Basic Information

Insect: Ctenicera cuprea
Gene Symbol: -
Assembly: GCA_958336395.1
Location: OY284493.1:36870025-36871815[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00028 0.032 16.3 0.1 2 23 301 323 301 323 0.97

2 9 0.021 2.3 10.5 6.5 1 23 329 351 329 352 0.95

3 9 8.5e-05 0.0095 18.0 1.3 1 23 357 379 357 379 0.95

4 9 0.00029 0.033 16.3 1.0 2 23 390 412 389 412 0.97

5 9 0.0064 0.71 12.1 8.8 1 23 420 442 420 442 0.98

6 9 0.00011 0.012 17.7 1.6 1 23 448 470 448 470 0.99

7 9 6.7e-05 0.0075 18.3 3.2 1 23 476 499 476 499 0.97

8 9 0.00022 0.025 16.7 0.6 1 23 512 534 512 534 0.95

9 9 0.0042 0.47 12.6 2.7 1 23 543 566 543 566 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00028	0.032	16.3	0.1	2	23	301	323	301	323	0.97
2	9	0.021	2.3	10.5	6.5	1	23	329	351	329	352	0.95
3	9	8.5e-05	0.0095	18.0	1.3	1	23	357	379	357	379	0.95
4	9	0.00029	0.033	16.3	1.0	2	23	390	412	389	412	0.97
5	9	0.0064	0.71	12.1	8.8	1	23	420	442	420	442	0.98
6	9	0.00011	0.012	17.7	1.6	1	23	448	470	448	470	0.99
7	9	6.7e-05	0.0075	18.3	3.2	1	23	476	499	476	499	0.97
8	9	0.00022	0.025	16.7	0.6	1	23	512	534	512	534	0.95
9	9	0.0042	0.47	12.6	2.7	1	23	543	566	543	566	0.95

Sequence Information

Coding Sequence: ATGGAAAGCAATTTGAGTAATACTGATATAGTGATCAAGCAAGAAGTCGAGGTTATTCCCGATCTAAACGTAGAGGATATTGTTAGTGGCACTGTTGATGTTAAAACTGAAGTTGAAGATACTGCTGAAGAATTGTATGAATCAAATAGCCTCAAAgttattacaacaaatttgtGTGAGAATGTGCAAAACCAGAGTGAAAAGACGAAGGAACTTGAACTAGCAACGGGCACGGAAATGTCTAcgcaaaagaaaataaaaagactggtgtataaaaaacaaaagaatgtgaaacACAAGtctcaaaatacaaaatatgagGATACTGAAATAGCTAACACGGCGAAGAAAATCTTAGTGGATGAAAAGCCAAATAATGGTAATAATAGCGATCCTGtaaaaaaagaagcaaaagacaCCGCCGAAATGATTACAGTGATCAAACAAGATGCAGAAGAATCAAACAGTTTATTGAATCAAATAAGTTGCAGAAGAACACGAAAATCAaatgaagttttaattaaaaatgaaaatttgtatcaaaatgaaaattcagTGGGTAAGACAAGTAAACGTAGTTTAAAAccttcaaaaattactaaaataaataaatctcgaAGAAGAAGTAGTAAGATTACTGCTGTtgtatcaaataaaacaaaaatgtcgcaaaagaataatttacgaaaaacacaaaaaatcaagACGACAGaagattcaaataaaaatacaaatggtGACTACATTAATTTAAGTGACGGCTCAGATAGTAAAGAATcggattttcaagaattttttggCACCGTTGAATCTAAAAAACGAAGATACAGACCTAGACAAAAACCTGAAATAACGGAAAAGGAAAAGGCAGAAAGGGAAAGACAGAAACTTGAAAGACGAACTTGCCAAATCTGCAATGCAGTGTTTGCTCTTCCAGATGGACTTCGAAATCACATACGATCCAAACACACATTTGAAAAACCATATTCATGTAAGTTTTGTGGCGAGCGGTTTTCTACTCGGAGTGCCCATTCGTTGCATCGCCGTCGACATCACGGTTTTCAACCCTTTTTGTGTAATTTGTGtggtaaaacatttttgcaaaagGCACATATGGAAATTCATATGCGAATACACATACCTTCAAAAGATAAAATTCGGGATGTTAAATGCAGTTTTTGTCCCAATGTGTACacttcaaaattaaacttaaaaaaacatattttaactaAACACACAGATCCGAGTGAGTGGAAGCACGAGTGCAATATTTgcagtaaaaagtgtttttcaacAACAGATCTTACCCATCACATGCGGCGACATAATGATGAACGTACATACAAATGTGTGATTTGTGGAAGgggattttttacaaaacagacCATGAATGTTCATTTTCGTACACATTCTGCCAGTACTGCTTTCAATTGTGAACATTGTTCGAAAGGCTATCGTAGTAATGAGGCTCTCCAGCATCATATGCTGAAGGTACATGGTATTGGAGAGGAAAAACTTGTTTCCGCTCCAAAACATTTCTGTCCTATTTGCAATGAAGGATTTCGTCAACGGGCTCGACTTGAAAAGCATCTTGTTATTCACGAAACTGGTGAAGAAGAATATCCATTCAAATGTGAAAAGTGCAATAAACAATACAAAGCTAGAAATTACTTTACTATACATATGTTGGATAAGCATAAAGAGTTTCTTGACGATACCTATTTTAAGACACATTTTAAACTTAGTACTGATGAAAATTATGCAAACTTTAATGAAGCTCTTGATGTTTAA
Protein Sequence: MESNLSNTDIVIKQEVEVIPDLNVEDIVSGTVDVKTEVEDTAEELYESNSLKVITTNLCENVQNQSEKTKELELATGTEMSTQKKIKRLVYKKQKNVKHKSQNTKYEDTEIANTAKKILVDEKPNNGNNSDPVKKEAKDTAEMITVIKQDAEESNSLLNQISCRRTRKSNEVLIKNENLYQNENSVGKTSKRSLKPSKITKINKSRRRSSKITAVVSNKTKMSQKNNLRKTQKIKTTEDSNKNTNGDYINLSDGSDSKESDFQEFFGTVESKKRRYRPRQKPEITEKEKAERERQKLERRTCQICNAVFALPDGLRNHIRSKHTFEKPYSCKFCGERFSTRSAHSLHRRRHHGFQPFLCNLCGKTFLQKAHMEIHMRIHIPSKDKIRDVKCSFCPNVYTSKLNLKKHILTKHTDPSEWKHECNICSKKCFSTTDLTHHMRRHNDERTYKCVICGRGFFTKQTMNVHFRTHSASTAFNCEHCSKGYRSNEALQHHMLKVHGIGEEKLVSAPKHFCPICNEGFRQRARLEKHLVIHETGEEEYPFKCEKCNKQYKARNYFTIHMLDKHKEFLDDTYFKTHFKLSTDENYANFNEALDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -