLPMATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRSPNGSSGFNSYSGQLAVSVQDGTGQWAEADEYTRAQSSSVSPRGGYCSSASTPHSSGGGSYGSSNGYATASNMSGLTSSPASVFNSSSITSSANLWHSQLVPSHAGYTAAAAAAATGSHQFWHASSTASSVATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00401505;
- 80% Identity
- -