Cpip009995.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- -
- Assembly
- GCA_016801865.2
- Location
- NC:161896363-161900282[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-13 5.2e-10 40.1 0.0 16 68 5 57 1 72 0.88
Sequence Information
- Coding Sequence
- ATGGCGTGGGAaaaacagaCGCCGTTGATGCGGTTGCCGAAGATCACAGGTCGAGATGCGGATTTGCACCGATTGTTTTCGATGGTGGTGACCCGCGGTGGTTGGTTGAAGGTCAATTCCCGCAAGGACTGGGACGAGATTATAGAGGAGATGGCGCTGAAGAAGAGGAAGAGATTGACAACGAGAAGCGGCATAATTGAAGGTAGTCAGCAGCGCTATGTTCCGGAAGTGATGAGGGGACAGTGTGGGATGTCCTGCGAGTTGTATAAGTATCCCGAGTACGATGAGCTGATTTTGTCGTTGTTGACGAACGAGCAAGACATCTCAGATCAACCAAATCCTCGTCCGCGAACGCTCGACCCGCGACGGCGCAGTCGAATTAACTTGGACGACGAACTGGCAAAATCTGTatcattctcgaaggaggacgaAGTGTTGGAAAACGATTCCGGTTCCAAGGGCCTCATCAGCCTCAAGTACCGAATGCGCTTCCATAACCGGAAACTACCCGTTCAGGCGCTTAACTTCCCAGCCGGAAAACGTCGGCttcccttcccgaatcaacagccaatggccaactcctccaagcctgtcTTGATGAAGGCCGGCAACGAGACCACCCTGTTCTCTACATCGCTGTCGCGCGTCGAAACGTCCGTCCGAAACCGTCCAGCCTGGGGTcttcggaagtga
- Protein Sequence
- MAWEKQTPLMRLPKITGRDADLHRLFSMVVTRGGWLKVNSRKDWDEIIEEMALKKRKRLTTRSGIIEGSQQRYVPEVMRGQCGMSCELYKYPEYDELILSLLTNEQDISDQPNPRPRTLDPRRRSRINLDDELAKSVSFSKEDEVLENDSGSKGLISLKYRMRFHNRKLPVQALNFPAGKRRLPFPNQQPMANSSKPVLMKAGNETTLFSTSLSRVETSVRNRPAWGLRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -