Cpip009405.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culex pipiens
Gene Symbol
Arid5b
Assembly
GCA_016801865.2
Location
NC:140957746-141081226[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.4e-12 5.5e-09 36.8 0.0 2 89 587 667 586 667 0.91

Sequence Information

Coding Sequence
ATGGATATCAAGGTCGTCGGCGTGGCATGCGGTTACAAGGGCCCGTACACGTTCTACAAGGGTGTCAAGATCACCTTCGCCGCCGGATCGGAGTCAACCTCATCGGCGTCGTCCTCGTCAGCGTCCACACCAGCACCCCCAACAGCACCACCACCTTCCGCAACCGGCACTGGAACCTGCTCCACGAGCTCTTCATCCACCTCCACCTCACCGGTTCCGTCGACGAGGCCTGGCACGCCACCGTCCACCACTGCCGGAACAACTGCCGTGCAATCCGACGAACTTGCGGCGTCGACGACGACGGGCGAAGATCCTAGCATTAGCAACAGTAGCAGCAGTTGTAGTTCcagcaacaacaataacaacaacaacagcagtagTAGTAGTAAGGGGCAAAACGCAAAGCCAAAACAGACGCAACGAAAATGTGTCAGTGAAAATAACAGCACTGCCAGCAGCGGGACGGCCGTGGCCACGACCGGGGTGACCGGTGAggacggtggtggtggtggtgtgaaTAATTTATGTAATGCCACAACAGCTACGGCGGAAAAAGACTGCCTCCGGCCGCTGGTGCTAGCGCTGGGCGACTGCTTCCCGGTGCGGCCCTGGTCCGACTCACCGATTGCGTGCCTCGCCGAGCTGCGGATGGTGTGGAAGGACCGCAACGAGCAGTGCCTGCTGATCGCCCTCCGGCTCTTCTTCCTGCCCGAGAACACCCCGGCCGGCCGGAACTGCCACGGCGAGGACGAAGTGCTCGCCATCTCGGACAAGGTGATTGTGCGGGCGGACGACCTGCTCGGCTGGATCGCGGCGGACCTCGAGTGGAACTGGGGCCTGCGGACGACGTACGACGAGGAGAGCGCCCGGGACGTGATGACGACGACGCGCCACCTCAGCAAGCACTCCTCGCTGGACTTTGCCGACGTGGACAAGGAGAAGCACGCCGCGGAAAACGTGGCGTCCAAAGTGGCGGTGCTGAGCTTTTCCCGCTACTGCCGGTACCGGGCCGTCCAAAAGCGTCTCGAGGTGGTCCACGATGACTGGCTGCGGAACAAACTGGTGGAGACGCTCAGCGGCTTTGTGGCCACCACGCCCAACACCCGCGTCATGTTCTGCAAGGACACCTTCGACTGTCCGGAGCTGGAAACGCACGAGCTGCTGTGCAACCACCTGGCGCCGAAGCTCAAGGGCCGACCCCGGGGCAAGCGGAAGAAGACCCTGTCcgattcgtcgtcgtcgcagttTGTCAAAAAGGAGGGCGCCAACTCGGAGGAGAGCGAGTCGAACGATTCGGACGCGTCGGACTACTCGTACAGCAAGGTCTCCCCATCGAAAAAGGTCAACCTGCAAACCACTCCCCGCTACAACCCCCGTCCAGCTCGGGCATCCGGTGGATCGGCGGGTAAGGGGGCGGTCGATCCGATTGCAATCCCTGTGGACCCACTGCCTCCACCGCCCGTCAAGCAGAAGCATGCCAAGGGCAAGCAGACGCCGCCCCAACCCACGGCTGGTACGGCCGGCAAGGTACGCGGTCGCAAGGGACGACCGGGCCGCAAGCCGAAGGGCTTCAACCGGAAGGCGGACGAAAGCGAAGCGGGCGAGGAAACCGAGGACACCGAGCTGGGCACTTCCGTCGGGGACGAGGGGGACGTGGAGAAGATGGAGGGCGAGTATGCGTTCGACGAGGAGGACGAGCAGCGTGACGCGGAACGGCCGAGCAGTCTGTTCCAGGTGAGCGACGGGATGGCGCCGGATCAGCGGGACTTTTTGCAGCGGTTGCAGGAGTTTTTGGACCCGAAAGCGCTGGCGTATGCGAATAATCAGGTGGCTTCGTTGAGGGGAGTCAACCTTTACCTCATCTACACGCGCGTGTTGAACGCCGGTGGCTACGCAGAACTCACCACCCGCGATCAGTGGACGACGCTGCTGGAGGGCACCGGTGGCGAGAATGGCGCCATGACCAAGCGTCGGTACGAGCGAATTCTGCTACCGTACGAACGGCACCAGCGAGCGATCGCCGAAGCTGTGAAGAAGGAGATCGAGGAGGAGGAACGTGAGGGTGAGACCGGCCACGAGAGTCAGATATCGCCAACGGATGGTGGGGTGGTGGAGGTTAAGGTGGAGAAGGTGGAAAAGCGGGAGGAGCAGGAAGATGTTAAGGTGAAGATCGAGTGCAAGGAAGATGAGGTGGTGGCGTCGGTTGAGGTCAAGAAGGAGTTTGAGAAGGACGCAGGTGGGGCGTTGGATTTGTCAAAGGACGATTCCGTGGAAGTACAAAGTAAGGGGAAGGCGATATCTCCGCTGTTGGAGAATAACAGCAGTAATGGTAGCGTTGGGGTGACCGGGAGTCCGAACGCCTCGGTGCACTTGGGAATGTCGCCGGTGTCGGTGCCGTTGACGGTGATTGTTCGGCCGAACATTGACGAGAAggacccgtcgtcgtcgtcgcagatCCAGATCAATCAGCCGCACACGACGATTACGGTGCACCAGACGACGATCCACCCGCAGGGCAATCAGCAGGCGAACAGTCAGCAGATCAGCGGACAAAGTCCGCAGCACATTACGAATCAGATTCAGATCACGAACCAGATCCAGATCCAGCAGATTACGGTGCAGTCGAGCGACAAGGGAGCGAACGGAGGGGAGAGTCCGCAGTTCAAGTACAGCTTCAAGCAGGACAAATCCGGGCAGGAGATCAACATCGAATCGCCGTCGGCGTCGGAGAACTCGAAGGGATCGTCGGTCAACTTTGAGAACAACATCAGCGCGACGCTGTTCCCGCTGAGTCGACCTGCCGATCCGGATTTGACCATCAAGGAGGTTTCCGTTTGCCCAACGAGTGGAACCGTTTCAATCAGCACGGCCAGTACGAATCCACCGGCGCCGGTGGCTTCCAAGACGTCTTCGTTGCGACACGTTCGCATGAAGGCCGATCGCAAGTCGTCCTCGACGACGGGAAGTGTGCCAAACATCGCGGCAGCGGCTGCAGCCACCTCCAGTTCCAACAAACCTTTCGAAAAGGAGAACATTCCGATGATGGCGGGCAGCGCCGCTGCCGCCAGTCTGTTTGGCGATCAGAACCTCACCACGATCACGCCGATTGCTTCGAGTTTGCTGAACAGTGCGGTCGGCGCTGCGGCGCTGGCAAGTCTTGCTTCCAGCTACGCTGGACTGACCGGATCCGTCGGCGAGGGCAACACGCCTAAGGTTCTTCCCGCACCAACCGAGGTGATCGACCTGGTGGACAGTGACAACGATGACGAAGAGGACGCTGCGGTGGCGACCGCCGCGGCCAAACAGGCCGGCCTGTCGATCCGACCGATTCCTTCGCTGCTGCCGCCGATGAAGAAACGCAAGCTGGATATTCTTCGTGAAGGTGGTCTGGAGGTGACTCCGATCTCCAACGGGGCGAGCATCTTCTCCGCCATTACGCAGCACAGCCCGAAGGCGAGTCCGAACCCTATGCGGATCAACATCACGGCGGAGGTTAGTCCGCAGCGTAAGAGTGGCGGAGGTGGAGGTGGTGCCGATCGCAAGTACATTCCCACCCCGCTGGACTGCCAGACGCAGGGAATGTACGCCAAGACGGGACAGATCTTTGGCGATCCGAAGGCAATGGGCCTTCCAAGCAACAGCATGCCGGTGAAGCCTGCGGCGGCTGCGCCGCCCACCGACTTGCTTGACCTGACTGGATGTCGAAGTGGCAACATGATCCCAATGGGACTGGACTTTACGCCGTCGAACTCGAGGCAGCGGGCTCAGCCCGCGAGTCGCGTGCCTCGGACGGCACCAAGTTTGCAGATTACACTGGTTCACGCGCCGAATCAGCAGCAGGCTCCTCCGCAGCCTCAACACCAGCAATCTGCTGGAAACTCCCGCAAGAAACCGTTCGAAATCGTGCCATTATCTGCCGCCAGCGGCACGCCGCCGAAAGACCCCAGTCCGCAGATCTCCCTAGGACCGTCTTCTTCAAGCTCTTCGGCGTCCAGTTCCAACGGAACCGCCGGTACCAACCCCAACTCATTGCTCGAGACAGGCCTGCTGCTGGCGAACCTGCAGAAAGTCAACCCACTGCTCGTGGCCAGCATCCTTTCCTCCTCCGGCCTCTCCAAGACCTCCATCCCAGGCCTGACCCAACTCCTCGGACAACTCACCGAGCAACCTCCGGTCGCACCCAAGAAAAACACCCGCCGAAGGTCCAACTCACAAGCTCAACAGGCTCAGCTATCGCAACCCCCTCCACTCATCCCAACTCCCCAATTCTCGATGCCCTCCCCGCAGCATCCACCCCCCTCCGAATCCCCCTCTCTCAGCCAGCAAATCAAACTGCTGCAGCAGGTCCAgctccagcagcagcaaaaggCCGCCGCCGCCCACGAGCAGCAGCAAAAAGCAGCCGCTGCTGCGGCGGCCGCCGAACAAAAGCGCCTCCAAGAGCAGAAGCAAAAGCAGCAACAGCTGCAAATGCTTCAGCAACTCCAGCAGCAGTCAACCCGCGTCGCGTCCAACTCTTCGGCGACCTCGTCGTCGCCGGCGTCGACGTCCTCCGCGCCACCCAACACGCAGCAAGCCGCCTTCCCCTTCGACCCGCTCTACCTGTCGGCGATCTACGCGAACCCGAGCCTCTACCTGCAAGCGCTCAGCCCCGATCAGCTGTTGGCGTTCTACAAAAATCTGCCCAACATGGCGGGAGGAGGTGGTGGCGGGGCGACGATGCCACCCACCAGCAAGAGCTAG
Protein Sequence
MDIKVVGVACGYKGPYTFYKGVKITFAAGSESTSSASSSSASTPAPPTAPPPSATGTGTCSTSSSSTSTSPVPSTRPGTPPSTTAGTTAVQSDELAASTTTGEDPSISNSSSSCSSSNNNNNNNSSSSSKGQNAKPKQTQRKCVSENNSTASSGTAVATTGVTGEDGGGGGVNNLCNATTATAEKDCLRPLVLALGDCFPVRPWSDSPIACLAELRMVWKDRNEQCLLIALRLFFLPENTPAGRNCHGEDEVLAISDKVIVRADDLLGWIAADLEWNWGLRTTYDEESARDVMTTTRHLSKHSSLDFADVDKEKHAAENVASKVAVLSFSRYCRYRAVQKRLEVVHDDWLRNKLVETLSGFVATTPNTRVMFCKDTFDCPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSSSQFVKKEGANSEESESNDSDASDYSYSKVSPSKKVNLQTTPRYNPRPARASGGSAGKGAVDPIAIPVDPLPPPPVKQKHAKGKQTPPQPTAGTAGKVRGRKGRPGRKPKGFNRKADESEAGEETEDTELGTSVGDEGDVEKMEGEYAFDEEDEQRDAERPSSLFQVSDGMAPDQRDFLQRLQEFLDPKALAYANNQVASLRGVNLYLIYTRVLNAGGYAELTTRDQWTTLLEGTGGENGAMTKRRYERILLPYERHQRAIAEAVKKEIEEEEREGETGHESQISPTDGGVVEVKVEKVEKREEQEDVKVKIECKEDEVVASVEVKKEFEKDAGGALDLSKDDSVEVQSKGKAISPLLENNSSNGSVGVTGSPNASVHLGMSPVSVPLTVIVRPNIDEKDPSSSSQIQINQPHTTITVHQTTIHPQGNQQANSQQISGQSPQHITNQIQITNQIQIQQITVQSSDKGANGGESPQFKYSFKQDKSGQEINIESPSASENSKGSSVNFENNISATLFPLSRPADPDLTIKEVSVCPTSGTVSISTASTNPPAPVASKTSSLRHVRMKADRKSSSTTGSVPNIAAAAAATSSSNKPFEKENIPMMAGSAAAASLFGDQNLTTITPIASSLLNSAVGAAALASLASSYAGLTGSVGEGNTPKVLPAPTEVIDLVDSDNDDEEDAAVATAAAKQAGLSIRPIPSLLPPMKKRKLDILREGGLEVTPISNGASIFSAITQHSPKASPNPMRINITAEVSPQRKSGGGGGGADRKYIPTPLDCQTQGMYAKTGQIFGDPKAMGLPSNSMPVKPAAAAPPTDLLDLTGCRSGNMIPMGLDFTPSNSRQRAQPASRVPRTAPSLQITLVHAPNQQQAPPQPQHQQSAGNSRKKPFEIVPLSAASGTPPKDPSPQISLGPSSSSSSASSSNGTAGTNPNSLLETGLLLANLQKVNPLLVASILSSSGLSKTSIPGLTQLLGQLTEQPPVAPKKNTRRRSNSQAQQAQLSQPPPLIPTPQFSMPSPQHPPPSESPSLSQQIKLLQQVQLQQQQKAAAAHEQQQKAAAAAAAAEQKRLQEQKQKQQQLQMLQQLQQQSTRVASNSSATSSSPASTSSAPPNTQQAAFPFDPLYLSAIYANPSLYLQALSPDQLLAFYKNLPNMAGGGGGGATMPPTSKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-